Pre_GI: BLASTP Hits

Some Help

Query: NC_009525:3128786:3146588 Mycobacterium tuberculosis H37Ra, complete genome

Start: 3146588, End: 3147475, Length: 888

Host Lineage: Mycobacterium tuberculosis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain (H37Ra; ATCC 25177) is an avirulent strain derived from its virulent parent strain H37 (isolated from a 19 year-old male patient with chronic pulmonary tuberculosis by Edward R. Baldwin in 1905). Causative agent of tuberculosis. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. This bacterium is the causative agent of tuberculosis - a chronic infectious disease with a growing incidence worldwide. It infects 1.7 billion people a year (~33% of the entire world population) and causes over 3 million deaths/year. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. The sluggish growth rate is a result of the tough cell wall that resists the passage of nutrients into the cell and inhibits waste products to be excreted out of the cell. The specialized cell envelope of this organism resembles a modified Gram positive cell wall. It also contains complex fatty acids, such as mycolic acids, that cause the waxy appearance and impermeability of the envelope. These acids are found bound to the cell envelope, but also form cord factors when linked with a carbohydrate component to form a cord-like structure. Primary infection occurs by inhalation of the organism in droplets that are aerosolized by an infected person. The organism initially replicates in cells of the terminal airways, after which it is taken up by, and replicates in, alveolar macrophages. Macrophages distribute the organism to other areas of the lungs and the regional lymph nodes. Once a cell-mediated hypersensitivity immune response develops, replication of the organism decreases and the bacteria become restricted to developing granulomas.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012943:1279228:127832912783291279231903Mycobacterium tuberculosis KZN 1435 chromosome, complete genomehypothetical protein2e-149528
NC_016804:3049631:306794730679473068834888Mycobacterium bovis BCG str. Mexico chromosome, complete genomehypothetical protein2e-149528
NC_012207:3063039:308135530813553082242888Mycobacterium bovis BCG str. Tokyo 172, complete genomehypothetical protein2e-149528
NC_008769:3070266:308858230885823089469888Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomehypothetical protein2e-149528
NC_002945:3073370:309116730911673092054888Mycobacterium bovis AF2122/97, complete genomehypothetical protein2e-149528
NC_000962:3116818:313459631345963135483888Mycobacterium tuberculosis H37Rv, complete genomehypothetical protein2e-149528
NC_009565:3128094:314623431462343147121888Mycobacterium tuberculosis F11, complete genomehypothetical protein2e-149528
NC_002755:3110929:312881031288103129757948Mycobacterium tuberculosis CDC1551, complete genomehypothetical protein3e-147521