Pre_GI: BLASTP Hits

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Query: NC_009525:2635792:2638685 Mycobacterium tuberculosis H37Ra, complete genome

Start: 2638685, End: 2640223, Length: 1539

Host Lineage: Mycobacterium tuberculosis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain (H37Ra; ATCC 25177) is an avirulent strain derived from its virulent parent strain H37 (isolated from a 19 year-old male patient with chronic pulmonary tuberculosis by Edward R. Baldwin in 1905). Causative agent of tuberculosis. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. This bacterium is the causative agent of tuberculosis - a chronic infectious disease with a growing incidence worldwide. It infects 1.7 billion people a year (~33% of the entire world population) and causes over 3 million deaths/year. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. The sluggish growth rate is a result of the tough cell wall that resists the passage of nutrients into the cell and inhibits waste products to be excreted out of the cell. The specialized cell envelope of this organism resembles a modified Gram positive cell wall. It also contains complex fatty acids, such as mycolic acids, that cause the waxy appearance and impermeability of the envelope. These acids are found bound to the cell envelope, but also form cord factors when linked with a carbohydrate component to form a cord-like structure. Primary infection occurs by inhalation of the organism in droplets that are aerosolized by an infected person. The organism initially replicates in cells of the terminal airways, after which it is taken up by, and replicates in, alveolar macrophages. Macrophages distribute the organism to other areas of the lungs and the regional lymph nodes. Once a cell-mediated hypersensitivity immune response develops, replication of the organism decreases and the bacteria become restricted to developing granulomas.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015848:2684275:2685884268588426874221539Mycobacterium canettii CIPT 140010059, complete genomeputative membrane-associated phospholipase C 2 PLCB0939
NC_016768:1769332:1786132178613217876971566Mycobacterium tuberculosis KZN 4207 chromosome, complete genomemembrane-associated phospholipase C 2 plcB0937
NC_012943:1769445:1786245178624517878101566Mycobacterium tuberculosis KZN 1435 chromosome, complete genomemembrane-associated phospholipase C 2 plcB0937
NC_016768:1769332:1784379178437917859411563Mycobacterium tuberculosis KZN 4207 chromosome, complete genomemembrane-associated phospholipase C 1 plcA0724
NC_012943:1769445:1784492178449217860541563Mycobacterium tuberculosis KZN 1435 chromosome, complete genomemembrane-associated phospholipase C 1 plcA0724
NC_015848:2684275:2687640268764026891781539Mycobacterium canettii CIPT 140010059, complete genomeputative membrane-associated phospholipase C 1 PLCA0723
NC_009525:2635792:2640441264044126419791539Mycobacterium tuberculosis H37Ra, complete genomemembrane-associated phospholipase C 10723
NC_010612:4501414:4503965450396545055271563Mycobacterium marinum M, complete genomemembrane-associated phospholipase C 2 PlcB_40709
NC_016768:1769332:1787756178775617893061551Mycobacterium tuberculosis KZN 4207 chromosome, complete genomephospholipase C 3 plcC0636
NC_012943:1769445:1787869178786917894191551Mycobacterium tuberculosis KZN 1435 chromosome, complete genomephospholipase C 3 plcC0636
NC_015848:2684275:2684275268427526858011527Mycobacterium canettii CIPT 140010059, complete genomeputative phospholipase C 3 PLCC0635
NC_009525:2635792:2637076263707626386021527Mycobacterium tuberculosis H37Ra, complete genomephospholipase C 3 PlcC0635
NC_010612:4501414:4502018450201845035681551Mycobacterium marinum M, complete genomemembrane-associated phospholipase C 2 PlcB_50633
NC_016111:3659269:3660420366042036618351416Streptomyces cattleya NRRL 8057, complete genomeNon-hemolytic phospholipase C1e-79297
NC_012721:2556160:2583724258372425857902067Burkholderia glumae BGR1 chromosome 2, complete genomeTwin-arginine translocation pathway signal1e-72274
NC_018681:5695343:5734401573440157358401440Nocardia brasiliensis ATCC 700358 chromosome, complete genomePhospholipase C7e-71268
NC_013929:1537980:1541644154164415436622019Streptomyces scabiei 87.22 chromosome, complete genomephospholipase C3e-68259
NC_007435:1914375:1917409191740919196582250Burkholderia pseudomallei 1710b chromosome II, complete sequencephospholipase C3e-64246
NC_009075:92210:9547895478976732196Burkholderia pseudomallei 668 chromosome II, complete sequencenon-hemolytic phospholipase C (Precursor)3e-64246
NC_009078:74954:7824378243804382196Burkholderia pseudomallei 1106a chromosome II, complete sequenceNon-hemolytic phospholipase C6e-64245
NC_006351:73000:7617476174783692196Burkholderia pseudomallei K96243 chromosome 2, complete sequencephospholipase C precursor8e-64244
NC_015856:764651:7878857878857903592475Collimonas fungivorans Ter331 chromosome, complete genomephosphoesterase1e-62241
NC_006512:2789098:2791506279150627935452040Idiomarina loihiensis L2TR, complete genomePhospholipase C1e-61237
NC_007650:84140:8657386573888222250Burkholderia thailandensis E264 chromosome II, complete sequencephospholipase C8e-60231
NC_015566:4662171:4664013466401346661602148Serratia sp. AS12 chromosome, complete genomephospholipase C, phosphocholine-specific1e-58228
NC_008314:1202963:1205830120583012080102181Ralstonia eutropha H16 chromosome 2, complete sequencePhospholipase C3e-54213
NC_014816:545441:5693835693835714552073Asticcacaulis excentricus CB 48 chromosome 1, complete sequencephospholipase c, phosphocholine-specific3e-54213
NC_015856:29338:4683446834492992466Collimonas fungivorans Ter331 chromosome, complete genomenon-hemolytic phospholipase C1e-49197
NC_009485:1222697:1238891123889112412392349Bradyrhizobium sp. BTAi1 chromosome, complete genomenon-hemolytic phospholipase C2e-48194
NC_017075:2293209:2304161230416123065212361Rubrivivax gelatinosus IL144, complete genomephospholipase C1e-44181
NC_012483:3144689:3164547316454731670602514Acidobacterium capsulatum ATCC 51196, complete genomeTat pathway signal sequence domain protein2e-37157
NC_016609:3576490:3577020357702035795602541Niastella koreensis GR20-10 chromosome, complete genomephospholipase C, phosphocholine-specific3e-32140
NC_010162:9727465:9731579973157997328081230Sorangium cellulosum 'So ce 56', complete genomephosphoesterase precursor5e-23109
NC_013061:2775623:2778967277896727802831317Pedobacter heparinus DSM 2366, complete genomeacid phosphatase8e-1892.4
NC_017276:2240069:2255775225577522573041530Sulfolobus islandicus REY15A chromosome, complete genomephosphoesterase3e-1480.5
NC_017275:2364948:2377093237709323786221530Sulfolobus islandicus HVE10/4 chromosome, complete genomephosphoesterase3e-1480.5
NC_012589:2457385:2470512247051224720411530Sulfolobus islandicus L.S.2.15, complete genomephosphoesterase5e-1479.7
NC_012623:192455:1931031931031946321530Sulfolobus islandicus Y.N.15.51 chromosome, complete genomephosphoesterase6e-1479.3
NC_013769:2445245:2456495245649524580241530Sulfolobus islandicus L.D.8.5 chromosome, complete genomephosphoesterase8e-1479
NC_012726:2318000:2331431233143123329601530Sulfolobus islandicus M.16.4 chromosome, complete genomephosphoesterase8e-1479
NC_010625:1551430:1585835158583515873251491Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencePhospholipase C3e-1377