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Query: NC_009525:1872360:1874157 Mycobacterium tuberculosis H37Ra, complete genome

Start: 1874157, End: 1875569, Length: 1413

Host Lineage: Mycobacterium tuberculosis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain (H37Ra; ATCC 25177) is an avirulent strain derived from its virulent parent strain H37 (isolated from a 19 year-old male patient with chronic pulmonary tuberculosis by Edward R. Baldwin in 1905). Causative agent of tuberculosis. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. This bacterium is the causative agent of tuberculosis - a chronic infectious disease with a growing incidence worldwide. It infects 1.7 billion people a year (~33% of the entire world population) and causes over 3 million deaths/year. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. The sluggish growth rate is a result of the tough cell wall that resists the passage of nutrients into the cell and inhibits waste products to be excreted out of the cell. The specialized cell envelope of this organism resembles a modified Gram positive cell wall. It also contains complex fatty acids, such as mycolic acids, that cause the waxy appearance and impermeability of the envelope. These acids are found bound to the cell envelope, but also form cord factors when linked with a carbohydrate component to form a cord-like structure. Primary infection occurs by inhalation of the organism in droplets that are aerosolized by an infected person. The organism initially replicates in cells of the terminal airways, after which it is taken up by, and replicates in, alveolar macrophages. Macrophages distribute the organism to other areas of the lungs and the regional lymph nodes. Once a cell-mediated hypersensitivity immune response develops, replication of the organism decreases and the bacteria become restricted to developing granulomas.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017026:1865046:1867763186776318691751413Mycobacterium tuberculosis RGTB327 chromosome, complete genomeargininosuccinate lyase0767
NC_016804:1846388:1848185184818518495971413Mycobacterium bovis BCG str. Mexico chromosome, complete genomeargininosuccinate lyase0767
NC_012207:1848091:1850808185080818522201413Mycobacterium bovis BCG str. Tokyo 172, complete genomeargininosuccinate lyase0767
NC_008769:1876109:1877906187790618793181413Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomeputative Argininosuccinate lyase argH0767
NC_002945:1856228:1858025185802518594371413Mycobacterium bovis AF2122/97, complete genomeargininosuccinate lyase0767
NC_000962:1870842:1872639187263918740511413Mycobacterium tuberculosis H37Rv, complete genomeargininosuccinate lyase0767
NC_009565:1866214:1868029186802918694411413Mycobacterium tuberculosis F11, complete genomeargininosuccinate lyase argH0767
NC_002755:1859630:1863545186354518649571413Mycobacterium tuberculosis CDC1551, complete genomeargininosuccinate lyase0766
NC_015848:1896660:1899377189937719007891413Mycobacterium canettii CIPT 140010059, complete genomeputative argininosuccinate lyase argH0765
NC_019950:1870863:1873580187358018749921413Mycobacterium canettii CIPT 140060008 complete genomePutative argininosuccinate lyase ArgH0765
NC_012803:1552122:1570646157064615721061461Micrococcus luteus NCTC 2665, complete genomeargininosuccinate lyase2e-148525
NC_015588:1463628:1467722146772214691551434Isoptericola variabilis 225 chromosome, complete genomeArgininosuccinate lyase9e-135480
NC_013510:2521186:2524483252448325259011419Thermomonospora curvata DSM 43183, complete genomeargininosuccinate lyase4e-121435
NC_014616:1296287:1299629129962913011161488Bifidobacterium bifidum S17 chromosome, complete genomeargininosuccinate lyase3e-116419
NC_014638:1333976:1339109133910913405961488Bifidobacterium bifidum PRL2010 chromosome, complete genomeargininosuccinate lyase ArgH3e-116419
NC_018720:1336839:1364855136485513663211467Bifidobacterium asteroides PRL2011 chromosome, complete genomeargininosuccinate lyase2e-116419
NC_014758:245707:2626182626182640061389Calditerrivibrio nitroreducens DSM 19672 chromosome, completeargininosuccinate lyase4e-83309
NC_014483:4772856:4780824478082447822361413Paenibacillus polymyxa E681 chromosome, complete genomeArgininosuccinate lyase (Arginosuccinase) (ASAL)9e-82304
NC_011296:530408:5372145372145385901377Thermodesulfovibrio yellowstonii DSM 11347, complete genomeargininosuccinate lyase2e-80300
NC_009454:489954:5081165081165094981383Pelotomaculum thermopropionicum SI, complete genomeargininosuccinate lyase2e-79296
NC_014829:4511738:4530239453023945316241386Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeargininosuccinate lyase6e-79295
NC_014393:1590893:1613589161358916149681380Clostridium cellulovorans 743B chromosome, complete genomeargininosuccinate lyase1e-78294
NC_006177:520055:5243435243435257281386Symbiobacterium thermophilum IAM 14863, complete genomeargininosuccinate lyase1e-78294
NC_009662:645871:6603186603186617061389Nitratiruptor sp. SB155-2, complete genomeargininosuccinate lyase1e-77291
NC_001263:662666:6867156867156881811467Deinococcus radiodurans R1 chromosome 1, complete sequenceargininosuccinate lyase3e-77289
NC_018868:2615822:2638802263880226401961395Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeargininosuccinate lyase1e-75284
NC_020995:3300751:3317915331791533192941380Enterococcus casseliflavus EC20, complete genomeargininosuccinate lyase2e-75283
NC_015555:211935:2246232246232259511329Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeArgininosuccinate lyase3e-75283
NC_002939:173833:1738331738331752091377Geobacter sulfurreducens PCA, complete genomeargininosuccinate lyase6e-75281
NC_009714:1404000:1422761142276114241431383Campylobacter hominis ATCC BAA-381, complete genomeargininosuccinate lyase2e-74280
NC_013740:660880:7024017024017038191419Acidaminococcus fermentans DSM 20731, complete genomeargininosuccinate lyase7e-74278
NC_015958:2527376:2526079252607925273951317Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeArgininosuccinate lyase9e-74277
NC_010498:1117938:1142343114234311437191377Escherichia coli SMS-3-5, complete genomeargininosuccinate lyase ArgH-like protein1e-73277
NC_004113:350059:3639723639723653631392Thermosynechococcus elongatus BP-1, complete genomeargininosuccinate lyase2e-73276
NC_021184:569653:5762765762765776461371Desulfotomaculum gibsoniae DSM 7213, complete genomeargininosuccinate lyase2e-73276
NC_015161:523278:5409885409885423971410Deinococcus proteolyticus MRP chromosome, complete genomeArgininosuccinate lyase9e-73274
NC_007604:2555000:2556692255669225581161425Synechococcus elongatus PCC 7942, complete genomeargininosuccinate lyase1e-72274
NC_016148:576946:5769465769465783551410Thermovirga lienii DSM 17291 chromosome, complete genomeargininosuccinate lyase2e-72273
NC_015385:456000:4769354769354783741440Treponema succinifaciens DSM 2489 chromosome, complete genomeArgininosuccinate lyase2e-72273
NC_017068:2055500:2070200207020020716181419Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative argininosuccinate lyase3e-72272
NC_010321:244371:2662032662032675281326Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeargininosuccinate lyase4e-72272
NC_006576:1743500:1758668175866817600681401Synechococcus elongatus PCC 6301, complete genomeargininosuccinate lyase7e-72271
NC_014727:798191:8009268009268023081383Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,argininosuccinate lyase2e-71270
NC_015760:2009425:2026401202640120278131413Streptococcus salivarius CCHSS3, complete genomeargininosuccinate lyase9e-71268
NC_006448:1604627:1619892161989216213671476Streptococcus thermophilus LMG 18311, complete genomeargininosuccinate lyase1e-70267
NC_006449:1606948:1622203162220316236781476Streptococcus thermophilus CNRZ1066, complete genomeargininosuccinate lyase1e-70267
NC_017514:1568591:1591086159108615924621377Neisseria meningitidis M01-240149 chromosome, complete genomeargininosuccinate lyase1e-70267
NC_017516:1613762:1632812163281216341881377Neisseria meningitidis H44/76 chromosome, complete genomeargininosuccinate lyase4e-70265
NC_017515:1601954:1620821162082116221971377Neisseria meningitidis M04-240196 chromosome, complete genomeargininosuccinate lyase4e-70265
NC_017505:670919:6709196709196722951377Neisseria meningitidis alpha710 chromosome, complete genomeputative argininosuccinate lyase4e-70265
NC_010120:609323:6093236093236106991377Neisseria meningitidis 053442, complete genomeargininosuccinate lyase4e-70265
NC_008767:613394:6133946133946147701377Neisseria meningitidis FAM18, complete genomeputative argininosuccinate lyase5e-70265
NC_014311:1106871:1120491112049111219061416Ralstonia solanacearum PSI07 chromosome, complete genomeargininosuccinate lyase2e-68260
NC_014931:1642179:1669303166930316707001398Variovorax paradoxus EPS chromosome, complete genomeargininosuccinate lyase1e-68260
NC_003366:842000:8590748590748604741401Clostridium perfringens str. 13, complete genomeargininosuccinate lyase7e-68258
NC_008054:745704:7514027514027527061305Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, complete1e-67257
NC_003030:1097625:1121793112179311231061314Clostridium acetobutylicum ATCC 824, complete genomeArgininosuccinate lyase2e-67256
NC_015687:1097447:1121614112161411229271314Clostridium acetobutylicum DSM 1731 chromosome, complete genomeargininosuccinate lyase2e-67256
NC_016593:2851243:2851243285124328526641422Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeargininosuccinate lyase1e-66254
NC_013411:735838:7528997528997543441446Geobacillus sp. Y412MC61, complete genomeargininosuccinate lyase3e-66253
NC_006510:2778777:2778777277877727801981422Geobacillus kaustophilus HTA426, complete genomeargininosuccinate lyase2e-66253
NC_014915:2847680:2848213284821328495921380Geobacillus sp. Y412MC52 chromosome, complete genomeargininosuccinate lyase2e-66253
NC_014206:771765:7886777886777900981422Geobacillus sp. C56-T3 chromosome, complete genomeargininosuccinate lyase2e-66253
NC_017243:2857681:2893943289394328953311389Brachyspira intermedia PWS/A chromosome, complete genomeargininosuccinate lyase4e-66252
NC_015557:114648:1460661460661474391374Hydrogenobaculum sp. 3684 chromosome, complete genomeargininosuccinate lyase1e-65251
NC_015587:114684:1461021461021474751374Hydrogenobaculum sp. SHO chromosome, complete genomeArgininosuccinate lyase1e-65251
NC_020411:114683:1461011461011474741374Hydrogenobaculum sp. HO, complete genomeargininosuccinate lyase1e-65251
NC_008536:3160540:3177509317750931788911383Solibacter usitatus Ellin6076, complete genomeargininosuccinate lyase2e-65250
NC_014377:149288:1492881492881506041317Thermosediminibacter oceani DSM 16646 chromosome, complete genomeargininosuccinate lyase4e-65249
NC_011661:1807101:1814455181445518158941440Dictyoglomus turgidum DSM 6724, complete genomeargininosuccinate lyase3e-65249
NC_011126:129937:1426091426091439851377Hydrogenobaculum sp. Y04AAS1, complete genomeargininosuccinate lyase8e-65248
NC_004557:558500:5814255814255827411317Clostridium tetani E88, complete genomeargininosuccinate lyase2e-64246
NC_012912:4428111:4429843442984344312161374Dickeya zeae Ech1591, complete genomeargininosuccinate lyase1e-63244
NC_007955:1108000:1108083110808311095581476Methanococcoides burtonii DSM 6242, complete genomeargininosuccinate lyase1e-58228
NC_009697:2714668:2731199273119927325211323Clostridium botulinum A str. ATCC 19397 chromosome, completeargininosuccinate lyase3e-58226
NC_009698:2649453:2668126266812626694481323Clostridium botulinum A str. Hall chromosome, complete genomeargininosuccinate lyase3e-58226
NC_017297:2854934:2866203286620328675251323Clostridium botulinum F str. 230613 chromosome, complete genomeargininosuccinate lyase3e-58226
NC_010520:2860960:2879649287964928809711323Clostridium botulinum A3 str. Loch Maree, complete genomeargininosuccinate lyase5e-58225
NC_013407:10953:1658616586180581473Methanocaldococcus vulcanius M7, complete genomeargininosuccinate lyase6e-58225
NC_004545:15650:5510755107564831377Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomeargininosuccinate lyase6e-56218
NC_015320:211147:2325012325012339611461Archaeoglobus veneficus SNP6 chromosome, complete genomeArgininosuccinate lyase2e-55216
NC_000916:191561:2055422055422069481407Methanothermobacter thermautotrophicus str. Delta H, completeargininosuccinate lyase2e-53210
NC_015662:15641:3753537535388661332Buchnera aphidicola (Cinara tujafilina) chromosome, completeargininosuccinate lyase5e-53209
NC_014507:2276000:2297415229741522988931479Methanoplanus petrolearius DSM 11571 chromosome, complete genomeargininosuccinate lyase1e-52207
NC_007681:696252:7237907237907251871398Methanosphaera stadtmanae DSM 3091, complete genomeArgH1e-52207
NC_014122:773825:7933457933457947961452Methanocaldococcus infernus ME chromosome, complete genomeargininosuccinate lyase4e-52206
NC_014658:417537:4254034254034268121410Methanothermus fervidus DSM 2088 chromosome, complete genomeargininosuccinate lyase3e-50199
NC_015574:1845000:1854936185493618563661431Methanobacterium sp. SWAN-1 chromosome, complete genomeArgininosuccinate lyase5e-49195
NC_015954:463500:4780354780354795791545Halophilic archaeon DL31 chromosome, complete genomeArgininosuccinate lyase3e-48193
NC_013501:1881692:1881692188169218830111320Rhodothermus marinus DSM 4252, complete genomeargininosuccinate lyase1e-42174
NC_016001:2421580:2433183243318324344631281Flavobacterium branchiophilum, complete genomeargininosuccinate lyase2e-34147
NC_002754:537792:5535065535065548851380Sulfolobus solfataricus P2, complete genomeargininosuccinate lyase2e-31137
NC_007948:4620661:4627855462785546293541500Polaromonas sp. JS666, complete genomeargininosuccinate lyase1e-30135
NC_008254:611437:6233376233376248451509Mesorhizobium sp. BNC1, complete genomeargininosuccinate lyase2e-30134
NC_012588:1394103:1398342139834213997211380Sulfolobus islandicus M.14.25 chromosome, complete genomeargininosuccinate lyase1e-29131
NC_012726:1382095:1386334138633413877131380Sulfolobus islandicus M.16.4 chromosome, complete genomeargininosuccinate lyase1e-29131
NC_012589:1482075:1486314148631414876931380Sulfolobus islandicus L.S.2.15, complete genomeargininosuccinate lyase1e-29131
NC_017275:1436875:1441114144111414424481335Sulfolobus islandicus HVE10/4 chromosome, complete genomeargininosuccinate lyase1e-29131
NC_017276:1285824:1290063129006312913971335Sulfolobus islandicus REY15A chromosome, complete genomeargininosuccinate lyase1e-29131
NC_013769:1478546:1482785148278514841191335Sulfolobus islandicus L.D.8.5 chromosome, complete genomeargininosuccinate lyase9e-30131
NC_012623:1167289:1181026118102611824051380Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeargininosuccinate lyase2e-29130
NC_012632:1518520:1522759152275915240931335Sulfolobus islandicus M.16.27 chromosome, complete genomeargininosuccinate lyase2e-29130
NC_012622:1371448:1375687137568713770211335Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeargininosuccinate lyase3e-29130
NC_007181:1364522:1379015137901513803581344Sulfolobus acidocaldarius DSM 639, complete genomeargininosuccinate lyase4e-27123
NC_003106:1484768:1498456149845614997961341Sulfolobus tokodaii str. 7, complete genomeargininosuccinate lyase4e-27122
NC_009440:1908864:1922187192218719235331347Metallosphaera sedula DSM 5348 chromosome, complete genomeargininosuccinate lyase4e-26119
NC_015435:251958:2630792630792644251347Metallosphaera cuprina Ar-4 chromosome, complete genomeargininosuccinate lyase7e-26118
NC_015518:997707:1006713100671310080501338Acidianus hospitalis W1 chromosome, complete genomeargininosuccinate lyase9e-26118
NC_007948:4620661:4634664463466446362051542Polaromonas sp. JS666, complete genomeargininosuccinate lyase1e-24114
NC_009717:271385:2732142732142747311518Xanthobacter autotrophicus Py2 plasmid pXAUT01, complete sequencefumarate lyase4e-24112
NC_007974:785216:7906507906507921521503Ralstonia metallidurans CH34 chromosome 2, complete sequenceargininosuccinate lyase3e-23110
NC_014335:3288500:3301968330196833034761509Bacillus cereus biovar anthracis str. CI chromosome, completeargininosuccinate lyase2e-20100
NC_011773:3371989:3392116339211633936241509Bacillus cereus AH820 chromosome, complete genomeargininosuccinate lyase3e-1997.1
NC_008697:118859:1458201458201473221503Nocardioides sp. JS614 plasmid pNOCA01, complete sequenceArgininosuccinate lyase1e-1894.7
NC_009717:271385:2915482915482929991452Xanthobacter autotrophicus Py2 plasmid pXAUT01, complete sequenceargininosuccinate lyase1e-1791.7
NC_002689:979191:9791919791919805041314Thermoplasma volcanium GSS1, complete genomeargininosuccinate lyase4e-1789.7
NC_003413:214120:2240912240912254701380Pyrococcus furiosus DSM 3638, complete genomeargininosuccinate lyase5e-1789.4
NC_017096:260333:2734062734062745991194Caldisericum exile AZM16c01, complete genomeputative argininosuccinate lyase2e-1687.4
NC_013172:542896:5551395551395576102472Brachybacterium faecium DSM 4810, complete genomeargininosuccinate lyase2e-1584.3
NC_016510:1999621:2002394200239420037041311Flavobacterium columnare ATCC 49512 chromosome, complete genomeargininosuccinate lyase2e-1584.3