Pre_GI: BLASTP Hits

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Query: NC_009565:479500:493953 Mycobacterium tuberculosis F11, complete genome

Start: 493953, End: 494963, Length: 1011

Host Lineage: Mycobacterium tuberculosis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain (genotype F11) represents the largest portion of isolates recovered from tuberculosis patients during a TB epidemic in the Western Cape of South Africa. Causative agent of tuberculosis. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. This bacterium is the causative agent of tuberculosis - a chronic infectious disease with a growing incidence worldwide. It infects 1.7 billion people a year (~33% of the entire world population) and causes over 3 million deaths/year. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. The sluggish growth rate is a result of the tough cell wall that resists the passage of nutrients into the cell and inhibits waste products to be excreted out of the cell. The specialized cell envelope of this organism resembles a modified Gram positive cell wall. It also contains complex fatty acids, such as mycolic acids, that cause the waxy appearance and impermeability of the envelope. These acids are found bound to the cell envelope, but also form cord factors when linked with a carbohydrate component to form a cord-like structure. Primary infection occurs by inhalation of the organism in droplets that are aerosolized by an infected person. The organism initially replicates in cells of the terminal airways, after which it is taken up by, and replicates in, alveolar macrophages. Macrophages distribute the organism to other areas of the lungs and the regional lymph nodes. Once a cell-mediated hypersensitivity immune response develops, replication of the organism decreases and the bacteria become restricted to developing granulomas.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016804:477500:4919324919324929421011Mycobacterium bovis BCG str. Mexico chromosome, complete genomeF420-dependent glucose-6-phosphate dehydrogenase0667
NC_000962:475816:4907834907834917931011Mycobacterium tuberculosis H37Rv, complete genomePROBABLE F420-DEPENDENT GLUCOSE-6-PHOSPHATE DEHYDROGENASE FGD10667
NC_012207:477500:4919314919314929411011Mycobacterium bovis BCG str. Tokyo 172, complete genomeputative F420-dependent glucose-6-phosphate dehydrogenase0667
NC_008769:507000:5215985215985226081011Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomeputative f420-dependent glucose-6-phosphate dehydrogenase fgd10667
NC_002755:472872:4922324922324932421011Mycobacterium tuberculosis CDC1551, complete genomeglucose-6-phosphate dehydrogenase, F420-dependent0667
NC_009525:477093:4920934920934931031011Mycobacterium tuberculosis H37Ra, complete genomeputative f420-dependent glucose-6-phosphate dehydrogenase Fgd10667
NC_002945:476835:4918024918024928121011Mycobacterium bovis AF2122/97, complete genomeF420-dependent glucose-6-phosphate dehydrogenase0667
NC_012943:476500:4910424910424920521011Mycobacterium tuberculosis KZN 1435 chromosome, complete genomeF420-dependent glucose-6-phosphate dehydrogenase0667
NC_016768:476500:4910424910424920521011Mycobacterium tuberculosis KZN 4207 chromosome, complete genomeF420-dependent glucose-6-phosphate dehydrogenase fgd10667
NC_015848:483500:5011525011525021621011Mycobacterium canettii CIPT 140010059, complete genomeputative F420-dependent glucose-6-phosphate dehydrogenase FGD10665
NC_019950:481881:4971714971714981811011Mycobacterium canettii CIPT 140060008 complete genomeF420-dependent glucose-6-phosphate dehydrogenase Fgd10662
NC_010612:835648:8529698529698539791011Mycobacterium marinum M, complete genomeF420-dependent glucose-6-phosphate dehydrogenase Fgd12e-175614
NC_011896:332939:3530233530233540331011Mycobacterium leprae Br4923, complete genomeputative F420-dependent glucose-6-phosphate dehydrogenase2e-173608
NC_002677:332923:3530073530073540171011Mycobacterium leprae TN, complete genomeputative F420-dependent glucose-6-phosphate dehydrogenase2e-173608
NC_016604:1285277:1306137130613713071471011Mycobacterium rhodesiae NBB3 chromosome, complete genomeglucose-6-phosphate dehydrogenase (coenzyme-F420)2e-168592
NC_012522:2031786:2033292203329220342991008Rhodococcus opacus B4, complete genomeF420-dependent glucose-6-phosphate dehydrogenase6e-163573
NC_008271:35909:5945859458604651008Rhodococcus sp. RHA1 plasmid pRHL3, complete sequencepossible F420-dependent glucose-6-phosphate dehydrogenase2e-160565
NC_008268:2313583:2314567231456723155741008Rhodococcus sp. RHA1, complete genomeprobable 5,10-methylenetetrahydromethanopterin reductase3e-160564
NC_008271:140846:1615081615081625211014Rhodococcus sp. RHA1 plasmid pRHL3, complete sequenceprobable glucose-6-phosphate 1-dehydrogenase2e-159561
NC_007355:499764:5060865060865071141029Methanosarcina barkeri str. fusaro chromosome 1, complete sequenceF420-dependent glucose-6-phosphate dehydrogenase1e-47190
NC_012522:7837071:784454878445487844892345Rhodococcus opacus B4, complete genomehypothetical protein2e-46186
NC_015574:2322811:233672223367222337678957Methanobacterium sp. SWAN-1 chromosome, complete genomeF420-dependent oxidoreductase, G6PDH family1e-40167
NC_014625:1903277:191122719112271912180954Ketogulonicigenium vulgare Y25 chromosome, complete genomedehydrogenase protein2e-36153
NC_019792:3219333:322031532203153221280966Natronobacterium gregoryi SP2 chromosome, complete genomenon-F420 flavinoid oxidoreductase2e-36152
NC_014659:2769486:278434827843482785298951Rhodococcus equi 103S, complete genomeFMN-dependent monooxygenase8e-35147
NC_014815:2363460:238765523876552388620966Micromonospora sp. L5 chromosome, complete genomef420-dependent oxidoreductase, g6pdh family2e-33143
NC_014158:233733:288586288586289368783Tsukamurella paurometabola DSM 20162 chromosome, complete genomeF420-dependent oxidoreductase, G6PDH family3e-31135
NC_015588:475723:4989794989795000041026Isoptericola variabilis 225 chromosome, complete genomeF420-dependent oxidoreductase, G6PDH family4e-29129
NC_015562:1299648:130121013012101302205996Methanotorris igneus Kol 5 chromosome, complete genome5,10-methylenetetrahydromethanopterin reductase4e-24112
NC_014122:143446:148423148423149418996Methanocaldococcus infernus ME chromosome, complete genome5,10-methylenetetrahydromethanopterin reductase7e-22104
NC_013407:146000:162714162714163709996Methanocaldococcus vulcanius M7, complete genome5,10-methylenetetrahydromethanopterin reductase2e-20100
NC_014830:3438504:3463866346386634650021137Intrasporangium calvum DSM 43043 chromosome, complete genomeLuciferase-like, subgroup3e-1996.3
NC_013849:627811:645634645634646632999Ferroglobus placidus DSM 10642 chromosome, complete genome5,10-methylenetetrahydromethanopterin reductase4e-1995.9
NC_013849:19404:4081540815418311017Ferroglobus placidus DSM 10642 chromosome, complete genomeLuciferase-like, subgroup4e-1995.5
NC_003551:478065:4872644872644883131050Methanopyrus kandleri AV19, complete genomemethylenetetrahydromethanopterin reductase3e-1789.4
NC_014253:2113233:213386221338622134848987Methanohalobium evestigatum Z-7303 chromosome, complete genome5,10-methylenetetrahydromethanopterin reductase3e-1479.7
NC_015957:5082172:5086986508698650880471062Streptomyces violaceusniger Tu 4113 chromosome, complete genomeputative F420-dependent oxidoreductase2e-1273.2
NC_013174:650986:664735664735665733999Jonesia denitrificans DSM 20603, complete genomeLuciferase-like monooxygenase1e-1170.9
NC_009921:3419978:343679634367963437671876Frankia sp. EAN1pec, complete genomeluciferase family protein2e-1170.1
NC_018750:6717315:6722665672266567236781014Streptomyces venezuelae ATCC 10712, complete genomeF420-dependent N(5),N(10)-methylenetetrahydromethanopterin reductase1e-1067.8
NC_002677:173170:1754411754411765891149Mycobacterium leprae TN, complete genomeputative oxidoreductase2e-1067
NC_011896:173197:1754681754681766161149Mycobacterium leprae Br4923, complete genomeputative oxidoreductase2e-1067
NC_009380:4702815:472372647237264724616891Salinispora tropica CNB-440 chromosome, complete genomehypothetical protein2e-1067
NC_019950:3306419:3324033332403333251781146Mycobacterium canettii CIPT 140060008 complete genomePutative oxidoreductase3e-1066.6
NC_015848:3343731:3359724335972433608691146Mycobacterium canettii CIPT 140010059, complete genomeputative oxidoreductase3e-1066.6
NC_014165:2888961:2906558290655829081891632Thermobispora bispora DSM 43833 chromosome, complete genomeluciferase-like monooxygenase2e-1066.6
NC_013523:2560000:2577966257796625790451080Sphaerobacter thermophilus DSM 20745 chromosome 1, complete genomeLuciferase-like monooxygenase2e-1066.6
NC_009953:3426344:342932634293263430213888Salinispora arenicola CNS-205 chromosome, complete genomehypothetical protein4e-1065.9
NC_009565:3299937:3314576331457633157211146Mycobacterium tuberculosis F11, complete genomehypothetical oxidoreductase4e-1065.9
NC_009525:3300456:3315095331509533162401146Mycobacterium tuberculosis H37Ra, complete genomeN5,N10-methylenetetrahydromethanopterin reductase-related protein4e-1065.9
NC_008769:3242453:3257264325726432584091146Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomeputative oxidoreductase4e-1065.9
NC_012207:3237440:3250091325009132512361146Mycobacterium bovis BCG str. Tokyo 172, complete genomeputative oxidoreductase4e-1065.9
NC_002945:3246278:3259791325979132609361146Mycobacterium bovis AF2122/97, complete genomeoxidoreductase4e-1065.9
NC_000962:3288464:3303103330310333042481146Mycobacterium tuberculosis H37Rv, complete genomePOSSIBLE OXIDOREDUCTASE4e-1065.9
NC_016804:3221818:3236629323662932377741146Mycobacterium bovis BCG str. Mexico chromosome, complete genomeputative oxidoreductase4e-1065.9
NC_017026:3282405:3297048329704832981931146Mycobacterium tuberculosis RGTB327 chromosome, complete genomeoxidoreductase4e-1065.9
NC_002755:3282785:3297424329742432985691146Mycobacterium tuberculosis CDC1551, complete genomeN5,N10-methylenetetrahydromethanopterin reductase-related protein8e-1064.7
NC_008278:925231:939757939757940668912Frankia alni ACN14a, complete genomehypothetical protein9e-1064.7
NC_015574:1970967:198397119839711984936966Methanobacterium sp. SWAN-1 chromosome, complete genome5,10-methylenetetrahydromethanopterin reductase5e-0962.4
NC_006361:3132000:313741631374163138288873Nocardia farcinica IFM 10152, complete genomehypothetical protein4e-0962.4
NC_013526:955848:977624977624978514891Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeLuciferase-like monooxygenase1e-0861.2
NC_013510:3117837:3148924314892431499521029Thermomonospora curvata DSM 43183, complete genomeLuciferase-like monooxygenase2e-0860.5
NC_013530:423540:4431224431224453832262Xylanimonas cellulosilytica DSM 15894, complete genomeFAD linked oxidase domain protein3e-0859.7
NC_013093:7222000:723693572369357237816882Actinosynnema mirum DSM 43827, complete genomeLuciferase-like monooxygenase4e-0859.3
NC_014507:2196539:219954921995492200547999Methanoplanus petrolearius DSM 11571 chromosome, complete genome5,10-methylenetetrahydromethanopterin reductase4e-0859.3
NC_013131:5226919:523047052304705231336867Catenulispora acidiphila DSM 44928, complete genomeLuciferase-like monooxygenase4e-0859.3
NC_013093:125363:128739128739129671933Actinosynnema mirum DSM 43827, complete genomeLuciferase-like monooxygenase5e-0858.9
NC_016582:6509792:652535565253556526248894Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein6e-0858.5
NC_008595:2252830:225646422564642257324861Mycobacterium avium 104, complete genomehypothetical protein6e-0858.5
NC_012522:7837071:784362278436227844551930Rhodococcus opacus B4, complete genomeputative oxidoreductase8e-0858.2
NC_019673:9084045:9098660909866090998021143Saccharothrix espanaensis DSM 44229 complete genomeAlkanesulfonate monooxygenase1e-0757.8
NC_008596:2873675:287367528736752874541867Mycobacterium smegmatis str. MC2 155, complete genomehydride transferase 11e-0757.8
NC_014318:7480669:750026475002647501154891Amycolatopsis mediterranei U32 chromosome, complete genomeputative flavin-dependent oxidoreductase2e-0757.4
NC_017186:7480714:750030975003097501199891Amycolatopsis mediterranei S699 chromosome, complete genomeflavin-dependent oxidoreductase2e-0757.4
NC_016947:2380500:2395352239535223963951044Mycobacterium intracellulare MOTT-02 chromosome, complete genomeluciferase family protein2e-0757.4
NC_009077:3376351:3379026337902633800481023Mycobacterium sp. JLS, complete genomeluciferase family protein1e-0757.4
NC_008705:3430839:3433514343351434345361023Mycobacterium sp. KMS, complete genomeluciferase family protein1e-0757.4
NC_008146:3401743:3405232340523234062541023Mycobacterium sp. MCS, complete genomeluciferase-like protein1e-0757.4
NC_016906:1458158:147728314772831478281999Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative F420-dependent oxidoreductase2e-0757
NC_013093:2633000:265936326593632660220858Actinosynnema mirum DSM 43827, complete genomeLuciferase-like monooxygenase2e-0757
NC_016109:4485925:449765444976544498541888Kitasatospora setae KM-6054, complete genomehypothetical protein2e-0757
NC_014814:1425500:1426123142612314271721050Mycobacterium sp. Spyr1 chromosome, complete genomeflavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase2e-0757
NC_009338:4869700:4876172487617248772211050Mycobacterium gilvum PYR-GCK chromosome, complete genomeluciferase family protein2e-0756.6
NC_008595:2546696:257861725786172579612996Mycobacterium avium 104, complete genome5,10-methylenetetrahydromethanopterin reductase4e-0756.2
NC_019962:3331849:333184933318493332721873Natrinema pellirubrum DSM 15624, complete genomeputative F420-dependent oxidoreductase, Rv2161c family4e-0755.8
NC_009077:4810379:4812151481215148132001050Mycobacterium sp. JLS, complete genomeluciferase family protein8e-0755.1
NC_012589:633500:6482936482936493211029Sulfolobus islandicus L.S.2.15, complete genomeLuciferase-like monooxygenase1e-0654.7
NC_003888:5443832:545801954580195458891873Streptomyces coelicolor A3(2), complete genomeoxidoreductase8e-0754.7
NC_003155:921494:929152929152930075924Streptomyces avermitilis MA-4680, complete genomemonooxygenase2e-0653.9
NC_019962:492000:512613512613513536924Natrinema pellirubrum DSM 15624, complete genomeluciferase-type oxidoreductase, BA3436 family2e-0653.9
NC_012669:96966:116343116343117266924Beutenbergia cavernae DSM 12333, complete genomeLuciferase-like monooxygenase2e-0653.9
NC_010296:2695186:2710629271062927117261098Microcystis aeruginosa NIES-843, complete genomealkanesulfonate monooxygenase2e-0653.5
NC_010725:5217260:5233190523319052342871098Methylobacterium populi BJ001, complete genomeAlkanesulfonate monooxygenase2e-0653.5
NC_016948:3104403:311090131109013111896996Mycobacterium intracellulare MOTT-64 chromosome, complete genome5,10-methylenetetrahydromethanopterin reductase4e-0652.8
NC_021177:7815791:783722278372227838139918Streptomyces fulvissimus DSM 40593, complete genomeHydride transferase 14e-0652.8
NC_013172:3093467:3110773311077331118281056Brachybacterium faecium DSM 4810, complete genomeflavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase5e-0652.4
NC_008268:7052202:705220270522027053074873Rhodococcus sp. RHA1, complete genomepossible hydride transferase6e-0652
NC_013131:8480384:852485585248558525784930Catenulispora acidiphila DSM 44928, complete genomeLuciferase-like monooxygenase6e-0652
NC_014815:841484:856510856510857466957Micromonospora sp. L5 chromosome, complete genomef420-dependent oxidoreductase7e-0652
NC_008595:1869284:1881648188164818828501203Mycobacterium avium 104, complete genomehypothetical protein9e-0651.2