Pre_GI: BLASTP Hits

Some Help

Query: NC_009512:5632591:5684850 Pseudomonas putida F1, complete genome

Start: 5684850, End: 5685524, Length: 675

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011901:2914000:291412429141242914780657Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeribose 5-phosphate isomerase2e-76285
NC_005085:1269787:132424713242471324906660Chromobacterium violaceum ATCC 12472, complete genomeribose-5-phosphate isomerase A9e-75279
NC_015224:889536:901742901742902404663Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,ribose-5-phosphate isomerase A3e-74277
NC_013416:1429881:143270314327031433359657Aggregatibacter actinomycetemcomitans D11S-1, complete genomeribose 5-phosphate isomerase A2e-67255
NC_018697:2055725:205615720561572056813657Cycloclasticus sp. P1 chromosome, complete genomeRibose 5-phosphate isomerase A3e-67254
NC_014323:3976351:397635139763513977022672Herbaspirillum seropedicae SmR1 chromosome, complete genomeribose 5-phosphate isomerase9e-66249
NC_008819:1531187:155252815525281553238711Prochlorococcus marinus str. NATL1A, complete genomeRibose 5-phosphate isomerase8e-38156
NC_007335:944175:965516965516966226711Prochlorococcus marinus str. NATL2A, complete genomeribose 5-phosphate isomerase2e-37155
NC_015690:6595395:659863665986366599325690Paenibacillus mucilaginosus KNP414 chromosome, complete genomeribose 5-phosphate isomerase6e-35147
NC_014122:606000:615570615570616235666Methanocaldococcus infernus ME chromosome, complete genomeribose 5-phosphate isomerase1e-34145
NC_009634:547995:552342552342553061720Methanococcus vannielii SB chromosome, complete genomeribose-5-phosphate isomerase A5e-33140
NC_009975:1374500:139027313902731390992720Methanococcus maripaludis C6, complete genomeribose 5-phosphate isomerase6e-33140
NC_013407:146000:168949168949169629681Methanocaldococcus vulcanius M7, complete genomeribose 5-phosphate isomerase2e-32139
NC_008149:3022970:303150430315043032214711Yersinia pestis Nepal516, complete genomeribose 5-phosphate isomerase1e-32139
NC_003143:1441211:145151714515171452227711Yersinia pestis CO92, complete genomeputative ribose 5-phosphate isomerase1e-32139
NC_008150:1147883:115762511576251158335711Yersinia pestis Antiqua, complete genomeputative ribose 5-phosphate isomerase1e-32139
NC_006155:1567306:157764915776491578359711Yersinia pseudotuberculosis IP 32953, complete genomeputative ribose 5-phosphate isomerase1e-32139
NC_009381:2731965:274049927404992741209711Yersinia pestis Pestoides F chromosome, complete genomeribose 5-phosphate isomerase1e-32139
NC_014029:1512605:152291115229111523621711Yersinia pestis Z176003 chromosome, complete genomeputative ribose 5-phosphate isomerase1e-32139
NC_017154:1454704:146501014650101465720711Yersinia pestis D106004 chromosome, complete genomeputative ribose 5-phosphate isomerase1e-32139
NC_017160:1299733:130809113080911308801711Yersinia pestis D182038 chromosome, complete genomeputative ribose 5-phosphate isomerase1e-32139
NC_017168:4363000:437357743735774374287711Yersinia pestis A1122 chromosome, complete genomeribose 5-phosphate isomerase A1e-32139
NC_017265:2807302:281584528158452816555711Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative ribose 5-phosphate isomerase1e-32139
NC_004088:3186954:319549631954963196248753Yersinia pestis KIM, complete genomeribose 5-phosphate isomerase A1e-32139
NC_005810:1413305:142186314218631422615753Yersinia pestis biovar Microtus str. 91001, complete genomeputative ribose 5-phosphate isomerase1e-32139
NC_009637:438037:441169441169441888720Methanococcus maripaludis C7 chromosome, complete genomeribose-5-phosphate isomerase A3e-32138
NC_010465:3046904:305551430555143056224711Yersinia pseudotuberculosis YPIII, complete genomeribose 5-phosphate isomerase3e-32138
NC_010159:1558000:156840015684001569110711Yersinia pestis Angola, complete genomeribose 5-phosphate isomerase A9e-32136
NC_009135:330628:366500366500367219720Methanococcus maripaludis C5, complete genomeribose 5-phosphate isomerase1e-31136
NC_015320:1159613:116183111618311162505675Archaeoglobus veneficus SNP6 chromosome, complete genomeRibose-5-phosphate isomerase A8e-31133
NC_007577:1458657:147818114781811478894714Prochlorococcus marinus str. MIT 9312, complete genomeribose 5-phosphate isomerase2e-30132
NC_009708:3035798:304431230443123045022711Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeribose 5-phosphate isomerase A8e-30130
NC_013926:511674:530958530958531650693Aciduliprofundum boonei T469 chromosome, complete genomeribose 5-phosphate isomerase7e-30130
NC_008817:1443983:146349514634951464190696Prochlorococcus marinus str. MIT 9515, complete genomeRibose 5-phosphate isomerase1e-29129
NC_005042:1480761:150230115023011503014714Prochlorococcus marinus subsp. marinus str. CCMP1375, completeRibose 5-phosphate isomerase2e-29129
NC_009091:1392469:141201114120111412706696Prochlorococcus marinus str. MIT 9301, complete genomeRibose 5-phosphate isomerase4e-29128
NC_008816:1416711:143623514362351436930696Prochlorococcus marinus str. AS9601, complete genomeRibose 5-phosphate isomerase1e-28126
NC_015433:1315363:131725913172591317933675Streptococcus suis ST3 chromosome, complete genomeribose 5-phosphate isomerase A3e-28125
NC_005072:1405884:142605214260521426747696Prochlorococcus marinus subsp. pastoris str. CCMP1986, completeRibose 5-phosphate isomerase7e-28124
NC_009840:1485383:150558615055861506281696Prochlorococcus marinus str. MIT 9215, complete genomeRibose 5-phosphate isomerase2e-27122
NC_014923:4017575:401967240196724020403732Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeribose 5-phosphate isomerase4e-27121
NC_015602:1143038:114912311491231149815693Lactobacillus kefiranofaciens ZW3 chromosome, complete genomeribose-5-phosphate isomerase A4e-26117
NC_000917:829159:842320842320842997678Archaeoglobus fulgidus DSM 4304, complete genomeribose 5-phosphate isomerase (rpi)1e-25116
NC_017347:2437902:245663924566392457325687Staphylococcus aureus subsp. aureus T0131 chromosome, completeribose-5-phosphate isomerase A2e-25115
NC_019907:819165:822757822757823437681Liberibacter crescens BT-1 chromosome, complete genomeribose 5-phosphate isomerase A9e-23107
NC_020248:708024:715525715525716226702Chlamydophila psittaci Mat116, complete genomeribose-5-phosphate isomerase A5e-22104
NC_015470:715500:723050723050723751702Chlamydophila psittaci 6BC chromosome, complete genomeribose 5-phosphate isomerase A1e-21103
NC_017287:710104:722962722962723663702Chlamydophila psittaci 6BC chromosome, complete genomeribose 5-phosphate isomerase A1e-21103
NC_017289:716085:723586723586724287702Chlamydophila psittaci 01DC11 chromosome, complete genomeribose 5-phosphate isomerase A1e-21103
NC_017290:716092:723593723593724294702Chlamydophila psittaci 08DC60 chromosome, complete genomeribose 5-phosphate isomerase A1e-21103
NC_017291:713265:720766720766721467702Chlamydophila psittaci C19/98 chromosome, complete genomeribose 5-phosphate isomerase A1e-21103
NC_017292:716050:723551723551724252702Chlamydophila psittaci 02DC15 chromosome, complete genomeribose 5-phosphate isomerase A1e-21103
NC_012623:1405893:141158914115891412272684Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeribose 5-phosphate isomerase3e-21102
NC_017275:1189162:120057312005731201256684Sulfolobus islandicus HVE10/4 chromosome, complete genomeribose 5-phosphate isomerase3e-21102
NC_012632:1249334:126382612638261264509684Sulfolobus islandicus M.16.27 chromosome, complete genomeribose 5-phosphate isomerase3e-21102
NC_012589:1241782:125320612532061253889684Sulfolobus islandicus L.S.2.15, complete genomeribose 5-phosphate isomerase3e-21102
NC_002754:824180:837100837100837783684Sulfolobus solfataricus P2, complete genomeRibose 5-phosphate isomerase (rpiA)4e-21101
NC_017276:1051707:106496910649691065652684Sulfolobus islandicus REY15A chromosome, complete genomeribose 5-phosphate isomerase1e-20100
NC_014774:671695:691968691968692696729Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completeribose-5-phosphate isomerase A5e-2097.8
NC_016776:4115889:413236041323604133061702Bacteroides fragilis 638R, complete genomeputative ribose 5-phosphate isomerase6e-2097.4
NC_007181:1094422:110892411089241109586663Sulfolobus acidocaldarius DSM 639, complete genomeribose 5-phosphate isomerase4e-1788.2
NC_003551:1650476:166719016671901667828639Methanopyrus kandleri AV19, complete genomeRibose 5-phosphate isomerase3e-1685.1
NC_006156:685344:698675698675699361687Borrelia garinii PBi chromosome linear, complete sequenceribose 5-phosphate isomerase6e-1270.9
NC_007929:1463295:149917714991771499854678Lactobacillus salivarius subsp. salivarius UCC118, complete genomeRibose 5-phosphate isomerase3e-0652