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Query: NC_009512:5632591:5638286 Pseudomonas putida F1, complete genome

Start: 5638286, End: 5642776, Length: 4491

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007643:4294818:4301226430122643057374512Rhodospirillum rubrum ATCC 11170, complete genomehypothetical protein2e-130468
NC_013502:102430:1089231089231135154593Rhodothermus marinus DSM 4252 plasmid pRMAR01, complete sequencehypothetical protein4e-120434
NC_012718:27089:4204342043464854443Burkholderia glumae BGR1 plasmid bglu_2p, complete sequencehypothetical protein4e-119430
NC_013440:1317982:1331658133165813363824725Haliangium ochraceum DSM 14365, complete genomehypothetical protein7e-113409
NC_013851:949973:9633759633759675684194Allochromatium vinosum DSM 180 chromosome, complete genomehypothetical protein1e-102375
NC_010067:3204682:3211587321158732157804194Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-101372
NC_013967:2103968:2136760213676021409534194Haloferax volcanii DS2 chromosome, complete genomehypothetical protein2e-97358
NC_009648:3224495:3233876323387632383484473Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein3e-97357
NC_014729:630152:6484026484026526014200Halogeometricum borinquense DSM 11551 chromosome, complete genomehypothetical protein6e-95350
NC_010803:2474554:2482994248299424866893696Chlorobium limicola DSM 245, complete genomehypothetical protein8e-78293
NC_017955:3670670:3708556370855637126744119Modestobacter marinus, complete genomehypothetical protein2e-71271
NC_010322:4623867:4655791465579146599514161Pseudomonas putida GB-1 chromosome, complete genomehypothetical protein9e-40166
NC_014323:4665610:4677072467707246812234152Herbaspirillum seropedicae SmR1 chromosome, complete genomehypothetical protein5e-37157
NC_013194:4964000:4973270497327049776584389Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completehypothetical protein4e-32141
NC_004663:3216518:3216518321651832207414224Bacteroides thetaiotaomicron VPI-5482, complete genomehypothetical protein4e-1998.2
NC_002950:879930:8985128985129025434032Porphyromonas gingivalis W83, complete genomehypothetical protein1e-1793.6