Pre_GI: BLASTP Hits

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Query: NC_009513:870837:875993 Lactobacillus reuteri F275, complete genome

Start: 875993, End: 876922, Length: 930

Host Lineage: Lactobacillus reuteri; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain (JCM 1112, F275) is the type strain for the species. It is a human isolate, which is unable to colonize the intestinal tract of mice. Normal gut bacterium. They are commonly found in the oral, vaginal, and intestinal tracts of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained. These cultures produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also used as a starter molecule for complex organic molecule syntheses. Lactobacillus reuteri is a member of the normal microbial community of the gut in humans and animals. This organism produces antibiotic compounds, such as reutericin and reuterin, which have inhibitory effects on pathogenic microorganisms.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010609:880196:885352885352886281930Lactobacillus reuteri JCM 1112, complete genomehypothetical protein0637
NC_009513:1184000:119456111945611195550990Lactobacillus reuteri F275, complete genomeRecT protein1e-99362
NC_010610:755000:7667607667607677881029Lactobacillus fermentum IFO 3956, complete genomehypothetical protein4e-83308
NC_016052:842762:848325848325849290966Tetragenococcus halophilus NBRC 12172, complete genomeputative RecT protein4e-72271
NC_015428:1483768:150039815003981501345948Lactobacillus buchneri NRRL B-30929 chromosome, complete genomeRecT protein9e-71266
NC_014554:2159782:217425821742582175157900Lactobacillus plantarum subsp. plantarum ST-III chromosome,recombination protein RecT7e-65247
NC_013199:845000:850121850121850996876Lactobacillus rhamnosus Lc 705, complete genomeprophage protein9e-61233
NC_013198:1095591:111129111112911112166876Lactobacillus rhamnosus GG, complete genomeRecT protein2e-60232
NC_015558:1425271:144215114421511443086936Streptococcus parauberis KCTC 11537 chromosome, complete genomehypothetical protein1e-56220
NC_021182:2536000:254221125422112543161951Clostridium pasteurianum BC1, complete genomerecombinational DNA repair protein (RecE pathway)3e-56219
NC_009617:1897887:190585519058551906775921Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeRecT protein5e-49194
NC_009487:362475:369884369884370804921Staphylococcus aureus subsp. aureus JH9 chromosome, completeRecT protein4e-43175
NC_009632:361229:369954369954370874921Staphylococcus aureus subsp. aureus JH1 chromosome, completeRecT protein4e-43175
NC_009487:2148316:216030921603092161229921Staphylococcus aureus subsp. aureus JH9 chromosome, completeRecT protein4e-43175
NC_009632:2148767:216018321601832161103921Staphylococcus aureus subsp. aureus JH1 chromosome, completeRecT protein4e-43175
NC_002758:2101137:211521621152162116136921Staphylococcus aureus subsp. aureus Mu50, complete genomehypothetical protein3e-38159
NC_010079:2102856:211736821173682118288921Staphylococcus aureus subsp. aureus USA300_TCH1516, completepossible recombination protein RecT3e-38159
NC_017338:2034698:206934620693462070266921Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeputative phage-related DNA recombination protein3e-38159
NC_017351:2074000:210307321030732103993921Staphylococcus aureus subsp. aureus 11819-97 chromosome, completerecombinase, phage RecT family protein3e-38159
NC_017351:643674:651432651432652352921Staphylococcus aureus subsp. aureus 11819-97 chromosome, completerecombinase, phage RecT family protein3e-38159
NC_017341:2127815:214754621475462148466921Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,putative phage-related DNA recombination protein6e-38157
NC_008571:2582674:259642225964222597363942Gramella forsetii KT0803, complete genomeRecT family protein7e-35147
NC_011205:1345511:135360813536081354438831Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853recombination and repair protein RecT2e-1479.7
NC_016831:1734292:175921117592111760041831Salmonella enterica subsp. enterica serovar Gallinarum/pullorumphage recombination protein5e-1478.6
NC_002655:2142587:216290221629022163711810Escherichia coli O157:H7 EDL933, complete genomerecombinase, DNA renaturation protein encoded by prophage CP-933R3e-1375.9
NC_006270:1415001:143041114304111431232822Bacillus licheniformis ATCC 14580, complete genomeDNA binding, phage related protein1e-1274.3
NC_006322:1415863:143127414312741432095822Bacillus licheniformis ATCC 14580, complete genomeYqaK1e-1274.3
CP002185:1493280:150252315025231503332810Escherichia coli W, complete genomeRac prophage; recombination and repair protein1e-1273.9
NC_010473:1493983:150140415014041502213810Escherichia coli str. K-12 substr. DH10B, complete genomeRac prophage; recombination and repair protein1e-1273.9
CP002516:2580774:260251826025182603327810Escherichia coli KO11, complete genomeRecT protein1e-1273.9
NC_000913:1404000:141200814120081412817810Escherichia coli K12, complete genomeRac prophage; recombination and repair protein1e-1273.9
AC_000091:1407693:141569814156981416507810Escherichia coli W3110 DNA, complete genomerecombination and repair protein1e-1273.9
NC_011415:1472500:147741214774121478221810Escherichia coli SE11 chromosome, complete genomerecombination and repair protein RecT1e-1273.9
NC_012759:1296000:130406713040671304876810Escherichia coli BW2952 chromosome, complete genomerecombination and repair protein RecT1e-1273.9
NC_012947:2366000:238242123824212383230810Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completerecombination and repair protein RecT1e-1273.9
NC_012967:1403733:141115414111541411963810Escherichia coli B str. REL606 chromosome, complete genomerecombination and repair protein RecT1e-1273.9
NC_016902:2580774:260251826025182603327810Escherichia coli KO11FL chromosome, complete genomeRecT protein1e-1273.9
NC_020134:420500:426773426773427588816Clostridium stercorarium subsp. stercorarium DSM 8532, completeprotein RecT6e-1168.6
NC_014915:2963500:299691029969102997755846Geobacillus sp. Y412MC52 chromosome, complete genomeRecT protein2e-0963.2
NC_013411:597235:606180606180607025846Geobacillus sp. Y412MC61, complete genomeRecT protein2e-0963.2
NC_016935:6464201:648503064850306485929900Paenibacillus mucilaginosus 3016 chromosome, complete genomeDNA-binding phage-related protein4e-0962.4
NC_002927:2338549:234097023409702341956987Bordetella bronchiseptica RB50, complete genomephage-related DNA recombination protein2e-0860.5
NC_016935:1636278:165086616508661651765900Paenibacillus mucilaginosus 3016 chromosome, complete genomeDNA-binding phage-related protein2e-0859.7
NC_007712:1954808:1977354197735419783671014Sodalis glossinidius str. 'morsitans', complete genomephage recombinase1e-0757
NC_017208:694500:700832700832701638807Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeDNA-binding phage-related protein2e-0757
NC_009699:2733529:273431327343132735116804Clostridium botulinum F str. Langeland chromosome, complete genomerecombinase3e-0756.2
NC_009495:2685646:268643026864302687233804Clostridium botulinum A str. ATCC 3502 chromosome, complete genomerecombinase, phage RecT family3e-0755.8
NC_010002:2110953:211638421163842117307924Delftia acidovorans SPH-1, complete genomeRecT protein3e-0652.8