Pre_GI: BLASTP Hits

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Query: NC_009512:5632591:5660854 Pseudomonas putida F1, complete genome

Start: 5660854, End: 5661120, Length: 267

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020063:3690308:373302537330253733897873Enterobacteriaceae bacterium strain FGI 57, complete genometranscriptional regulator2e-1684.7
NC_010002:4287439:431379643137964314698903Delftia acidovorans SPH-1, complete genometranscriptional regulator, LysR family6e-1579.7
NC_003295:659837:662013662013662882870Ralstonia solanacearum GMI1000, complete genomePROBABLE TRANSCRIPTION REGULATOR PROTEIN4e-1477
NC_012660:4669500:468873846887384689601864Pseudomonas fluorescens SBW25 chromosome, complete genomeputative LysR family transcriptional regulator6e-1372.8
NC_013592:2968500:299491129949112995762852Dickeya dadantii Ech586, complete genometranscriptional regulator, LysR family8e-0959.3
NC_009439:2337024:235478523547852355639855Pseudomonas mendocina ymp, complete genomeLysR family transcriptional regulator7e-0649.3