Pre_GI: BLASTP Hits

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Query: NC_009515:510121:514090 Methanobrevibacter smithii ATCC 35061, complete genome

Start: 514090, End: 515544, Length: 1455

Host Lineage: Methanobrevibacter smithii; Methanobrevibacter; Methanobacteriaceae; Methanobacteriales; Euryarchaeota; Archaea

General Information: Methanobrevibacter smithii ATCC 35061 (DSM 861) (strain PS) was isolated from a sewage digester in Gainesville, Florida, USA. Sewage digester isolate. Human gut methanogen. Methanobrevibacter smithii can be isolated from anoxic environments such as anaerobic digesters, anaerobic soil and sediment, and the gastrointestinal tracts of humans, ruminants and other animals. This organism is the dominant archaeal symbiont found in the human gut.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013410:2519441:2546831254683125483061476Fibrobacter succinogenes subsp. succinogenes S85 chromosome,transcriptional regulator4e-39162
NC_010803:1573849:1572330157233015738561527Chlorobium limicola DSM 245, complete genomeputative transcriptional regulator1e-37158
NC_011832:913994:9406669406669421681503Candidatus Methanosphaerula palustris E1-9c, complete genomeputative transcriptional regulator3e-37156
NC_012804:903539:9189099189099204051497Thermococcus gammatolerans EJ3, complete genomeTranscription regulator, HTH/deoR family4e-26119
NC_016051:241438:2647172647172660571341Thermococcus sp. AM4 chromosome, complete genomeATP-dependent DNA helicase2e-25117
NC_004663:4273143:4275431427543142768881458Bacteroides thetaiotaomicron VPI-5482, complete genomeATP-dependent DNA helicase recG1e-24114
NC_015216:1102837:1124530112453011258881359Methanobacterium sp. AL-21 chromosome, complete genomeputative transcriptional regulator1e-23111
NC_019977:302454:3112663112663126121347Methanomethylovorans hollandica DSM 15978, complete genomeputative transcriptional regulator with HTH domain2e-23110
NC_015387:1091403:1097493109749310988991407Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeputative transcriptional regulator2e-22107
NC_017342:1012555:1038341103834110397771437Staphylococcus aureus subsp. aureus TCH60 chromosome, completedivergent AAA domain-containing protein7e-21102
NC_016610:1310275:1338268133826813397311464Tannerella forsythia ATCC 43037 chromosome, complete genomedivergent AAA domain-containing protein1e-20101
NC_008639:2968000:2983953298395329853621410Chlorobium phaeobacteroides DSM 266, complete genomeputative transcriptional regulator2e-20100
NC_008578:889907:9001829001829015851404Acidothermus cellulolyticus 11B, complete genomeputative transcriptional regulator6e-2099.4
NC_009483:3173464:3173464317346431751491686Geobacter uraniireducens Rf4 chromosome, complete genomeputative transcriptional regulator2e-1997.4
NC_014033:1215790:1237105123710512385381434Prevotella ruminicola 23 chromosome, complete genomedivergent AAA domain-containing protein8e-1995.5
NC_008639:1573971:1588824158882415903081485Chlorobium phaeobacteroides DSM 266, complete genomeputative transcriptional regulator1e-1894.7
NC_014033:1152994:1174275117427511756961422Prevotella ruminicola 23 chromosome, complete genomedivergent AAA domain-containing protein2e-1894.4
NC_010655:373437:3876163876163889831368Akkermansia muciniphila ATCC BAA-835, complete genomeputative transcriptional regulator4e-1893.2
NC_011832:619874:6332876332876346571371Candidatus Methanosphaerula palustris E1-9c, complete genomeputative transcriptional regulator1e-1791.3
NC_015635:4097711:4115606411560641170511446Microlunatus phosphovorus NM-1, complete genomehypothetical protein3e-1790.5
NC_008054:245184:263819263819264784966Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completePutative transcriptional regulator (Crp family)2e-1687.8
NC_014394:942015:9428179428179443131497Gallionella capsiferriformans ES-2 chromosome, complete genomeputative transcriptional regulator2e-1687.8
NC_015437:816719:8290348290348305061473Selenomonas sputigena ATCC 35185 chromosome, complete genomeputative transcriptional regulator1e-1585.1
NC_016609:5890292:5930616593061659319801365Niastella koreensis GR20-10 chromosome, complete genomeputative transcriptional regulator1e-1584.7
NC_014614:356746:3567463567463580441299Clostridium sticklandii, complete genomehypothetical protein1e-1584.7
NC_014815:658893:6685076685076702941788Micromonospora sp. L5 chromosome, complete genometranscriptional regulator2e-1584.7
NC_015977:2807782:2823521282352128249361416Roseburia hominis A2-183 chromosome, complete genomeputative transcriptional regulator2e-1584
NC_010995:4338860:4354146435414643556061461Cellvibrio japonicus Ueda107, complete genomeATP-dependent DNA helicase2e-1584
NC_013192:232778:2366962366962381591464Leptotrichia buccalis DSM 1135, complete genomeputative transcriptional regulator4e-1583.2
NC_015873:924392:9569229569229584361515Megasphaera elsdenii DSM 20460, complete genomehypothetical protein4e-1583.2
NC_013410:1152188:1167781116778111693191539Fibrobacter succinogenes subsp. succinogenes S85 chromosome,transcriptional regulator8e-1582
NC_014614:1166009:1188968118896811902751308Clostridium sticklandii, complete genomehypothetical protein1e-1481.6
NC_015167:2663686:2676821267682126782241404Cellulophaga lytica DSM 7489 chromosome, complete genomeArsR family transcriptional regulator2e-1480.9
NC_015873:924392:964272964272965096825Megasphaera elsdenii DSM 20460, complete genomehypothetical protein3e-1480.5
NC_015977:935798:950682950682951569888Roseburia hominis A2-183 chromosome, complete genomehypothetical protein3e-1480.5
NC_016610:1138995:1145146114514611464951350Tannerella forsythia ATCC 43037 chromosome, complete genomedivergent AAA domain-containing protein3e-1480.5
NC_009921:8717659:8724418872441887261661749Frankia sp. EAN1pec, complete genomeputative transcriptional regulator6e-1479.3
NC_015703:4933430:4968265496826549697251461Runella slithyformis DSM 19594 chromosome, complete genomeputative transcriptional regulator8e-1479
NC_015436:1322087:1333234133323413346701437Spirochaeta coccoides DSM 17374 chromosome, complete genomeputative transcriptional regulator8e-1479
NC_014246:1991093:2003133200313320045751443Mobiluncus curtisii ATCC 43063 chromosome, complete genometranscriptional regulator2e-1377.4
NC_009767:2051203:2069909206990920710691161Roseiflexus castenholzii DSM 13941, complete genomeputative transcriptional regulator3e-1377
NC_015676:1009298:1024766102476610262351470Methanosalsum zhilinae DSM 4017 chromosome, complete genomeputative transcriptional regulator3e-1377
NC_016943:2054688:2065953206595320671281176Blastococcus saxobsidens DD2, complete genomeputative transcriptional regulator9e-1375.5
NC_008782:3800500:3802582380258238038501269Acidovorax sp. JS42, complete genomeputative transcriptional regulator8e-1375.5
NC_015437:438538:4568434568434583301488Selenomonas sputigena ATCC 35185 chromosome, complete genomeputative transcriptional regulator8e-1375.5
NC_018721:3155579:3154092315409231555821491Psychroflexus torquis ATCC 700755 chromosome, complete genomeATP binding protein with AAA and HATPase domains1e-1274.7
NC_010645:406794:4125234125234140011479Bordetella avium 197N, complete genomehypothetical protein2e-1273.9
NC_008942:875060:876192876192877022831Methanocorpusculum labreanum Z, complete genomehypothetical protein5e-1272.8
NC_015571:801715:8150688150688165191452Porphyromonas gingivalis TDC60, complete genomehypothetical protein3e-1170.5
NC_015160:2239933:2258321225832122597691449Odoribacter splanchnicus DSM 20712 chromosome, complete genomeputative transcriptional regulator3e-1170.5
NC_002950:1571383:1604022160402216054611440Porphyromonas gingivalis W83, complete genomehypothetical protein2e-1170.5
NC_006461:953817:9646959646959660501356Thermus thermophilus HB8, complete genomehypothetical protein2e-1170.5
NC_007404:2743877:2756352275635227582561905Thiobacillus denitrificans ATCC 25259, complete genomePredicted transcriptional regulator2e-1170.5
NC_015061:3111211:3124019312401931254101392Rahnella sp. Y9602 chromosome, complete genometranscriptional regulator2e-1170.5
NC_017047:3174588:3188621318862131900121392Rahnella aquatilis HX2 chromosome, complete genometranscriptional regulator2e-1170.5
NC_019902:1863162:1868352186835218698451494Thioalkalivibrio nitratireducens DSM 14787, complete genomeATP-dependent DNA helicase3e-1170.1
NC_009615:3308538:3315480331548033169401461Parabacteroides distasonis ATCC 8503 chromosome, complete genomeATP-dependent DNA helicase1e-1068.2
NC_015873:450593:4561264561264575801455Megasphaera elsdenii DSM 20460, complete genomepredicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen2e-1067.8
NC_002163:1471517:1485626148562614870921467Campylobacter jejuni subsp. jejuni NCTC 11168, complete genomehypothetical protein2e-1067.8
NC_007413:1405817:1415938141593814180012064Anabaena variabilis ATCC 29413, complete genomePredicted transcriptional regulator3e-1067
NC_016043:1563505:1567437156743715688881452Taylorella asinigenitalis MCE3 chromosome, complete genomeATP-dependent DNA helicase recG3e-1067
NC_020304:2008740:200874020087402009627888Desulfocapsa sulfexigens DSM 10523, complete genomehypothetical protein3e-1067
NC_010688:605018:6154626154626167781317Xanthomonas campestris pv. campestris, complete genomeputative DNA-binding protein3e-1067
NC_007086:626891:6373356373356386511317Xanthomonas campestris pv. campestris str. 8004, complete genomeATP-dependent DNA helicase3e-1067
NC_003902:624828:6352726352726365881317Xanthomonas campestris pv. campestris str. ATCC 33913, completeATP-dependent DNA helicase3e-1067
NC_013204:74855:7749777497789001404Eggerthella lenta DSM 2243, complete genomeputative transcriptional regulator3e-1066.6
NC_019902:1863162:1870066187006618713071242Thioalkalivibrio nitratireducens DSM 14787, complete genomeATP-dependent DNA helicase-like protein7e-1065.9
NC_013740:571879:5834425834425846981257Acidaminococcus fermentans DSM 20731, complete genomeputative transcriptional regulator7e-1065.9
NC_018721:943801:9589309589309605731644Psychroflexus torquis ATCC 700755 chromosome, complete genometranscriptional regulator with an ATP-binding domain8e-1065.5
NC_017218:178564:194295194295195176882Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomehypothetical protein9e-1065.5
NC_015501:1941851:1956323195632319577621440Porphyromonas asaccharolytica DSM 20707 chromosome, completeputative transcriptional regulator9e-1065.5
NC_008702:1:7453745389101458Azoarcus sp. BH72, complete genomeputative restriction modification gene1e-0965.5
NC_015164:29004:3483234832362081377Bacteroides salanitronis DSM 18170 chromosome, complete genomeputative transcriptional regulator1e-0965.1
NC_009943:272158:2846282846282857791152Candidatus Desulfococcus oleovorans Hxd3, complete genomeputative transcriptional regulator2e-0964.7
NC_007575:973559:9873209873209886601341Sulfurimonas denitrificans DSM 1251, complete genomeputative transcriptional regulator2e-0964.7
NC_019977:1353332:1362774136277413641291356Methanomethylovorans hollandica DSM 15978, complete genomeputative transcriptional regulator with HTH domain2e-0964.7
NC_007404:1126756:1136104113610411374501347Thiobacillus denitrificans ATCC 25259, complete genomePredicted transcriptional regulator2e-0964.3
NC_014562:2871765:2881811288181128832171407Pantoea vagans C9-1 chromosome, complete genomehypothetical protein2e-0963.9
NC_009092:1305355:1317630131763013190181389Shewanella loihica PV-4, complete genomeputative transcriptional regulator2e-0963.9
NC_016745:1257397:1267614126761412690021389Oceanimonas sp. GK1 chromosome, complete genomeputative transcriptional regulator3e-0963.5
NC_012489:209016:2123302123302143271998Gemmatimonas aurantiaca T-27, complete genomehypothetical protein3e-0963.5
NC_009655:866281:8716948716948729051212Actinobacillus succinogenes 130Z chromosome, complete genomeputative transcriptional regulator6e-0962.8
NC_014033:164670:1778321778321793941563Prevotella ruminicola 23 chromosome, complete genomedivergent AAA domain-containing protein6e-0962.8
NC_005773:106000:1204131204131218821470Pseudomonas syringae pv. phaseolicola 1448A, complete genomecarbon storage regulator related protein7e-0962.4
NC_013851:3142182:3154890315489031561341245Allochromatium vinosum DSM 180 chromosome, complete genomeputative transcriptional regulator8e-0962.4
NC_007005:5825925:584072758407275841323597Pseudomonas syringae pv. syringae B728a, complete genomeATP-dependent DNA helicase recG1e-0861.6
NC_011593:53044:5692856928585771650Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,transcriptional regulator2e-0861.2
NC_016610:726128:7499917499917511121122Tannerella forsythia ATCC 43037 chromosome, complete genome2e-0861.2
NC_017187:10320:2958029580310401461Arcobacter butzleri ED-1, complete genomehypothetical protein2e-0860.8
NC_017219:51563:5671356713583681656Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeputative transcriptional regulator2e-0860.8
NC_017218:31247:4576845768474231656Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomedivergent AAA domain-containing protein2e-0860.8
NC_015067:32500:3834238342399911650Bifidobacterium longum subsp. longum JCM 1217, complete genometranscriptional regulator2e-0860.8
NC_008782:2683989:2689533268953326907081176Acidovorax sp. JS42, complete genomeputative transcriptional regulator2e-0860.5
NC_016626:1751159:1770488177048817719511464Burkholderia sp. YI23 plasmid byi_1p, complete sequencehypothetical protein5e-0859.7
NC_009254:74000:824418244183328888Burkholderia vietnamiensis G4 chromosome 3, complete sequencetranscriptional regulator4e-0859.7
NC_008639:1462000:1476041147604114805194479Chlorobium phaeobacteroides DSM 266, complete genomeprotein of unknown function DUF3236e-0859.3
NC_007514:904565:9303709303709315271158Chlorobium chlorochromatii CaD3, complete genomeputative transcriptional regulator6e-0859.3
NC_007514:904565:936305936305937204900Chlorobium chlorochromatii CaD3, complete genomeputative transcriptional regulator7e-0859.3
NC_013440:971717:9821389821389835891452Haliangium ochraceum DSM 14365, complete genomeputative transcriptional regulator2e-0757.8
NC_014914:1327245:134263113426311343533903Taylorella equigenitalis MCE9 chromosome, complete genomehypothetical protein2e-0757.8
NC_013722:1816561:1850985185098518521601176Xanthomonas albilineans, complete genomeputative atp-dependent dna helicase protein2e-0757.4
NC_015311:403281:4259074259074273641458Prevotella denticola F0289 chromosome, complete genomedivergent AAA domain-containing protein3e-0757
NC_017216:22454:216872168722529843Bifidobacterium animalis subsp. lactis BLC1, complete genomeputative transcriptional regulator4e-0756.6
NC_017215:22616:218492184922691843Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,Hydrolase acting on acid anhydrides in phosphorous-containing anhydrides4e-0756.6
NC_010842:2310756:2310756231075623121681413Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosometranscriptional regulator5e-0756.2
NC_010602:2244729:2305370230537023067821413Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'putative ATP-binding protein5e-0756.2
NC_013853:2048867:2065691206569120671571467Streptococcus mitis B6, complete genometranscriptional regulator6e-0755.8
NC_007514:1475323:1488373148837314895811209Chlorobium chlorochromatii CaD3, complete genomeputative transcriptional regulator8e-0755.5
NC_014638:183115:1982581982581998801623Bifidobacterium bifidum PRL2010 chromosome, complete genomeDNA-binding protein1e-0655.1
NC_013194:963735:9637359637359651151381Candidatus Accumulibacter phosphatis clade IIA str. UW-1, complete1e-0655.1
NC_015577:1794560:1822146182214618233241179Treponema azotonutricium ZAS-9 chromosome, complete genomeATP-dependent DNA helicase1e-0654.7
NC_015578:1940097:1962951196295119640271077Treponema primitia ZAS-2 chromosome, complete genome2e-0654.7
NC_015500:2866027:2890651289065128923151665Treponema brennaborense DSM 12168 chromosome, complete genomeputative transcriptional regulator3e-0653.9
NC_018691:3437821:3445765344576534473001536Alcanivorax dieselolei B5 chromosome, complete genomehypothetical protein4e-0653.1
NC_008570:4009762:4018374401837440202031830Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeATP-dependent DNA helicase RecG5e-0652.8