Pre_GI: BLASTP Hits

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Query: NC_009512:5920960:5949511 Pseudomonas putida F1, complete genome

Start: 5949511, End: 5950380, Length: 870

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017986:2687588:271842527184252719294870Pseudomonas putida ND6 chromosome, complete genomeF0F1 ATP synthase subunit A1e-154545
NC_002947:6152500:618056761805676181436870Pseudomonas putida KT2440, complete genomeATP synthase subunit A2e-154545
NC_010322:6037566:606886160688616069730870Pseudomonas putida GB-1 chromosome, complete genomeF0F1 ATP synthase subunit A3e-154544
NC_015733:5955467:598349459834945984363870Pseudomonas putida S16 chromosome, complete genomeF0F1 ATP synthase subunit A3e-154544
NC_010501:5735656:576401157640115764880870Pseudomonas putida W619, complete genomeATP synthase F0, A subunit3e-154544
NC_007492:6372900:642824164282416429110870Pseudomonas fluorescens PfO-1, complete genomeH+-transporting two-sector ATPase, A subunit8e-144509
NC_007005:6056765:608293960829396083808870Pseudomonas syringae pv. syringae B728a, complete genomeATP synthase subunit A3e-142504
NC_005966:159232:179044179044179919876Acinetobacter sp. ADP1, complete genomeATP synthase subunit A4e-93341
NC_015572:4916430:494893749489374949701765Methylomonas methanica MC09 chromosome, complete genomeATP synthase subunit a2e-68258
NC_007520:2391675:239263523926352393447813Thiomicrospira crunogena XCL-2, complete genomeATP synthase F0, A subunit1e-67256
NC_004337:3590323:392850439285043929319816Shigella flexneri 2a str. 301, complete genomeATP synthase subunit A7e-66250
NC_016632:1:11780780Serratia symbiotica str. 'Cinara cedri' chromosome, completeATP synthase subunit A1e-65249
NC_004344:1:223022303066837Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,ATP synthase subunit A2e-58226
NC_004344:672550:223022303066837Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,ATP synthase subunit A2e-58226
NC_002488:1099975:110682611068261107623798Xylella fastidiosa 9a5c, complete genomeATP synthase subunit A3e-57222
NC_007292:1:260826083426819Candidatus Blochmannia pennsylvanicus str. BPEN, complete genomeATP synthase subunit A3e-57222
NC_010513:542312:545400545400546197798Xylella fastidiosa M12 chromosome, complete genomeF0F1 ATP synthase subunit A3e-57221
NC_010577:530917:534004534004534801798Xylella fastidiosa M23, complete genomeATP synthase F0, A subunit5e-57221
NC_004556:531000:534151534151534948798Xylella fastidiosa Temecula1, complete genomeATP synthase subunit A5e-57221
NC_004757:230541:235919235919236728810Nitrosomonas europaea ATCC 19718, complete genomeATP synthase subunit A3e-55215
NC_014733:2851984:285283028528302853633804Methylovorus sp. MP688 chromosome, complete genomeATP synthase f0, a subunit6e-55214
NC_008601:1733940:176543017654301766221792Francisella tularensis subsp. novicida U112, complete genomeATP synthase, F0 sector, subunit a7e-54211
NC_010336:996661:103220010322001032991792Francisella philomiragia subsp. philomiragia ATCC 25017, completeATP synthase, F0 sector, subunit A6e-54211
NC_015696:517941:553649553649554440792Francisella sp. TX077308 chromosome, complete genomeATP synthase subunit A9e-54210
NC_016937:24654:601296012960920792Francisella tularensis subsp. tularensis TI0902 chromosome,ATP synthase subunit A2e-53209
NC_016933:24654:601296012960920792Francisella tularensis TIGB03 chromosome, complete genomeATP synthase subunit A2e-53209
NC_006570:24636:601116011160902792Francisella tularensis subsp. tularensis Schu 4, complete genomeATP synthase subunit A2e-53209
NC_008245:24652:601276012760918792Francisella tularensis subsp. tularensis FSC 198, complete genomeATP synthase A chain2e-53209
NC_010677:96470:131960131960132751792Francisella tularensis subsp. mediasiatica FSC147, complete genomeATP synthase, F0 sector, subunit a4e-53208
NC_009257:109528:145012145012145803792Francisella tularensis subsp. tularensis WY96-3418 chromosome,F0F1 ATP synthase subunit A8e-53207
NC_015222:386000:391552391552392361810Nitrosomonas sp. AL212 chromosome, complete genomeATP synthase F0, A subunit6e-53207
NC_007880:1703346:173393117339311734722792Francisella tularensis subsp. holarctica, complete genomeATP synthase A chain2e-52206
NC_008369:1702885:173356117335611734352792Francisella tularensis subsp. holarctica OSU18, complete genomeH(+)-transporting two-sector ATPase2e-52206
NC_009749:1699152:172982817298281730619792Francisella tularensis subsp. holarctica FTA, complete genomeATP synthase F0, A subunit3e-52205
NC_019815:679592:683536683536684417882Candidatus Kinetoplastibacterium crithidii (ex Angomonas deaneiF0F1 ATP synthase subunit A2e-42172
NC_017200:5149528:516135851613585162077720Bacillus thuringiensis serovar finitimus YBT-020 chromosome,F0F1 ATP synthase subunit A6e-1684.7
NC_007530:5033095:504362550436255044344720Bacillus anthracis str. 'Ames Ancestor', complete genomeATP synthase subunit A3e-1582.4
NC_005957:5037499:504832550483255049044720Bacillus thuringiensis serovar konkukian str. 97-27, completeATP synthase subunit A3e-1582.4
NC_008600:5046000:507234650723465073065720Bacillus thuringiensis str. Al Hakam, complete genomeATP synthase F0, subunit A3e-1582.4
NC_003997:5032969:504349950434995044218720Bacillus anthracis str. Ames, complete genomeATP synthase subunit A3e-1582.4
NC_011773:5091609:510330951033095104028720Bacillus cereus AH820 chromosome, complete genomeF0F1 ATP synthase subunit A3e-1582.4
NC_012659:5031827:504352550435255044244720Bacillus anthracis str. A0248, complete genomeF0F1 ATP synthase subunit A3e-1582.4
NC_016779:5009320:503699050369905037709720Bacillus cereus F837/76 chromosome, complete genomeATP synthase subunit A3e-1582.4
NC_004722:5194000:522192452219245222643720Bacillus cereus ATCC 14579, complete genomeATP synthase subunit A7e-1581.3
NC_011725:5201995:522990252299025230621720Bacillus cereus B4264 chromosome, complete genomeATP synthase F0F1 subunit A7e-1581.3
NC_014171:5107956:513378151337815134500720Bacillus thuringiensis BMB171 chromosome, complete genomeF0F1 ATP synthase subunit A7e-1581.3
NC_019903:3537545:354148135414813542218738Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,F0F1-type ATP synthase subunit alpha9e-1580.9
NC_011969:4993386:502143250214325022151720Bacillus cereus Q1 chromosome, complete genomeF0F1 ATP synthase subunit a9e-1580.9
NC_011772:5158680:518386551838655184584720Bacillus cereus G9842, complete genomeATP synthase F0, A subunit9e-1580.9
NC_003909:4996783:502219150221915022910720Bacillus cereus ATCC 10987, complete genomeATP synthase subunit A9e-1580.9
NC_007798:301456:323162323162323893732Neorickettsia sennetsu str. Miyayama, complete genomeATP synthase F0, A subunit1e-1480.5
NC_002745:2152000:216097321609732161701729Staphylococcus aureus subsp. aureus N315, complete genomeATP synthase subunit A2e-1480.1
NC_007793:2217872:222631522263152227043729Staphylococcus aureus subsp. aureus USA300, complete genomeATP synthase F0, A subunit2e-1480.1
NC_002951:2153571:216251321625132163241729Staphylococcus aureus subsp. aureus COL, complete genomeATP synthase subunit A2e-1480.1
NC_002953:2157781:216672121667212167449729Staphylococcus aureus subsp. aureus MSSA476, complete genomeATP synthase subunit A2e-1480.1
NC_002952:2256000:226533322653332266061729Staphylococcus aureus subsp. aureus MRSA252, complete genomeATP synthase subunit A2e-1480.1
NC_010079:2217767:222670922267092227437729Staphylococcus aureus subsp. aureus USA300_TCH1516, completeF-ATPase superfamily proton( H+)- or sodium (Na+)-translocating F-type ATPase subunit A2e-1480.1
NC_007622:2117188:212511921251192125847729Staphylococcus aureus RF122, complete genomeATP synthase A chain2e-1480.1
NC_002758:2227874:223740522374052238133729Staphylococcus aureus subsp. aureus Mu50, complete genomeATP synthase subunit A2e-1480.1
NC_004193:3078730:309075130907513091473723Oceanobacillus iheyensis HTE831, complete genomeATP synthase subunit A2e-1480.1
NC_009782:2230000:223904322390432239771729Staphylococcus aureus subsp. aureus Mu3, complete genomeATP synthase A chain2e-1480.1
NC_007795:2163706:217323721732372173965729Staphylococcus aureus subsp. aureus NCTC 8325, complete genomeATP synthase F0, A subunit2e-1480.1
NC_003923:2178000:218761621876162188344729Staphylococcus aureus subsp. aureus MW2, complete genomeATP synthase subunit A2e-1480.1
NC_017351:2199644:220920622092062209934729Staphylococcus aureus subsp. aureus 11819-97 chromosome, completeATP synthase F0 subunit A2e-1480.1
NC_017342:1147517:115520611552061155934729Staphylococcus aureus subsp. aureus TCH60 chromosome, completeATP synthase F0 subunit A2e-1480.1
NC_017341:2247696:225663822566382257366729Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,ATP synthase subunit alpha, AtpA_12e-1480.1
NC_017337:2186449:219740921974092198137729Staphylococcus aureus subsp. aureus ED133 chromosome, completeATP synthase subunit A2e-1480.1
NC_016928:2121919:213073421307342131462729Staphylococcus aureus subsp. aureus M013 chromosome, completeATP synthase subunit A2e-1480.1
NC_016912:2035589:204453120445312045259729Staphylococcus aureus subsp. aureus VC40 chromosome, completeF0F1 ATP synthase subunit A2e-1480.1
NC_009641:2221891:223089622308962231624729Staphylococcus aureus subsp. aureus str. Newman chromosome,F0F1 ATP synthase subunit A2e-1480.1
NC_009632:2257764:226729522672952268023729Staphylococcus aureus subsp. aureus JH1 chromosome, completeF0F1 ATP synthase subunit A2e-1480.1
NC_009487:2257889:226742022674202268148729Staphylococcus aureus subsp. aureus JH9 chromosome, completeF0F1 ATP synthase subunit A2e-1480.1
NC_011883:2680380:271397227139722714676705Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,ATP synthase F0, A subunit2e-1376.3
NC_019908:21970:308053080531713909Brachyspira pilosicoli P43/6/78 chromosome, complete genomeF0 ATP synthase subunit A2e-1273.6
NC_018607:805966:811507811507812415909Brachyspira pilosicoli B2904 chromosome, complete genomeF0 ATP synthase subunit A2e-1273.6
NC_009633:365325:384556384556385254699Alkaliphilus metalliredigens QYMF chromosome, complete genomeATP synthase F0 subunit A3e-1272.8
NC_002939:360462:364879364879365568690Geobacter sulfurreducens PCA, complete genomeATP synthase F0, A subunit2e-1170.1
NC_010407:2038499:204428620442862044966681Clavibacter michiganensis subsp. sepedonicus chromosome, completeF0F1 ATP synthase subunit A5e-1168.6
NC_009922:2766397:276780327678032768498696Alkaliphilus oremlandii OhILAs, complete genomeATP synthase F0, A subunit9e-1167.8
NC_008528:610070:623740623740624465726Oenococcus oeni PSU-1, complete genomeF0F1-type ATP synthase, subunit a2e-1067
NC_017243:2813733:282827428282742829185912Brachyspira intermedia PWS/A chromosome, complete genomeF0F1-type ATP synthase, subunit A3e-1065.9
NC_009483:4885914:490934549093454910034690Geobacter uraniireducens Rf4 chromosome, complete genomeATP synthase F0 subunit A5e-1065.5
NC_021177:5697210:571010957101095710942834Streptomyces fulvissimus DSM 40593, complete genomeF0F1 ATP synthase subunit A5e-1065.1
NC_012225:2474042:248616524861652487076912Brachyspira hyodysenteriae WA1, complete genomeputative F0F1-type ATP synthase, subunit A7e-1064.7
NC_016641:1006662:101230310123031013127825Paenibacillus terrae HPL-003 chromosome, complete genomeATP synthase subunit A8e-1064.3
NC_003454:983681:993847993847994503657Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeATP synthase A chain, sodium ion specific2e-0860.1
NC_014654:454633:456723456723457382660Halanaerobium sp. 'sapolanicus' chromosome, complete genomeATP synthase F0, A subunit3e-0859.3
NC_010723:485874:488302488302488982681Clostridium botulinum E3 str. Alaska E43, complete genomeATP synthase F0, A subunit6e-0858.2
NC_021182:4427468:444916444491644449838675Clostridium pasteurianum BC1, complete genomeF0F1-type ATP synthase, alpha subunit1e-0757.8
NC_018664:201487:204718204718205413696Clostridium acidurici 9a chromosome, complete genomeF-ATPase, F0 complex, subunit A AtpB2e-0757
NC_014664:1669642:169047716904771691298822Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomeATP synthase F0, A subunit2e-0756.6
NC_010794:800951:803131803131803772642Methylacidiphilum infernorum V4, complete genomeF0F1 ATP synthase subunit A3e-0756.2
NC_011726:2793669:280506328050632805818756Cyanothece sp. PCC 8801, complete genomeATP synthase F0, A subunit2e-0756.2
NC_013161:3448966:345563934556393456394756Cyanothece sp. PCC 8802, complete genomeATP synthase F0, A subunit2e-0756.2
NC_013093:7174636:719325471932547194105852Actinosynnema mirum DSM 43827, complete genomeATP synthase F0, A subunit3e-0755.8
NC_010003:795355:803689803689804507819Petrotoga mobilis SJ95, complete genomeATP synthase F0, A subunit3e-0755.8
NC_012489:2913920:291708729170872918073987Gemmatimonas aurantiaca T-27, complete genomeATP synthase subunit a5e-0755.1
NC_019673:8114376:813221081322108132989780Saccharothrix espanaensis DSM 44229 complete genomeATP synthase F0 subcomplex A subunit6e-0755.1
NC_011593:333488:354607354607355419813Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,F0F1 ATP synthase subunit A8e-0754.7
NC_017219:333279:354398354398355210813Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeATP synthase subunit A8e-0754.7
NC_008618:1804610:180803218080321808841810Bifidobacterium adolescentis ATCC 15703, complete genomeATP synthase A chain7e-0754.7
NC_012815:1682872:168315416831541683966813Bifidobacterium animalis subsp. lactis DSM 10140, complete genomeF0F1 ATP synthase subunit A2e-0653.5
NC_012814:1682500:168343716834371684249813Bifidobacterium animalis subsp. lactis Bl-04, complete genomeF0F1 ATP synthase subunit A2e-0653.5
NC_011835:813345:814208814208815020813Bifidobacterium animalis subsp. lactis AD011 chromosome, completeATP synthase subunit A2e-0653.5
NC_017214:379728:380591380591381403813Bifidobacterium animalis subsp. lactis BB-12 chromosome, completeATP synthase subunit A2e-0653.5
NC_017215:1687161:168802416880241688836813Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,H(+)-transporting two-sector ATPase2e-0653.5
NC_017216:1682219:168308216830821683894813Bifidobacterium animalis subsp. lactis BLC1, complete genomeF0F1 ATP synthase subunit A2e-0653.5
NC_017217:1688441:168872316887231689535813Bifidobacterium animalis subsp. lactis V9 chromosome, completeF0F1 ATP synthase subunit A2e-0653.5
NC_013715:1445959:145329614532961454150855Rothia mucilaginosa DY-18, complete genomeF0F1-type ATP synthase, subunit a3e-0652.4
NC_018720:1878201:188418418841841884999816Bifidobacterium asteroides PRL2011 chromosome, complete genomeATP synthase F0, A subunit4e-0652.4
NC_014972:1407632:143094914309491431644696Desulfobulbus propionicus DSM 2032 chromosome, complete genomeATP synthase F0 subcomplex subunit A4e-0652.4
NC_014644:1:750275028362861Gardnerella vaginalis ATCC 14019 chromosome, complete genomeATP synthase F0 subunit A5e-0652
NC_008319:2007752:203082820308282031553726Synechococcus sp. CC9311, complete genomeATP synthase F0, A subunit6e-0651.6