Pre_GI: BLASTP Hits

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Query: NC_009512:5632591:5681921 Pseudomonas putida F1, complete genome

Start: 5681921, End: 5682577, Length: 657

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008789:942309:964198964198964881684Halorhodospira halophila SL1, complete genomeHAD-superfamily subfamily IB hydrolase, TIGR014905e-68257
NC_011761:684969:684969684969685661693Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeHAD-superfamily hydrolase2e-64245
NC_011206:863987:863987863987864679693Acidithiobacillus ferrooxidans ATCC 53993, complete genomeHAD-superfamily subfamily IB hydrolase, TIGR014902e-64245
NC_013960:3379515:338517133851713385836666Nitrosococcus halophilus Nc4 chromosome, complete genomeHAD-superfamily subfamily IB hydrolase, TIGR014904e-63241
NC_007951:570500:574477574477575163687Burkholderia xenovorans LB400 chromosome 1, complete sequenceHAD-superfamily subfamily IB hydrolase, hypothetical 27e-53206
NC_015677:2939301:296037829603782961055678Ramlibacter tataouinensis TTB310 chromosome, complete genomehypothetical protein5e-46184
NC_018080:4280401:430595043059504306603654Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein2e-41169
NC_008463:4389721:441518444151844415837654Pseudomonas aeruginosa UCBPP-PA14, complete genomePossible phosphoserine phosphatase6e-41167
NC_016002:2037374:207892820789282079596669Pseudogulbenkiania sp. NH8B, complete genomeHAD family hydrolase4e-39161
NC_010524:3445641:345863134586313459308678Leptothrix cholodnii SP-6, complete genomeHAD-superfamily subfamily IB hydrolase, TIGR014905e-34144
NC_018080:1730534:174928317492831749933651Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein4e-32137
NC_012731:1088321:110805311080531108718666Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomefamily IB HAD-hydrolase4e-31134
NC_011283:4438500:443862944386294439294666Klebsiella pneumoniae 342 chromosome, complete genomeHAD-superfamily hydrolase5e-31134
NC_016628:1190366:121414412141441214803660Vibrio furnissii NCTC 11218 chromosome 2, complete sequenceHAD-superfamily hydrolase8e-31133
NC_005125:3420270:342027034202703421040771Gloeobacter violaceus PCC 7421, complete genomehypothetical protein5e-22104
NC_014391:421547:436794436794437600807Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeHAD-superfamily hydrolase4e-21101
NC_016906:3286384:3305667330566733071541488Gordonia polyisoprenivorans VH2 chromosome, complete genome1-acyl-sn-glycerol-3-phosphate acyltransferase6e-21100
NC_002944:4446083:445411044541104455021912Mycobacterium avium subsp. paratuberculosis K-10, complete genomeSerB2e-2098.6
NC_006512:2789098:279357227935722794240669Idiomarina loihiensis L2TR, complete genomeProbable phosphoserine phosphatase, HAD-superfamily hydrolase1e-1996.3
NC_015061:2770856:279106027910602791773714Rahnella sp. Y9602 chromosome, complete genomeHAD-superfamily subfamily IB hydrolase, TIGR014902e-1892.4
NC_016582:7101701:710170171017017102537837Streptomyces bingchenggensis BCW-1 chromosome, complete genomemorphological differentiation-associated protein2e-1789.4
NC_011768:3854455:385588038558803856542663Desulfatibacillum alkenivorans AK-01, complete genomeHAD-superfamily subfamily IB hydrolase, TIGR014902e-1789
NC_003155:5616000:562228656222865623119834Streptomyces avermitilis MA-4680, complete genomemorphological differentiation-associated protein3e-1788.6
NC_016114:3938721:394742439474243948263840Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeHAD-superfamily hydrolase9e-1787
NC_011979:589874:593387593387594106720Geobacter sp. FRC-32, complete genomeHAD-superfamily subfamily IB hydrolase, TIGR014902e-1582
NC_002677:1462233:1484289148428914860281740Mycobacterium leprae TN, complete genomepossible transferase4e-1478.2
NC_011896:1462258:1484313148431314860521740Mycobacterium leprae Br4923, complete genomeputative transferase4e-1478.2
NC_010557:207846:207846207846208541696Burkholderia ambifaria MC40-6 chromosome 3, complete sequenceHAD-superfamily subfamily IB hydrolase, TIGR014904e-1374.7
NC_009921:4948500:4955996495599649583592364Frankia sp. EAN1pec, complete genomeHAD-superfamily subfamily IB hydrolase, TIGR014906e-1374.3
NC_012207:2747599:2745860274586027476021743Mycobacterium bovis BCG str. Tokyo 172, complete genomeputative transmembrane phospholipid biosynthesis enzyme1e-1273.2
NC_002945:2757821:2756082275608227578241743Mycobacterium bovis AF2122/97, complete genomebifunctionnal putative L-3-phosphoserine phosphatase/1-acyl-SN-glycerol-3-phosphate acyltransferase1e-1273.2
NC_008769:2754828:2753089275308927548311743Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomeputative transmembrane phospholipid biosynthesis bifunctionnal enzyme plsC: putative l-3-phosphoserine phosphatase + 1-ACYL-SN-GLYCEROL-3-PHOSPHATE AC1e-1273.2
NC_000962:2791019:2789280278928027910221743Mycobacterium tuberculosis H37Rv, complete genomePOSSIBLE TRANSMEMBRANE PHOSPHOLIPID BIOSYNTHESIS BIFUNCTIONNAL ENZYME PLSC: PUTATIVE L-3-PHOSPHOSERINE PHOSPHATASE (O-PHOSPHOSERINE PHOSPHOHYDROLASE) 3e-1272
NC_009525:2802987:2801248280124828029901743Mycobacterium tuberculosis H37Ra, complete genomebifunctional transmembrane phospholipid biosynthesis enzyme PlsC3e-1272
NC_010694:2716348:272023627202362720886651Erwinia tasmaniensis, complete genomeHAD-superfamily hydrolase, subfamily IB6e-1270.9
NC_015656:2795784:2815207281520728175822376Frankia symbiont of Datisca glomerata chromosome, complete genomeHAD-superfamily hydrolase1e-1170.1
NC_007777:2459357:246182724618272462507681Frankia sp. CcI3, complete genomeHAD-superfamily subfamily IB, PSPase-like1e-1169.7
NC_014330:2520906:253918525391852539841657Brachyspira pilosicoli 95/1000 chromosome, complete genomeputative phosphoserine phosphatase SerB3e-1168.6
NC_018604:1489567:151067815106781511334657Brachyspira pilosicoli WesB complete genomeputative phosphoserine phosphatase SerB3e-1168.6
NC_018607:1251357:127194412719441272543600Brachyspira pilosicoli B2904 chromosome, complete genomeHAD-superfamily hydrolase2e-1065.9
NC_008278:4023918:4031582403158240340172436Frankia alni ACN14a, complete genomePutative fatty acyl coA reductase4e-1064.7
NC_019908:700000:700901700901701506606Brachyspira pilosicoli P43/6/78 chromosome, complete genomephosphoserine phosphatase SerB7e-0960.8
NC_016111:6175975:618444561844456185143699Streptomyces cattleya NRRL 8057, complete genomehypothetical protein8e-0960.5
NC_007777:2638580:2654498265449826569572460Frankia sp. CcI3, complete genomeHAD-superfamily subfamily IB, PSPase-like1e-0859.7
NC_016612:443398:449628449628450278651Klebsiella oxytoca KCTC 1686 chromosome, complete genomeHAD superfamily hydrolase2e-0859.3
NC_014328:1046958:104695810469581047602645Clostridium ljungdahlii ATCC 49587 chromosome, complete genomephosphoserine phosphatase4e-0858.5
NC_015501:1200411:120309612030961203611516Porphyromonas asaccharolytica DSM 20707 chromosome, completeHAD-superfamily subfamily IB hydrolase, TIGR014905e-0857.8
NC_016582:9664000:9681086968108696823421257Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative phosphoserine phosphatase1e-0757
NC_002163:1354215:137205613720561372691636Campylobacter jejuni subsp. jejuni NCTC 11168, complete genomehypothetical protein1e-0757
NC_021175:597968:597968597968598615648Streptococcus oligofermentans AS 1.3089, complete genomephosphoserine phosphatase8e-0857
NC_006569:370846:383108383108383779672Silicibacter pomeroyi DSS-3 megaplasmid, complete sequenceHAD-superfamily hydrolase, subfamily IB4e-0755.1
NC_004757:427483:477187477187478017831Nitrosomonas europaea ATCC 19718, complete genomepossible serB; phosphoserine phosphatase protein2e-0652.4
NC_008390:2448379:245191424519142452597684Burkholderia cepacia AMMD chromosome 1, complete sequenceHAD-superfamily subfamily IB hydrolase, TIGR014905e-0651.2
NC_016932:1791868:1791868179186817931511284Corynebacterium pseudotuberculosis 316 chromosome, complete genomephosphoserine phosphatase7e-0650.8
NC_014394:3036758:306766830676683068282615Gallionella capsiferriformans ES-2 chromosome, complete genomeHAD-superfamily subfamily IB hydrolase, TIGR014908e-0650.4