Pre_GI: BLASTP Hits

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Query: NC_009567:904922:914526 Haemophilus influenzae PittGG chromosome, complete genome

Start: 914526, End: 915257, Length: 732

Host Lineage: Haemophilus influenzae; Haemophilus; Pasteurellaceae; Pasteurellales; Proteobacteria; Bacteria

General Information: Strain PittGG is a non-typeable Haemophilus influenzae (NTHi) isolate recovered by Dr. Robert Wadowsky from the external ear discharge of a spontaneously perforated tympanic membrane of a child in Pittsburgh, USA who had been diagnosed with otorrhea. Causes respiratory tract infections primarily in children. A group of organisms that are either obligate parasites or commensal organisms found in animal mucous membranes. Almost all species require the presence of important growth factors found in the blood of their hosts, including either X factor (protoporphyrin IX or heme) or V factor (nicotinamide adenine dinucleotide (NAD or NADP)). This organism was first isolated in the 1890s during an influenza pandemic by Pfeiffer, and was originally thought to be the source of influenza, although later it was shown to be a secondary pathogen and may be synergistic with the influenza virus. This bacterium is one of the leading causes of meningitis in young children, and it may also cause septicemia, otitis media (inflammation of the middle ear), sinusitis (inflammation of the sinus cavity) and chronic bronchitis. It is highly adapted to its human host and typically lives in the nasopharynx and is a major cause of lower respiratory infections in infants and small children in developing countries (type 1b strain), although vaccine use has resulted in the decline of infections. The encapsulated organism can penetrate the blood and avoid both phagocytosis and complement-mediated lysis. All known strains produce neuraminidase and an IgA protease as well as fimbrial adhesins for attachment.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007146:1405459:141839814183981419135738Haemophilus influenzae 86-028NP, complete genomemodification methylase DpnIIB-like3e-141500
NC_014922:825396:839238839238839975738Haemophilus influenzae F3047 chromosome, complete genomeDNA methylase6e-141499
NC_012658:1405788:140578814057881406594807Clostridium botulinum Ba4 str. 657 chromosome, complete genomeDNA methylase6e-104377
NC_012590:2117027:214046021404602141245786Corynebacterium aurimucosum ATCC 700975, complete genomehypothetical protein4e-94344
NC_003485:579946:590462590462591250789Streptococcus pyogenes MGAS8232, complete genomehypothetical protein1e-91335
NC_008024:548165:561046561046561834789Streptococcus pyogenes MGAS10750, complete genomeAdenine-specific methyltransferase1e-91335
NC_009332:653474:663753663753664517765Streptococcus pyogenes str. Manfredo chromosome, complete genomephage DNA methylase2e-89328
NC_003485:1228149:123171712317171232472756Streptococcus pyogenes MGAS8232, complete genomehypothetical protein2e-89328
NC_012973:49208:485134851349211699Helicobacter pylori B38 chromosome, complete genometype II adenine methyltransferase3e-1375.5
NC_010546:1853825:185626218562621857116855Cyanothece sp. ATCC 51142 chromosome circular, complete sequenceprobable DNA-methyltransferase1e-1170.1
NC_008686:95326:110943110943111620678Paracoccus denitrificans PD1222 chromosome 1, complete sequenceDNA methylase N-4/N-6 domain protein1e-1067
NC_014314:69872:792407924080220981Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeDNA methylase N-4/N-6 domain-containing protein2e-1066.6
NC_015164:493159:523368523368524156789Bacteroides salanitronis DSM 18170 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein2e-1066.2
NC_010125:381711:393090393090393770681Gluconacetobacter diazotrophicus PAl 5, complete genomeputative modification methylase3e-1065.9
NC_011365:1103927:110848411084841109161678Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein9e-1063.9
NC_015711:4319648:433960343396034340313711Myxococcus fulvus HW-1 chromosome, complete genomeputative DNA methyltransferase2e-0963.2
NC_015063:1:166811668117325645Rahnella sp. Y9602 plasmid pRAHAQ02, complete sequenceDNA methylase N-4/N-6 domain protein2e-0962.8
NC_010175:398453:4104884104884116901203Chloroflexus aurantiacus J-10-fl, complete genomeDNA methylase N-4/N-6 domain protein3e-0962.4
NC_012032:398419:4104544104544116561203Chloroflexus sp. Y-400-fl, complete genomeDNA methylase N-4/N-6 domain protein3e-0962.4
NC_006582:883922:8929238929238941341212Bacillus clausii KSM-K16, complete genomeadenine-specific DNA methylase3e-0962
NC_015873:1119500:112830311283031129109807Megasphaera elsdenii DSM 20460, complete genomeDNA (Cytosine-5-)-methyltransferase3e-0962
NC_007297:1406796:141074714107471411598852Streptococcus pyogenes MGAS5005, complete genomeadenine-specific methyltransferase4e-0962
NC_008023:1426687:142909014290901429941852Streptococcus pyogenes MGAS2096, complete genomeAdenine-specific methyltransferase4e-0962
NC_008021:1401249:140520014052001406051852Streptococcus pyogenes MGAS9429, complete genomeadenine-specific methyltransferase4e-0962
NS_000195:526983:528804528804529706903Candidatus Cloacamonas acidaminovoransputative Site-specific DNA-methyltransferase (cytosine-N(4)-specific)5e-0961.2
NC_014033:1152994:1164840116484011660841245Prevotella ruminicola 23 chromosome, complete genomeDNA (cytosine-5-)-methyltransferase8e-0960.8
NC_011365:1171536:120245612024561203127672Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein7e-0960.8
NC_009378:106193:130882130882131559678Yersinia pestis Pestoides F plasmid MT, complete sequenceputative methylase2e-0859.7
NC_003134:64672:646726467265349678Yersinia pestis CO92 plasmid pMT1, complete sequenceputative DNA methylase2e-0859.7
NC_008118:56777:947909479095467678Yersinia pestis Nepal516 plasmid pMT, complete sequenceDNA methylase2e-0859.7
NC_004838:51013:666486664867325678Yersinia pestis KIM plasmid pMT-1, complete sequencehypothetical protein2e-0859.7
NC_005815:61148:893978939790074678Yersinia pestis biovar Microtus str. 91001 plasmid pMT1, completeputative methylase2e-0859.7
NC_013929:3299736:3347147334714733489251779Streptomyces scabiei 87.22 chromosome, complete genomerestriction-modification system methyltransferase2e-0859.7
NC_010158:92819:108442108442109119678Yersinia pestis Angola plasmid pMT-pPCP, complete sequenceDNA methylase2e-0859.3
NC_009718:579291:580462580462581316855Fervidobacterium nodosum Rt17-B1, complete genomeDNA methylase N-4/N-6 domain-containing protein4e-0858.5
NC_014933:2240000:2256052225605222578061755Bacteroides helcogenes P 36-108 chromosome, complete genomeDNA methylase N-4/N-6 domain protein4e-0858.5
NC_017045:1:132401324014139900Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,DNA methylase n-4/n-6 domain protein5e-0858.2
NC_012587:1203103:1213202121320212149081707Rhizobium sp. NGR234, complete genomemodification methylase EcaI6e-0857.8
NC_007414:56508:619386193862621684Escherichia coli O157:H7 EDL933 plasmid pO157, complete sequencehypothetical protein9e-0857.4
NC_002128:35000:393633936340046684Escherichia coli O157:H7 str. Sakai plasmid pO157, completehemagglutinin-associated protein9e-0857.4
NC_016906:3006748:3013820301382030152681449Gordonia polyisoprenivorans VH2 chromosome, complete genomemethylase HpaI2e-0756.2
NC_012778:1819559:183252918325291833332804Eubacterium eligens ATCC 27750, complete genomesite-specific DNA-methyltransferase (adenine-specific)2e-0756.2
NC_016616:2997348:3006565300656530077311167Dechlorosoma suillum PS chromosome, complete genomeadenine specific DNA methylase Mod3e-0755.8
NC_010067:4149298:416498041649804165864885Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-0755.8
NC_015666:3606053:3624377362437736261161740Halopiger xanaduensis SH-6 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein3e-0755.5
NC_014246:1457992:1469749146974914709661218Mobiluncus curtisii ATCC 43063 chromosome, complete genomeputative site-specific DNA-methyltransferase4e-0755.1
NC_009787:17344:180141801418697684Escherichia coli E24377A plasmid pETEC_35, complete sequenceDNA methylase family protein4e-0755.1
NC_017319:155958:163189163189163872684Shigella flexneri 2002017 plasmid pSFxv_1, complete sequencehypothetical protein5e-0755.1
NC_004851:157675:164527164527165210684Shigella flexneri 2a str. 301 plasmid pCP301, complete sequencehypothetical protein5e-0755.1
NC_012471:781063:795598795598796308711Streptococcus equi subsp. equi 4047, complete genomeDNA methylase6e-0754.7
NC_018604:758819:762103762103763008906Brachyspira pilosicoli WesB complete genomeDNA methylase N-4/N-6 domain-containing protein8e-0754.3
NC_010831:40000:4454244542458671326Chlorobium phaeobacteroides BS1, complete genomeDNA methylase N-4/N-6 domain protein7e-0754.3
NC_014217:4550544:4555744455574445571861443Starkeya novella DSM 506 chromosome, complete genomeDNA methylase N-4/N-6 domain protein7e-0754.3
NC_006856:95830:960529605296735684Salmonella enterica subsp. enterica serovar Choleraesuis strputative site-specific DNA methyl transferase8e-0753.9
NC_016025:596670:6064136064136074531041Candidatus Chloracidobacterium thermophilum B chromosome chromosomeDNA modification methylase9e-0753.9
NC_020126:7255111:727680772768077277688882Myxococcus stipitatus DSM 14675, complete genomeadenine-specific DNA methyltransferase1e-0653.5
NC_009617:1897887:1913872191387219151041233Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein1e-0653.5
NC_010546:4590994:460997546099754610862888Cyanothece sp. ATCC 51142 chromosome circular, complete sequenceputative DNA methylase N-4/N-62e-0652.8
NC_013665:2176502:219282221928222193739918Methanocella paludicola SANAE, complete genomeputative DNA methylase2e-0652.8
NC_003305:922357:9342649342649356671404Agrobacterium tumefaciens str. C58 chromosome linear, completeDNA methyltransferase2e-0652.8
NC_010162:2469915:2481320248132024831551836Sorangium cellulosum 'So ce 56', complete genomehypothetical protein3e-0652.4
NC_010424:697187:7415747415747432111638Candidatus Desulforudis audaxviator MP104C, complete genomeDNA methylase N-4/N-6 domain protein3e-0652.4
NC_003063:1128370:1139089113908911404741386Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein3e-0652.4
NC_008212:1295061:1300720130072013022701551Haloquadratum walsbyi DSM 16790, complete genomesite-specific DNA-methyltransferase3e-0652
NC_016812:152831:1621551621551638941740Sinorhizobium fredii HH103, complete genomemodification methylase EcaI4e-0652
NC_015562:1816000:183292918329291833705777Methanotorris igneus Kol 5 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein7e-0651.2
NC_016786:720000:7327607327607347632004Corynebacterium diphtheriae HC01 chromosome, complete genomeputative DNA restriction-modification system, DNA methylase9e-0650.8
NC_016782:720000:7327917327917347942004Corynebacterium diphtheriae 241 chromosome, complete genomeputative DNA restriction-modification system, DNA methylase9e-0650.8
NC_002935:781172:7837287837287857312004Corynebacterium diphtheriae NCTC 13129, complete genomePutative DNA methylase9e-0650.8
NC_016787:733685:7463557463557483582004Corynebacterium diphtheriae HC03 chromosome, complete genomeputative DNA restriction-modification system, DNA methylase9e-0650.8