Pre_GI: BLASTP Hits

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Query: NC_009512:5632591:5677051 Pseudomonas putida F1, complete genome

Start: 5677051, End: 5677833, Length: 783

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008027:5533311:555357955535795554361783Pseudomonas entomophila L48, complete genomehypothetical protein1e-106386
NC_009348:2034500:204015020401502040944795Aeromonas salmonicida subsp. salmonicida A449, complete genomehypothetical protein2e-54212
NC_014931:3642779:364337136433713644216846Variovorax paradoxus EPS chromosome, complete genomeprotein of unknown function DUF812e-38159
NC_015222:1607757:162247916224791623276798Nitrosomonas sp. AL212 chromosome, complete genomehypothetical protein1e-37156
NC_011206:863987:872866872866873672807Acidithiobacillus ferrooxidans ATCC 53993, complete genomeprotein of unknown function DUF816e-36150
NC_011761:684969:693860693860694654795Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completehypothetical protein6e-36150
NC_015563:1951368:198349619834961984431936Delftia sp. Cs1-4 chromosome, complete genomehypothetical protein7e-36150
NC_007404:2743877:274850127485012749307807Thiobacillus denitrificans ATCC 25259, complete genomehypothetical protein2e-35149
NC_009719:1135523:115573611557361156569834Parvibaculum lavamentivorans DS-1 chromosome, complete genomehypothetical protein2e-35149
NC_015633:2565753:259898325989832599774792Vibrio anguillarum 775 chromosome chromosome I, complete sequencehypothetical protein2e-35149
NC_007519:1244198:125978312597831260583801Desulfovibrio alaskensis G20 chromosome, complete genomehypothetical protein1e-34146
NC_015942:3090275:310720431072043107998795Acidithiobacillus ferrivorans SS3 chromosome, complete genomehypothetical protein1e-34146
NC_011566:3994239:400537440053744006174801Shewanella piezotolerans WP3, complete genomehypothetical protein6e-31134
NC_015731:1578106:160345416034541604257804Nitrosomonas sp. Is79A3 chromosome, complete genomehypothetical protein1e-26120
NC_017192:1028866:105098210509821051788807Arcobacter sp. L, complete genomehypothetical protein2e-26119
NC_008750:3435495:344364634436463444446801Shewanella sp. W3-18-1, complete genomeprotein of unknown function DUF813e-25115
NC_009438:1282022:128837712883771289177801Shewanella putrefaciens CN-32 chromosome, complete genomehypothetical protein3e-25115
NC_008309:1827809:184600618460061846800795Haemophilus somnus 129PT, complete genomepossible permease9e-22103
NC_014006:3124818:312538631253863126216831Sphingobium japonicum UT26S chromosome 1, complete genomeputative permease1e-20100
NC_012560:201237:212345212345213148804Azotobacter vinelandii DJ, complete genomehypothetical protein2e-1686.7
NC_021150:201237:212345212345213148804Azotobacter vinelandii CA6, complete genomehypothetical protein2e-1686.7
NC_009637:1421885:142629314262931427117825Methanococcus maripaludis C7 chromosome, complete genomehypothetical protein2e-1582.8
NC_010725:4511939:453027545302754531087813Methylobacterium populi BJ001, complete genomeprotein of unknown function DUF813e-1272.4
NC_012997:2107933:211068721106872111505819Teredinibacter turnerae T7901, complete genomemembrane protein3e-1168.9
NC_007681:402773:417264417264418070807Methanosphaera stadtmanae DSM 3091, complete genomeconserved hypothetical membrane-spanning protein9e-1167.4
NC_015474:1035834:105716610571661057915750Pyrococcus sp. NA2 chromosome, complete genomehypothetical protein4e-1065.5
NC_011283:2627050:263118326311832631974792Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein2e-0962.8
NC_013850:2624899:262903226290322629823792Klebsiella variicola At-22 chromosome, complete genomeprotein of unknown function DUF814e-0962
NC_015574:1970967:197183919718391972645807Methanobacterium sp. SWAN-1 chromosome, complete genomehypothetical protein6e-0961.2
NC_016845:2729654:274446927444692745260792Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein3e-0859.3
NC_009648:1956070:196870619687061969497792Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein3e-0859.3
NC_012731:2693091:270232627023262703117792Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein6e-0858.2
NC_015138:2364500:237633923763392377163825Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completehypothetical protein1e-0550.8