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Query: NC_009512:5632591:5674154 Pseudomonas putida F1, complete genome

Start: 5674154, End: 5675383, Length: 1230

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014041:1395761:1401402140140214025291128Zunongwangia profunda SM-A87 chromosome, complete genometyrosine type site-specific recombinase3e-1376.6
NC_005957:3665657:366765636676563668555900Bacillus thuringiensis serovar konkukian str. 97-27, completetyrosine recombinase4e-0963.2
NC_014335:3589726:359683735968373597736900Bacillus cereus biovar anthracis str. CI chromosome, completetyrosine recombinase4e-0963.2
NC_003909:3606177:362138136213813622280900Bacillus cereus ATCC 10987, complete genometyrosine recombinase4e-0963.2
NC_007530:3616828:364611036461103647009900Bacillus anthracis str. 'Ames Ancestor', complete genometyrosine recombinase6e-0962.4
NC_005945:3636321:364667836466783647577900Bacillus anthracis str. Sterne, complete genometyrosine recombinase6e-0962.4
NC_003997:3617000:364598336459833646882900Bacillus anthracis str. Ames, complete genometyrosine recombinase6e-0962.4
NC_012659:3617000:364601036460103646909900Bacillus anthracis str. A0248, complete genomesite-specific tyrosine recombinase XerC6e-0962.4
NC_011969:3575988:357798735779873578886900Bacillus cereus Q1 chromosome, complete genomesite-specific tyrosine recombinase xerc6e-0962.4
NC_017243:2955597:297425129742512975183933Brachyspira intermedia PWS/A chromosome, complete genomesite-specific recombinase XerD1e-0861.6
NC_014934:3809845:3821242382124238223691128Cellulophaga algicola DSM 14237 chromosome, complete genomeintegrase family protein9e-0961.6
NC_011658:3603009:363402836340283634927900Bacillus cereus AH187 chromosome, complete genomesite-specific tyrosine recombinase XerC1e-0861.2
NC_018607:921923:958688958688959614927Brachyspira pilosicoli B2904 chromosome, complete genometyrosine recombinase1e-0758.2
NC_019908:121178:158426158426159352927Brachyspira pilosicoli P43/6/78 chromosome, complete genometyrosine recombinase XerD1e-0758.2
NC_012581:559182:591678591678592577900Bacillus anthracis str. CDC 684 chromosome, complete genomesite-specific tyrosine recombinase XerC4e-0756.2
NC_015167:1666000:168520416852041686097894Cellulophaga lytica DSM 7489 chromosome, complete genomeintegrase family protein5e-0756.2
NC_015703:5865921:5868888586888858705041617Runella slithyformis DSM 19594 chromosome, complete genomeintegron integrase6e-0652.4
NC_014314:576465:658834658834659820987Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeintegrase family protein1e-0551.6