Pre_GI: BLASTP Hits

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Query: NC_009565:2306574:2329786 Mycobacterium tuberculosis F11, complete genome

Start: 2329786, End: 2331321, Length: 1536

Host Lineage: Mycobacterium tuberculosis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain (genotype F11) represents the largest portion of isolates recovered from tuberculosis patients during a TB epidemic in the Western Cape of South Africa. Causative agent of tuberculosis. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. This bacterium is the causative agent of tuberculosis - a chronic infectious disease with a growing incidence worldwide. It infects 1.7 billion people a year (~33% of the entire world population) and causes over 3 million deaths/year. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. The sluggish growth rate is a result of the tough cell wall that resists the passage of nutrients into the cell and inhibits waste products to be excreted out of the cell. The specialized cell envelope of this organism resembles a modified Gram positive cell wall. It also contains complex fatty acids, such as mycolic acids, that cause the waxy appearance and impermeability of the envelope. These acids are found bound to the cell envelope, but also form cord factors when linked with a carbohydrate component to form a cord-like structure. Primary infection occurs by inhalation of the organism in droplets that are aerosolized by an infected person. The organism initially replicates in cells of the terminal airways, after which it is taken up by, and replicates in, alveolar macrophages. Macrophages distribute the organism to other areas of the lungs and the regional lymph nodes. Once a cell-mediated hypersensitivity immune response develops, replication of the organism decreases and the bacteria become restricted to developing granulomas.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015759:667505:683013683013683930918Weissella koreensis KACC 15510 chromosome, complete genomeputative zinc/iron ABC transporter, substrate-binding lipoprotein precursor1e-30135
NC_015428:193817:208588208588209490903Lactobacillus buchneri NRRL B-30929 chromosome, complete genomeABC-type metal ion transporter, periplasmic subunit2e-25117
NC_007164:380000:397588397588398532945Corynebacterium jeikeium K411, complete genomeputative ABC transport system, solute-binding protein2e-1894.7
NC_014106:1658103:166546316654631666350888Lactobacillus crispatus ST1, complete genomeABC-type metal ion transport system, substrate binding-protein/surface adhesin8e-1892.4
NC_014724:1731238:173952117395211740408888Lactobacillus amylovorus GRL 1112 chromosome, complete genomeABC-type metal ion transport system, substrate binding-protein/surface adhesin2e-1791.3
NC_015214:1700000:170828917082891709176888Lactobacillus acidophilus 30SC chromosome, complete genomeABC-type metal ion transport system, substrate binding-protein/surface adhesin2e-1791.3
NC_015214:1853106:187212718721271873017891Lactobacillus acidophilus 30SC chromosome, complete genomeABC-type metal ion transport system, substrate binding-protein/surface adhesin3e-1790.5
NC_005362:1796696:179818317981831799082900Lactobacillus johnsonii NCC 533, complete genomeABC transporter solute-binding component4e-1789.7
NC_015602:117939:147537147537148445909Lactobacillus kefiranofaciens ZW3 chromosome, complete genomehypothetical protein3e-1687
NC_013714:2086526:2146343214634321480221680Bifidobacterium dentium Bd1, complete genomesolute binding protein of ABC transporter system, YodA-like protein5e-1686.3
NC_010080:1685280:169294216929421693832891Lactobacillus helveticus DPC 4571, complete genomehypothetical protein3e-1583.6
NC_014246:1730000:1742221174222117432881068Mobiluncus curtisii ATCC 43063 chromosome, complete genomeABC transporter ATP-binding protein6e-1479.3
NC_019907:845663:872421872421873332912Liberibacter crescens BT-1 chromosome, complete genomeZinc ABC transporter substrate-binding protein ZnuA4e-1066.6
NC_008262:2348328:235520223552022356098897Clostridium perfringens SM101, complete genomeABC transporter, substrate-binding protein9e-0858.9
NC_009009:1340518:135552413555241356462939Streptococcus sanguinis SK36, complete genomeZn/Mn ABC-type porter lipoprotein, putative5e-0756.2
NC_005070:2374850:238394023839402384848909Synechococcus sp. WH 8102, complete genomeputative zinc transport system substrate-binding protein9e-0755.5