Pre_GI: BLASTP Hits

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Query: NC_009565:1629780:1654163 Mycobacterium tuberculosis F11, complete genome

Start: 1654163, End: 1655356, Length: 1194

Host Lineage: Mycobacterium tuberculosis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain (genotype F11) represents the largest portion of isolates recovered from tuberculosis patients during a TB epidemic in the Western Cape of South Africa. Causative agent of tuberculosis. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. This bacterium is the causative agent of tuberculosis - a chronic infectious disease with a growing incidence worldwide. It infects 1.7 billion people a year (~33% of the entire world population) and causes over 3 million deaths/year. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. The sluggish growth rate is a result of the tough cell wall that resists the passage of nutrients into the cell and inhibits waste products to be excreted out of the cell. The specialized cell envelope of this organism resembles a modified Gram positive cell wall. It also contains complex fatty acids, such as mycolic acids, that cause the waxy appearance and impermeability of the envelope. These acids are found bound to the cell envelope, but also form cord factors when linked with a carbohydrate component to form a cord-like structure. Primary infection occurs by inhalation of the organism in droplets that are aerosolized by an infected person. The organism initially replicates in cells of the terminal airways, after which it is taken up by, and replicates in, alveolar macrophages. Macrophages distribute the organism to other areas of the lungs and the regional lymph nodes. Once a cell-mediated hypersensitivity immune response develops, replication of the organism decreases and the bacteria become restricted to developing granulomas.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002945:1621765:1646272164627216474651194Mycobacterium bovis AF2122/97, complete genomehypothetical protein0794
NC_012522:7596039:7630944763094476321731230Rhodococcus opacus B4, complete genomeputative iron-sulfur cluster assembly protein SufD9e-153540
NC_016788:1214026:1274841127484112760161176Corynebacterium diphtheriae HC04 chromosome, complete genomeFe-S cluster assembly ABC transporter permease1e-123443
NC_016783:1274000:1299729129972913009041176Corynebacterium diphtheriae INCA 402 chromosome, complete genomeABC transporter involved in Fe-S cluster assembly permease protein1e-123443
NC_016801:1255611:1320563132056313217381176Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeFe-S cluster assembly ABC transporter permease2e-123442
NC_016785:1233384:1257019125701912581941176Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeFe-S cluster assembly ABC transporter permease5e-123441
NC_002935:1237585:1301742130174213029171176Corynebacterium diphtheriae NCTC 13129, complete genomehypothetical protein5e-123441
NC_016802:1256287:1276333127633312775081176Corynebacterium diphtheriae HC02 chromosome, complete genomeFe-S cluster assembly ABC transporter permease5e-123441
NC_016789:1295918:1319548131954813207231176Corynebacterium diphtheriae PW8 chromosome, complete genomeFe-S cluster assembly ABC transporter permease5e-123441
NC_016787:1240000:1264851126485112660261176Corynebacterium diphtheriae HC03 chromosome, complete genomeFe-S cluster assembly ABC transporter permease5e-123441
NC_016790:1218596:1242230124223012434051176Corynebacterium diphtheriae VA01 chromosome, complete genomeFe-S cluster assembly ABC transporter permease5e-123441
NC_016799:1268706:1330886133088613320611176Corynebacterium diphtheriae 31A chromosome, complete genomeFe-S cluster assembly ABC transporter permease5e-123441
NC_016800:1243000:1303999130399913051741176Corynebacterium diphtheriae BH8 chromosome, complete genomeFe-S cluster assembly ABC transporter permease5e-123441
NC_016782:1251796:1275432127543212766071176Corynebacterium diphtheriae 241 chromosome, complete genomeABC transporter involved in Fe-S cluster assembly permease protein3e-123441
NC_016786:1251765:1275401127540112765761176Corynebacterium diphtheriae HC01 chromosome, complete genomeFe-S cluster assembly ABC transporter permease3e-123441
NC_016932:1157587:1172630117263011738111182Corynebacterium pseudotuberculosis 316 chromosome, complete genomeFeS cluster assembly protein SufD2e-121436
NC_014329:1169674:1187872118787211890531182Corynebacterium pseudotuberculosis FRC41 chromosome, completeFe-S cluster assembly ABC transporter permease5e-121434
NC_016781:1169632:1187830118783011890111182Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeFeS cluster assembly protein SufD5e-121434
NC_017031:1172644:1187687118768711888681182Corynebacterium pseudotuberculosis P54B96 chromosome, completeFeS cluster assembly protein SufD5e-121434
NC_017301:1172660:1187698118769811888791182Corynebacterium pseudotuberculosis C231 chromosome, completeFeS cluster assembly protein SufD5e-121434
NC_017303:1172656:1187701118770111888821182Corynebacterium pseudotuberculosis I19 chromosome, complete genomeFeS cluster assembly protein SufD5e-121434
NC_014643:2056280:2112264211226421135381275Rothia dentocariosa ATCC 17931 chromosome, complete genomeFeS assembly protein SufD6e-103374
NC_015387:1898496:1902440190244019037711332Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeFeS assembly protein SufD6e-33142
NC_009937:4122652:4141783414178341431201338Azorhizobium caulinodans ORS 571, complete genomeFeS assembly protein2e-28127
NC_013851:859396:8636398636398649401302Allochromatium vinosum DSM 180 chromosome, complete genomeFeS assembly protein SufD2e-26120
NC_008260:2142311:2143063214306321442921230Alcanivorax borkumensis SK2, complete genomepermease component of ABC-tranporter3e-23109
NC_015731:2148517:2174434217443421757441311Nitrosomonas sp. Is79A3 chromosome, complete genomeFeS assembly protein SufD2e-22107
NC_004663:4373902:4389224438922443905671344Bacteroides thetaiotaomicron VPI-5482, complete genomeconserved hypothetical protein, putative ABC transporter permease component2e-22106
NC_011884:3393500:3395615339561533969701356Cyanothece sp. PCC 7425, complete genomeFeS assembly protein SufD7e-22105
NC_016077:388941:3995353995354009681434Acidaminococcus intestini RyC-MR95 chromosome, complete genomeiron-regulated ABC transporter membrane5e-1995.9
NC_009925:1184442:1201925120192512032291305Acaryochloris marina MBIC11017, complete genomeFeS assembly protein SufD6e-1995.5
NC_008343:1470360:1474226147422614755511326Granulibacter bethesdensis CGDNIH1, complete genomesufD protein9e-1994.7
NC_015389:1298689:1324041132404113254531413Coriobacterium glomerans PW2 chromosome, complete genomeIron-regulated ABC transporter membrane component SufB1e-1687.8
NC_009952:1680682:1691270169127016925531284Dinoroseobacter shibae DFL 12, complete genomesufD2e-1687
NC_020995:477765:4777654777654791051341Enterococcus casseliflavus EC20, complete genomeFeS assembly protein SufD2e-1687
NC_013192:519600:5255965255965270171422Leptotrichia buccalis DSM 1135, complete genomeFeS assembly protein SufB2e-1687
NC_009486:1403175:1404292140429214056861395Thermotoga petrophila RKU-1 chromosome, complete genomeFeS assembly protein SufB3e-1686.7
NC_010483:1467616:1468733146873314701271395Thermotoga sp. RQ2, complete genomeFeS assembly protein SufB4e-1686.3
NC_016605:233087:2397302397302409591230Pediococcus claussenii ATCC BAA-344 chromosome, complete genomeFeS assembly protein SufD4e-1685.9
NC_013642:1425795:1428544142854414299381395Thermotoga naphthophila RKU-10, complete genomeFeS assembly protein SufB5e-1685.9
NC_013158:363222:3698033698033710141212Halorhabdus utahensis DSM 12940, complete genomeSufBD protein1e-1584.7
NC_015391:448833:4546094546094558951287Carnobacterium sp. 17-4 chromosome, complete genomeFeS assembly protein SufD2e-1584.3
NC_013928:797714:8031388031388045201383Streptococcus mutans NN2025, complete genomehypothetical protein1e-1584.3
NC_002945:1621765:1643735164373516462752541Mycobacterium bovis AF2122/97, complete genomehypothetical protein2e-1584
NC_009565:1629780:1651626165162616541662541Mycobacterium tuberculosis F11, complete genomehypothetical protein2e-1584
NC_006396:1626472:1626472162647216276831212Haloarcula marismortui ATCC 43049 chromosome I, complete sequencehypothetical protein2e-1583.6
NC_020388:2662947:2669755266975526711851431Natronomonas moolapensis 8.8.11 complete genomeSufB domain protein2e-1583.6
NC_014643:2056280:2110807211080721122641458Rothia dentocariosa ATCC 17931 chromosome, complete genomeFeS assembly protein SufB3e-1583.2
NC_013158:363222:3683793683793698061428Halorhabdus utahensis DSM 12940, complete genomeFeS assembly protein SufB3e-1583.2
NC_015387:1898496:1900975190097519023781404Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeFeS assembly protein SufB4e-1582.8
NC_014727:1736500:1751199175119917523621164Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,fe-s cluster assembly ABC transporter permease6e-1582.4
NC_013798:345339:3453393453393467571419Streptococcus gallolyticus UCN34, complete genomeputative FeS cluster formation protein SufB1e-1481.3
NC_015954:2764919:2782806278280627840201215Halophilic archaeon DL31 chromosome, complete genomeSufBD protein1e-1480.9
NC_006396:1626472:1627686162768616291161431Haloarcula marismortui ATCC 43049 chromosome I, complete sequencehypothetical protein2e-1480.5
NC_016781:1169632:1189017118901711904711455Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeFeS cluster assembly protein sufB2e-1480.5
NC_014329:1169674:1189059118905911905131455Corynebacterium pseudotuberculosis FRC41 chromosome, completeFe-S cluster assembly ABC transporter permease2e-1480.5
NC_016932:1157587:1173817117381711752711455Corynebacterium pseudotuberculosis 316 chromosome, complete genomeFeS cluster assembly protein sufB2e-1480.1
NC_014537:222114:2373212373212387421422Vulcanisaeta distributa DSM 14429 chromosome, complete genomeFeS assembly protein SufB6e-1479
NC_016787:1240000:1266029126602912674831455Corynebacterium diphtheriae HC03 chromosome, complete genomeFe-S cluster assembly ABC transporter permease8e-1478.6
NC_016790:1218596:1243408124340812448621455Corynebacterium diphtheriae VA01 chromosome, complete genomeFe-S cluster assembly ABC transporter permease8e-1478.6
NC_016799:1268706:1332064133206413335181455Corynebacterium diphtheriae 31A chromosome, complete genomeFe-S cluster assembly ABC transporter permease8e-1478.6
NC_016783:1274000:1300907130090713023611455Corynebacterium diphtheriae INCA 402 chromosome, complete genomeABC transporter involved in Fe-S cluster assembly permease protein8e-1478.6
NC_016788:1214026:1276019127601912774731455Corynebacterium diphtheriae HC04 chromosome, complete genomeFe-S cluster assembly ABC transporter permease8e-1478.6
NC_016789:1295918:1320726132072613221801455Corynebacterium diphtheriae PW8 chromosome, complete genomeFe-S cluster assembly ABC transporter permease8e-1478.6
NC_016801:1255611:1321741132174113231951455Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeFe-S cluster assembly ABC transporter permease8e-1478.6
NC_016782:1251796:1276610127661012780641455Corynebacterium diphtheriae 241 chromosome, complete genomeABC transporter involved in Fe-S cluster assembly permease protein8e-1478.6
NC_016786:1251765:1276579127657912780331455Corynebacterium diphtheriae HC01 chromosome, complete genomeFe-S cluster assembly ABC transporter permease8e-1478.6
NC_016800:1243000:1305177130517713066311455Corynebacterium diphtheriae BH8 chromosome, complete genomeFe-S cluster assembly ABC transporter permease8e-1478.6
NC_016802:1256287:1277511127751112789651455Corynebacterium diphtheriae HC02 chromosome, complete genomeFe-S cluster assembly ABC transporter permease8e-1478.6
NC_009785:1414892:1432473143247314338551383Streptococcus gordonii str. Challis substr. CH1, complete genomeFeS assembly protein SufB7e-1478.6
NC_017031:1172644:1188874118887411903281455Corynebacterium pseudotuberculosis P54B96 chromosome, completeFeS cluster assembly protein sufB7e-1478.6
NC_017301:1172660:1188885118888511903391455Corynebacterium pseudotuberculosis C231 chromosome, completeFeS cluster assembly protein sufB7e-1478.6
NC_017303:1172656:1188888118888811903421455Corynebacterium pseudotuberculosis I19 chromosome, complete genomeFeS cluster assembly protein sufB7e-1478.6
NC_002935:1237585:1302920130292013042991380Corynebacterium diphtheriae NCTC 13129, complete genomehypothetical protein9e-1478.2
NC_006834:1414113:1436500143650014377621263Xanthomonas oryzae pv. oryzae KACC10331, complete genomeABC transporter permease9e-1478.2
NC_010717:3933485:3934249393424939355111263Xanthomonas oryzae pv. oryzae PXO99A, complete genomeFeS assembly protein SufD9e-1478.2
NC_007705:1388607:1410846141084614121081263Xanthomonas oryzae pv. oryzae MAFF 311018, complete genomeABC transporter permease9e-1478.2
NC_016785:1233384:1258197125819712596511455Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeFe-S cluster assembly ABC transporter permease9e-1478.2
NC_014925:578759:5787595787595800661308Staphylococcus pseudintermedius HKU10-03 chromosome, completeIron-sulfur cluster assembly protein SufD1e-1377.8
NC_013922:2463299:2482169248216924835991431Natrialba magadii ATCC 43099 chromosome, complete genomeFeS assembly protein SufB1e-1377.8
NC_016632:830000:8400598400598413481290Serratia symbiotica str. 'Cinara cedri' chromosome, completeFeS assembly protein SufD2e-1377.4
NC_012522:7596039:7629484762948476309441461Rhodococcus opacus B4, complete genomeputative iron-sulfur cluster assembly protein SufB2e-1377
NC_015954:2764919:2781374278137427828041431Halophilic archaeon DL31 chromosome, complete genomeFeS assembly protein SufB3e-1376.6
NC_013192:519600:5270545270545281811128Leptotrichia buccalis DSM 1135, complete genomeSufBD protein4e-1376.3
NC_013922:2463299:2480941248094124821671227Natrialba magadii ATCC 43099 chromosome, complete genomeSufBD protein4e-1376.3
NC_011772:4875893:4886857488685748881491293Bacillus cereus G9842, complete genomeFeS assembly protein SufD1e-1274.7
NC_017190:3166000:3183699318369931850121314Bacillus amyloliquefaciens LL3 chromosome, complete genomeFe-S cluster assembly protein SufD1e-1274.3
NC_010184:4763932:4775110477511047764021293Bacillus weihenstephanensis KBAB4, complete genomeFeS assembly protein SufD1e-1274.3
NC_011969:4655602:4668001466800146692931293Bacillus cereus Q1 chromosome, complete genomeiron-regulated ABC transporter1e-1274.3
NC_013201:4500:1867218672200991428Halomicrobium mukohataei DSM 12286 plasmid pHmuk01, completeFeS assembly protein SufB2e-1273.6
NC_017341:903473:9216749216749229811308Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,ABC superfamily ATP binding cassette transporter, membrane protein6e-1272
NC_010184:4763932:4772023477202347734201398Bacillus weihenstephanensis KBAB4, complete genomeFeS assembly protein SufB3e-1169.7
NC_011772:4875893:4883770488377048851671398Bacillus cereus G9842, complete genomeFeS assembly protein SufB5e-1169.3
NC_014537:222114:2388092388092402421434Vulcanisaeta distributa DSM 14429 chromosome, complete genomeFeS assembly protein SufB1e-1068.2
NC_017190:3166000:3180629318062931820261398Bacillus amyloliquefaciens LL3 chromosome, complete genomeFeS cluster formation protein1e-1067.8
NC_015690:1109335:1111678111167811129851308Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein1e-1067.8
NC_016935:1636278:1639729163972916410361308Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein1e-1067.8
NC_015391:448833:4575814575814589751395Carnobacterium sp. 17-4 chromosome, complete genomeFeS cluster formation protein2e-1067.4
NC_014925:578759:5818735818735832701398Staphylococcus pseudintermedius HKU10-03 chromosome, completeIron-sulfur cluster assembly protein SufB2e-1067.4
NC_017275:1248875:1248875124887512500441170Sulfolobus islandicus HVE10/4 chromosome, complete genomeFeS assembly protein SufD2e-1067
NC_017341:903473:9249429249429263391398Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,ABC superfamily ATP binding cassette transporter, membrane protein2e-1067
NC_012622:1194347:1207677120767712088461170Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeFeS assembly protein SufD2e-1067
NC_011969:4655602:4664914466491446663111398Bacillus cereus Q1 chromosome, complete genomeiron-regulated ABC transporter2e-1067
NC_020995:477765:4808484808484822391392Enterococcus casseliflavus EC20, complete genomeFeS cluster assembly protein sufB3e-1066.6
NC_016935:1636278:1642696164269616440931398Paenibacillus mucilaginosus 3016 chromosome, complete genomeprotein SufB8e-1065.1
NC_015690:1109335:1114645111464511160421398Paenibacillus mucilaginosus KNP414 chromosome, complete genomeSufB8e-1065.1
NC_016629:3543432:3555541355554135567041164Desulfovibrio africanus str. Walvis Bay chromosome, completeSufBD protein3e-0963.5
NC_013926:321122:3401273401273414521326Aciduliprofundum boonei T469 chromosome, complete genomeSufBD protein3e-0963.2
NC_012622:1194347:1208833120883312102721440Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeFeS assembly protein SufB4e-0962.8
NC_017275:1248875:1250031125003112514701440Sulfolobus islandicus HVE10/4 chromosome, complete genomeFeS assembly protein SufB4e-0962.8
NC_016605:233087:2426142426142440201407Pediococcus claussenii ATCC BAA-344 chromosome, complete genomefeS assembly protein SufB4e-0962.8
NC_014727:1736500:1748149174814917495761428Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,fe-s cluster assembly ABC transporter permease6e-0962.4
NC_011529:766292:7858237858237869381116Thermococcus onnurineus NA1, complete genomehypothetical protein2e-0860.8
NC_012883:1522920:1544129154412915452621134Thermococcus sibiricus MM 739, complete genomeSufBD protein3e-0756.6
NC_008343:1470360:1476302147630214777981497Granulibacter bethesdensis CGDNIH1, complete genomeABC transporter-associated protein sufB6e-0755.5
NC_004663:4373902:4386999438699943884531455Bacteroides thetaiotaomicron VPI-5482, complete genomeABC transporter permease6e-0755.5
NC_009464:1397739:1413639141363914148591221Uncultured methanogenic archaeon RC-I, complete genomeputative Fe-S cluster assembly protein (SufB/D-like)2e-0654.3
NC_013642:1425795:1427427142742714285331107Thermotoga naphthophila RKU-10, complete genomeFeS assembly protein SufD1e-0654.3
NC_010483:1467616:1467616146761614687221107Thermotoga sp. RQ2, complete genomeFeS assembly protein SufD1e-0654.3
NC_009952:1680682:1694568169456816960791512Dinoroseobacter shibae DFL 12, complete genomesufB1e-0654.3
NC_016632:830000:8421118421118435741464Serratia symbiotica str. 'Cinara cedri' chromosome, completecysteine desulfurase activator complex subunit SufB3e-0653.5
NC_008319:2172928:2172928217292821743671440Synechococcus sp. CC9311, complete genomeFeS assembly protein SufB4e-0653.1
NC_009486:1403175:1403175140317514042811107Thermotoga petrophila RKU-1 chromosome, complete genomeFeS assembly protein SufD5e-0652.4
NC_013851:859396:8613518613518627961446Allochromatium vinosum DSM 180 chromosome, complete genomeFeS assembly protein SufB7e-0652