Pre_GI: BLASTP Hits

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Query: NC_009525:3128786:3130192 Mycobacterium tuberculosis H37Ra, complete genome

Start: 3130192, End: 3131004, Length: 813

Host Lineage: Mycobacterium tuberculosis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain (H37Ra; ATCC 25177) is an avirulent strain derived from its virulent parent strain H37 (isolated from a 19 year-old male patient with chronic pulmonary tuberculosis by Edward R. Baldwin in 1905). Causative agent of tuberculosis. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. This bacterium is the causative agent of tuberculosis - a chronic infectious disease with a growing incidence worldwide. It infects 1.7 billion people a year (~33% of the entire world population) and causes over 3 million deaths/year. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. The sluggish growth rate is a result of the tough cell wall that resists the passage of nutrients into the cell and inhibits waste products to be excreted out of the cell. The specialized cell envelope of this organism resembles a modified Gram positive cell wall. It also contains complex fatty acids, such as mycolic acids, that cause the waxy appearance and impermeability of the envelope. These acids are found bound to the cell envelope, but also form cord factors when linked with a carbohydrate component to form a cord-like structure. Primary infection occurs by inhalation of the organism in droplets that are aerosolized by an infected person. The organism initially replicates in cells of the terminal airways, after which it is taken up by, and replicates in, alveolar macrophages. Macrophages distribute the organism to other areas of the lungs and the regional lymph nodes. Once a cell-mediated hypersensitivity immune response develops, replication of the organism decreases and the bacteria become restricted to developing granulomas.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016768:1279178:129456512945651295377813Mycobacterium tuberculosis KZN 4207 chromosome, complete genomehypothetical protein3e-132471
NC_012943:1279228:129462112946211295433813Mycobacterium tuberculosis KZN 1435 chromosome, complete genomehypothetical protein3e-132471
NC_000962:3116818:311822431182243119036813Mycobacterium tuberculosis H37Rv, complete genomehypothetical protein3e-132471
NC_009565:3128094:313017931301793130991813Mycobacterium tuberculosis F11, complete genomehypothetical protein3e-132471
NC_002755:3110929:311294231129423113754813Mycobacterium tuberculosis CDC1551, complete genomegeneral secretion pathway protein A-related protein3e-132471
NC_002945:3073370:307477430747743075586813Mycobacterium bovis AF2122/97, complete genomehypothetical protein4e-132470
NC_012207:3063039:306444530644453065257813Mycobacterium bovis BCG str. Tokyo 172, complete genomehypothetical protein4e-132470
NC_008769:3070266:307167230716723072484813Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomehypothetical protein4e-132470
NC_016804:3049631:305103730510373051849813Mycobacterium bovis BCG str. Mexico chromosome, complete genomehypothetical protein4e-132470
NC_017026:3110155:311206031120603113022963Mycobacterium tuberculosis RGTB327 chromosome, complete genomehypothetical protein4e-122437
NC_017904:2379387:242940224294022430214813Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein3e-113407
NC_014814:2588628:258925325892532590068816Mycobacterium sp. Spyr1 chromosome, complete genometype II secretory pathway, component ExeA ( ATPase)3e-81301
NC_014814:4235477:425918342591834259998816Mycobacterium sp. Spyr1 chromosome, complete genometype II secretory pathway, component ExeA ( ATPase)3e-81301
NC_008726:610000:612367612367613182816Mycobacterium vanbaalenii PYR-1, complete genomeAAA ATPase2e-80298
NC_008726:1776192:179515017951501795965816Mycobacterium vanbaalenii PYR-1, complete genomeAAA ATPase2e-80298
NC_013235:2257899:225836722583672259182816Nakamurella multipartita DSM 44233, complete genomegeneral secretion pathway protein-related protein3e-78291
NC_013235:4091185:410925741092574110162906Nakamurella multipartita DSM 44233, complete genomegeneral secretion pathway protein-related protein4e-73274
NC_007503:1111457:111470311147031115506804Carboxydothermus hydrogenoformans Z-2901, complete genomeISChy3, orf32e-41169
NC_007503:2338110:234166423416642342467804Carboxydothermus hydrogenoformans Z-2901, complete genomeISChy3, orf32e-41169
NC_006177:2883476:291682329168232917659837Symbiobacterium thermophilum IAM 14863, complete genomehypothetical protein1e-37156
NC_006177:2398482:243411924341192434955837Symbiobacterium thermophilum IAM 14863, complete genomehypothetical protein1e-37156
NC_014152:554656:559323559323560126804Thermincola sp. JR, complete genomeAAA ATPase1e-37156
NC_014152:2056991:207172820717282072531804Thermincola sp. JR, complete genomeAAA ATPase1e-37156
NC_006177:46745:682856828569121837Symbiobacterium thermophilum IAM 14863, complete genomehypothetical protein5e-37154
NC_014220:1670000:167619116761911676991801Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomehypothetical protein2e-32139
NC_020210:788639:793670793670794470801Geobacillus sp. GHH01, complete genomehypothetical protein2e-32139
NC_013411:334549:345709345709346509801Geobacillus sp. Y412MC61, complete genomeAAA ATPase3e-32138
NC_014915:2387639:239297823929782393778801Geobacillus sp. Y412MC52 chromosome, complete genomeAAA ATPase3e-32138
NC_020210:1275031:131571213157121316512801Geobacillus sp. GHH01, complete genomehypothetical protein4e-32138
NC_006510:887545:897613897613898413801Geobacillus kaustophilus HTA426, complete genomehypothetical protein4e-32138
NC_015660:1896904:189923518992351900035801Geobacillus thermoglucosidasius C56-YS93 chromosome, completeAAA ATPase9e-32137
NC_020210:1704500:173031717303171731117801Geobacillus sp. GHH01, complete genomehypothetical protein7e-32137
NC_020210:1704500:172380617238061724606801Geobacillus sp. GHH01, complete genomehypothetical protein1e-31136
NC_006510:795973:807415807415808215801Geobacillus kaustophilus HTA426, complete genomehypothetical protein1e-31136
NC_020210:2133996:218424821842482185048801Geobacillus sp. GHH01, complete genomeAAA ATPase4e-31135
NC_016593:3402205:340638334063833407183801Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeGeneral secretion pathway domain protein1e-30133
NC_009454:1246393:125843212584321259232801Pelotomaculum thermopropionicum SI, complete genometype II secretory pathway, component ExeA3e-30132
NC_015565:2408669:241362924136292414429801Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeAAA ATPase6e-30131
NC_016894:3935161:394330039433003944100801Acetobacterium woodii DSM 1030 chromosome, complete genomeAAA ATPase5e-29128
NC_007503:2243902:225209922520992253049951Carboxydothermus hydrogenoformans Z-2901, complete genomegeneral secretion pathway domain protein5e-29128
NC_019897:2004050:200777120077712008574804Thermobacillus composti KWC4 chromosome, complete genometype II secretory pathway protein ExeA3e-29128
NC_019897:3810000:384007138400713840874804Thermobacillus composti KWC4 chromosome, complete genometype II secretory pathway protein ExeA3e-29128
NC_019897:938921:958126958126958929804Thermobacillus composti KWC4 chromosome, complete genometype II secretory pathway protein ExeA3e-29128
NC_010321:2276000:227885222788522279652801Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeATPase AAA8e-29127
NC_010321:35855:543195431955119801Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeATPase AAA8e-29127
NC_014964:35862:543265432655126801Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeAAA ATPase8e-29127
NC_020210:788639:805696805696806496801Geobacillus sp. GHH01, complete genomeATPase2e-28126
NC_006510:372826:388610388610389410801Geobacillus kaustophilus HTA426, complete genomehypothetical protein2e-28126
NC_016593:2447938:247397224739722474772801Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeGeneral secretion pathway domain protein2e-28126
NC_016593:416661:431064431064431864801Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeGeneral secretion pathway domain protein2e-28126
NC_015757:1329012:135395413539541354622669Sulfobacillus acidophilus TPY chromosome, complete genomeAAA ATPase7e-28124
NC_010337:147664:173180173180173980801Heliobacterium modesticaldum Ice1, complete genomehypothetical protein2e-27122
NC_016593:1814500:184006818400681840868801Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeGeneral secretion pathway domain protein3e-27122
NC_016023:875416:889187889187889987801Bacillus coagulans 36D1 chromosome, complete genomeAAA ATPase5e-27121
NC_006177:280234:302205302205302891687Symbiobacterium thermophilum IAM 14863, complete genomehypothetical protein2e-26119
NC_014824:366000:384946384946385761816Ruminococcus albus 7 plasmid pRUMAL01, complete sequenceAAA ATPase3e-24112
NC_014216:2027017:2028593202859320295971005Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomeAAA ATPase5e-24111
NC_007517:2241104:2266711226671122678681158Geobacter metallireducens GS-15, complete genomeATPase2e-22105
NC_018870:1417851:143554214355421436297756Thermacetogenium phaeum DSM 12270 chromosome, complete genomeAAA+ type ATPase1e-21103
NC_014973:1071500:1085197108519710863511155Geobacter sp. M18 chromosome, complete genomeAAA ATPase5e-21101
NC_015572:1421782:1448291144829114493161026Methylomonas methanica MC09 chromosome, complete genomesecretion ATPase, PEP-CTERM locus subfamily3e-2099.4
NC_014973:1767798:178322217832221784106885Geobacter sp. M18 chromosome, complete genomeAAA ATPase2e-1996.3
NC_015565:287900:319804319804320561758Desulfotomaculum carboxydivorans CO-1-SRB chromosome, complete3e-1995.5
NC_016616:1336000:135596613559661356796831Dechlorosoma suillum PS chromosome, complete genometype II secretory pathway protein ExeA5e-1995.1
NC_009483:2640403:2732430273243027336021173Geobacter uraniireducens Rf4 chromosome, complete genomeATPase AAA2e-1892.8
NC_013939:1001974:100416310041631004975813Deferribacter desulfuricans SSM1, complete genomegeneral secretion pathway protein A3e-1892.4
NC_011769:820521:8276288276288288151188Desulfovibrio vulgaris str. 'Miyazaki F', complete genomesecretion ATPase, PEP-CTERM locus subfamily1e-1790.5
NC_010162:7824878:782888878288887829703816Sorangium cellulosum 'So ce 56', complete genomegeneral secretion pathway protein A fragment2e-1789.7
NC_010524:3914880:3916740391674039192352496Leptothrix cholodnii SP-6, complete genomesecretion ATPase, PEP-CTERM locus subfamily2e-1789.4
NC_007298:2568851:2589019258901925900951077Dechloromonas aromatica RCB, complete genomeATPas6e-1788.2
NC_014315:3004125:3022970302297030244721503Nitrosococcus watsoni C-113 chromosome, complete genomepeptidoglycan-binding lysin domain-containing protein9e-1787.4
NC_013194:69634:935609356094354795Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeAAA ATPase2e-1686.7
NC_013960:3379515:338417133841713385166996Nitrosococcus halophilus Nc4 chromosome, complete genomesecretion ATPase, PEP-CTERM locus subfamily2e-1686.3
NC_010337:1561430:158468015846801585324645Heliobacterium modesticaldum Ice1, complete genomehypothetical protein2e-1686.3
NC_013194:2020134:203774220377422038536795Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeAAA ATPase5e-1685.1
NC_013194:1040197:105806810580681058862795Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeAAA ATPase5e-1685.1
NC_013194:4964000:499775549977554998549795Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeAAA ATPase5e-1685.1
NC_013194:1631134:163198616319861632780795Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeAAA ATPase5e-1685.1
NC_008789:1641774:1645072164507216461871116Halorhodospira halophila SL1, complete genomeAAA ATPase7e-1684.3
NC_015388:269301:3081923081923093311140Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeAAA ATPase2e-1583.6
NC_008789:350650:371418371418372293876Halorhodospira halophila SL1, complete genomeAAA ATPase3e-1582.4
NC_008435:1215437:123744212374421238284843Rhodopseudomonas palustris BisA53, complete genomeAAA ATPase8e-1581.3
NC_014910:755192:7778727778727789721101Alicycliphilus denitrificans BC chromosome, complete genomesecretion atpase, pep-cterm locus subfamily6e-1581.3
NC_015422:704500:7171997171997182991101Alicycliphilus denitrificans K601 chromosome, complete genomesecretion ATPase6e-1581.3
NC_014220:1670000:168122516812251681671447Syntrophothermus lipocalidus DSM 12680 chromosome, complete genome1e-1480.5
NC_011146:1998981:2043420204342020445381119Geobacter bemidjiensis Bem, complete genomesecretion ATPase, PEP-CTERM locus subfamily3e-1479.3
NC_014220:1732254:174613217461321746536405Syntrophothermus lipocalidus DSM 12680 chromosome, complete genome5e-1478.6
NC_016593:1814500:181477218147721815323552Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeGeneral secretion pathway domain protein1e-1376.6
NC_015554:817500:8194968194968205631068Alteromonas sp. SN2 chromosome, complete genomeputative general secretion pathway protein A2e-1376.3
NC_015724:166246:176974176974177768795Cupriavidus necator N-1 plasmid BB2p, complete sequenceATPase AAA3e-1272.4
NC_015757:2890479:289459028945902894955366Sulfobacillus acidophilus TPY chromosome, complete genomehypothetical protein3e-1169.3
NC_020541:3156500:3218681321868132197451065Rhodanobacter sp. 2APBS1, complete genomeputative secretion ATPase, PEP-CTERM locus subfamily1e-1067
NC_012108:2159230:218028121802812181126846Desulfobacterium autotrophicum HRM2, complete genomeExeA16e-0858.2
NC_012108:4971086:501666650166665017511846Desulfobacterium autotrophicum HRM2, complete genomeExeA56e-0858.2