Pre_GI: BLASTN Hits

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Query: NC_009512:3118907 Pseudomonas putida F1, complete genome

Start: 3118907, End: 3138381, Length: 19475

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008027:33873663387366341245025085Pseudomonas entomophila L48, complete genome02123BLASTN svgBLASTP svg
NC_015410:30034173003417302693723521Pseudomonas mendocina NK-01 chromosome, complete genome01495BLASTN svgBLASTP svg
NC_015733:41300004130000414900419005Pseudomonas putida S16 chromosome, complete genome0926BLASTN svgBLASTP svg
NC_020211:1655826*1655826167870522880Serratia marcescens WW4, complete genome3e-132480BLASTN svgBLASTP svg
NC_020064:15014411501441151984318403Serratia marcescens FGI94, complete genome5e-106392BLASTN svgBLASTP svg
NC_008570:2216736*2216736227194055205Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome2e-77297BLASTN svgBLASTP svg
NC_007963:27770662777066279798320918Chromohalobacter salexigens DSM 3043, complete genome3e-73283BLASTN svgBLASTP svg
AP010958:92293792293795098628050Escherichia coli O103:H2 str. 12009 DNA, complete genome3e-58234BLASTN svgBLASTP svg
NC_009832:16642381664238169623231995Serratia proteamaculans 568, complete genome4e-57230BLASTN svgBLASTP svg
NC_015410:3502099*3502099352815926061Pseudomonas mendocina NK-01 chromosome, complete genome1e-54222BLASTN svgBLASTP svg
NC_010508:19806891980689200677326085Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence1e-35159BLASTN svgBLASTP svg
NC_013959:839928399210878124790Sideroxydans lithotrophicus ES-1 chromosome, complete genome1e-32149BLASTN svgBLASTP svg
NC_009074:21175002117500214668929190Burkholderia pseudomallei 668 chromosome I, complete sequence2e-31145BLASTN svgBLASTP svg
NC_015733:21946762194676221628521610Pseudomonas putida S16 chromosome, complete genome1e-29139BLASTN svgBLASTP svg
NC_008027:2621443*2621443264643624994Pseudomonas entomophila L48, complete genome2e-28135BLASTN svgBLASTP svg
NC_005773:69499069499072559930610Pseudomonas syringae pv. phaseolicola 1448A, complete genome2e-28135BLASTN svgBLASTP svg
NC_007778:28759732875973289899723025Rhodopseudomonas palustris HaA2, complete genome2e-25125BLASTN svgBLASTP svg
NC_010501:30131033013103303609922997Pseudomonas putida W619, complete genome3e-24121BLASTN svgBLASTP svg
NC_004129:43333024333302435159918298Pseudomonas fluorescens Pf-5, complete genome1e-20109BLASTN svgBLASTP svg
NC_005773:20800020800023117523176Pseudomonas syringae pv. phaseolicola 1448A, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_012660:1737423*1737423176616428742Pseudomonas fluorescens SBW25 chromosome, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_008027:4280000*4280000430482424825Pseudomonas entomophila L48, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_009512:755658*75565878272327066Pseudomonas putida F1, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_015733:42539614253961427610922149Pseudomonas putida S16 chromosome, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_008758:143907*14390718499941093Polaromonas naphthalenivorans CJ2 plasmid pPNAP02, complete6e-1383.8BLASTN svgBLASTP svg
NC_010501:4989455*4989455501446425010Pseudomonas putida W619, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_008027:38443553844355388629641942Pseudomonas entomophila L48, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_003143:16910001691000171055719558Yersinia pestis CO92, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_004088:29370772937077296291925843Yersinia pestis KIM, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_005810:15200001520000154409924100Yersinia pestis biovar Microtus str. 91001, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_006155:18079021807902182857520674Yersinia pseudotuberculosis IP 32953, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_008027:77589677589680259926704Pseudomonas entomophila L48, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_008149:27731392773139279513521997Yersinia pestis Nepal516, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_008150:90500090500092909924100Yersinia pestis Antiqua, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_008463:2654014*2654014267605522042Pseudomonas aeruginosa UCBPP-PA14, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010465:28205002820500286978249283Yersinia pseudotuberculosis YPIII, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010634:18095001809500182909919600Yersinia pseudotuberculosis PB1/+, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_004129:2328491*2328491236123032740Pseudomonas fluorescens Pf-5, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_007510:28051212805121282621621096Burkholderia sp. 383 chromosome 1, complete sequence4e-1177.8BLASTN svgBLASTP svg
NC_010551:25378762537876256370525830Burkholderia ambifaria MC40-6 chromosome 1, complete sequence4e-1177.8BLASTN svgBLASTP svg
NC_015581:771482*77148280463933158Thioalkalimicrobium cyclicum ALM1 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_013716:37084153708415373077822364Citrobacter rodentium ICC168, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015733:5955467*5955467598799932533Pseudomonas putida S16 chromosome, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_010501:4379920*4379920440315523236Pseudomonas putida W619, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_008027:4953432*4953432497941825987Pseudomonas entomophila L48, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_008027:3953951*3953951397851024560Pseudomonas entomophila L48, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_008027:2051821*2051821207333821518Pseudomonas entomophila L48, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_008390:26436532643653267440130749Burkholderia cepacia AMMD chromosome 1, complete sequence9e-0969.9BLASTN svgBLASTP svg
NC_009512:15181131518113155588037768Pseudomonas putida F1, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_010622:23859322385932240909923168Burkholderia phymatum STM815 chromosome 1, complete sequence9e-0969.9BLASTN svgBLASTP svg
NC_020260:32770073277007330315226146Cronobacter sakazakii Sp291, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015733:35958823595882362033824457Pseudomonas putida S16 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015224:17031301703130172897125842Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,4e-0867.9BLASTN svgBLASTP svg
NC_005773:48992524899252493544536194Pseudomonas syringae pv. phaseolicola 1448A, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_002939:17383317383319586722035Geobacter sulfurreducens PCA, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_010501:25118872511887254627834392Pseudomonas putida W619, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_010804:25186952518695254148822794Burkholderia multivorans ATCC 17616 chromosome 1, complete6e-0763.9BLASTN svgBLASTP svg
NC_015711:7601733*7601733762447622744Myxococcus fulvus HW-1 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_015733:1793399*1793399181802124623Pseudomonas putida S16 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_004578:51921105192110522245930350Pseudomonas syringae pv. tomato str. DC3000, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_008027:55333115533311555523921929Pseudomonas entomophila L48, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_010571:33224673322467334823125765Opitutus terrae PB90-1, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_019673:7951493*7951493797009918607Saccharothrix espanaensis DSM 44229 complete genome2e-0661.9BLASTN svgBLASTP svg
NC_019940:28348502834850285310318254Thioflavicoccus mobilis 8321 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_010501:73436373436376909934737Pseudomonas putida W619, complete genome9e-0660BLASTN svgBLASTP svg
NC_008609:39211133921113395241031298Pelobacter propionicus DSM 2379, complete genome9e-0660BLASTN svgBLASTP svg
NC_007498:3085511*3085511310809922589Pelobacter carbinolicus DSM 2380, complete genome9e-0660BLASTN svgBLASTP svg