Pre_GI: BLASTP Hits

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Query: NC_009565:2306574:2327737 Mycobacterium tuberculosis F11, complete genome

Start: 2327737, End: 2328450, Length: 714

Host Lineage: Mycobacterium tuberculosis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain (genotype F11) represents the largest portion of isolates recovered from tuberculosis patients during a TB epidemic in the Western Cape of South Africa. Causative agent of tuberculosis. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. This bacterium is the causative agent of tuberculosis - a chronic infectious disease with a growing incidence worldwide. It infects 1.7 billion people a year (~33% of the entire world population) and causes over 3 million deaths/year. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. The sluggish growth rate is a result of the tough cell wall that resists the passage of nutrients into the cell and inhibits waste products to be excreted out of the cell. The specialized cell envelope of this organism resembles a modified Gram positive cell wall. It also contains complex fatty acids, such as mycolic acids, that cause the waxy appearance and impermeability of the envelope. These acids are found bound to the cell envelope, but also form cord factors when linked with a carbohydrate component to form a cord-like structure. Primary infection occurs by inhalation of the organism in droplets that are aerosolized by an infected person. The organism initially replicates in cells of the terminal airways, after which it is taken up by, and replicates in, alveolar macrophages. Macrophages distribute the organism to other areas of the lungs and the regional lymph nodes. Once a cell-mediated hypersensitivity immune response develops, replication of the organism decreases and the bacteria become restricted to developing granulomas.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017026:2286000:230644623064462307159714Mycobacterium tuberculosis RGTB327 chromosome, complete genomehypothetical protein6e-117419
NC_016804:2254979:227614222761422276855714Mycobacterium bovis BCG str. Mexico chromosome, complete genomehypothetical protein6e-117419
NC_014666:7222000:722200972220097222713705Frankia sp. EuI1c chromosome, complete genomecarboxymethylenebutenolidase4e-39161
NC_004347:1038253:104078910407891041751963Shewanella oneidensis MR-1, complete genomedienelactone hydrolase family protein1e-1273.6
NC_008321:977500:981944981944982906963Shewanella sp. MR-4, complete genomeTwin-arginine translocation pathway signal2e-1273.2
NC_008322:3758500:376997637699763770938963Shewanella sp. MR-7, complete genomeTwin-arginine translocation pathway signal5e-1271.6
NC_011663:1159070:115907011590701160050981Shewanella baltica OS223 chromosome, complete genomedienelactone hydrolase2e-1169.7
NC_010170:3944228:394422839442283944929702Bordetella petrii, complete genomecarboxymethylenebutenolidase2e-1169.3
NC_015137:1207769:1207769120776912089921224Burkholderia sp. CCGE1001 chromosome 2, complete sequencecarboxymethylenebutenolidase6e-1167.8
NC_009254:23000:402174021740924708Burkholderia vietnamiensis G4 chromosome 3, complete sequencecarboxymethylenebutenolidase1e-1066.6
NC_013510:517878:536494536494537198705Thermomonospora curvata DSM 43183, complete genomeCarboxymethylenebutenolidase8e-1063.9
NC_008392:542000:542210542210542923714Burkholderia cepacia AMMD chromosome 3, complete sequenceCarboxymethylenebutenolidase1e-0963.5
NC_011740:2986514:300866730086673009593927Escherichia fergusonii ATCC 35469, complete genomeputative enzyme1e-0963.2
NC_013421:4714478:477210447721044772931828Pectobacterium wasabiae WPP163, complete genomeCarboxymethylenebutenolidase2e-0962.8
NC_011740:3739395:374411937441193744997879Escherichia fergusonii ATCC 35469, complete genomeputative hydrolase4e-0961.6
NC_012721:2556160:2557534255753425587811248Burkholderia glumae BGR1 chromosome 2, complete genomeCarboxymethylenebutenolidase1e-0860.1
NC_012912:4428111:445124244512424452069828Dickeya zeae Ech1591, complete genomeCarboxymethylenebutenolidase2e-0859.7
NC_010170:1580832:158480915848091585519711Bordetella petrii, complete genomeprobable carboxymethylenebutenolidase2e-0859.3
NC_007951:3631772:365320736532073653917711Burkholderia xenovorans LB400 chromosome 1, complete sequenceDienelactone hydrolase2e-0859.3
NC_016745:2229271:223625422362542237051798Oceanimonas sp. GK1 chromosome, complete genomedienelactone hydrolase6e-0857.8
NC_008786:1332041:135508913550891355778690Verminephrobacter eiseniae EF01-2, complete genomeCarboxymethylenebutenolidase8e-0857.4
NC_014641:20103:211582115821874717Achromobacter xylosoxidans A8 plasmid pA81, complete sequencecarboxymethylenebutenolidase 53e-0755.5
NC_010170:3944228:396057939605793961295717Bordetella petrii, complete genomeprobable carboxymethylenebutenolidase3e-0755.5
NC_003106:2496232:251705225170522517837786Sulfolobus tokodaii str. 7, complete genomehypothetical protein5e-0754.7
NC_014722:1971305:197467319746731975539867Burkholderia rhizoxinica HKI 454, complete genomeCarboxymethylenebutenolidase1e-0653.5
NC_007337:10464:208902089021594705Ralstonia eutropha JMP134 plasmid 1, complete sequenceCarboxymethylenebutenolidase1e-0653.5