Pre_GI: BLASTP Hits

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Query: NC_009512:5632591:5637658 Pseudomonas putida F1, complete genome

Start: 5637658, End: 5637999, Length: 342

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008027:5533311:555173355517335552704972Pseudomonas entomophila L48, complete genomethymidylate synthase (TS) (TSase)4e-54209
NC_014039:1766049:178028117802811781093813Propionibacterium acnes SK137 chromosome, complete genomethymidylate synthase7e-1372.4
NC_016516:1751336:176914117691411769953813Propionibacterium acnes TypeIA2 P.acn33 chromosome, completethymidylate synthase9e-1372.4
NC_006322:1959918:197495519749551975794840Bacillus licheniformis ATCC 14580, complete genomethymidylate synthase2e-1064.3
NC_015222:983647:997256997256998050795Nitrosomonas sp. AL212 chromosome, complete genomethymidylate synthase5e-1063.2
NC_009615:4563831:457017345701734570967795Parabacteroides distasonis ATCC 8503 chromosome, complete genomethymidylate synthase6e-1062.8
NC_010694:3055403:307420630742063075000795Erwinia tasmaniensis, complete genomeThymidylate synthase9e-1062.4
NC_017337:1478448:147844814784481479404957Staphylococcus aureus subsp. aureus ED133 chromosome, completethymidylate synthase8e-1062.4
NC_016941:1411500:141304414130441414000957Staphylococcus aureus subsp. aureus MSHR1132, complete genomethymidylate synthase1e-0961.6
NC_015633:2565753:257278425727842573635852Vibrio anguillarum 775 chromosome chromosome I, complete sequenceThymidylate synthase1e-0961.6
NC_007973:2773427:279365327936532794447795Ralstonia metallidurans CH34 chromosome 1, complete sequencethymidylate synthase1e-0961.6
NC_013721:430000:433798433798434670873Gardnerella vaginalis 409-05, complete genomethymidylate synthase3e-0960.8
NC_014479:1831404:185708618570861857925840Bacillus subtilis subsp. spizizenii str. W23 chromosome, completethymidylate synthase3e-0960.5
NC_021182:2360500:238111323811132381904792Clostridium pasteurianum BC1, complete genomethymidylate synthase3e-0960.5
NC_015633:2565753:257207125720712572463393Vibrio anguillarum 775 chromosome chromosome I, complete sequenceThymidylate synthase3e-0960.5
NC_020244:1875834:190783219078321908671840Bacillus subtilis XF-1, complete genomethymidylate synthase3e-0960.5
NC_017195:1852935:188426818842681885107840Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completethymidylate synthase3e-0960.5
NC_019897:3669888:369100236910023691817816Thermobacillus composti KWC4 chromosome, complete genomethymidylate synthase3e-0960.5
NC_014976:17909:282302823029069840Bacillus subtilis BSn5 chromosome, complete genomethymidylate synthase5e-0960.1
NC_014330:2409559:242716224271622427962801Brachyspira pilosicoli 95/1000 chromosome, complete genomethymidylate synthase4e-0960.1
NC_019908:852230:852230852230853030801Brachyspira pilosicoli P43/6/78 chromosome, complete genomethymidylate synthase4e-0960.1
NC_016047:1978312:200353120035312004370840Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completethymidylate synthase4e-0960.1
NC_018607:1134900:115091411509141151714801Brachyspira pilosicoli B2904 chromosome, complete genomethymidylate synthase4e-0960.1
NC_018604:1329228:134523913452391346039801Brachyspira pilosicoli WesB complete genomethymidylate synthase4e-0960.1
NC_017343:1391124:139112413911241392080957Staphylococcus aureus subsp. aureus ECT-R 2, complete genomethymidylate synthase6e-0959.7
NC_013450:1446952:144695214469521447908957Staphylococcus aureus subsp. aureus ED98, complete genomethymidylate synthase6e-0959.7
NC_009632:1557122:155712215571221558078957Staphylococcus aureus subsp. aureus JH1 chromosome, completethymidylate synthase6e-0959.7
NC_009487:1557248:155724815572481558204957Staphylococcus aureus subsp. aureus JH9 chromosome, completethymidylate synthase6e-0959.7
NC_009782:1510396:151039615103961511352957Staphylococcus aureus subsp. aureus Mu3, complete genomethymidylate synthase6e-0959.7
NC_002758:1508996:150899615089961509952957Staphylococcus aureus subsp. aureus Mu50, complete genomethymidylate synthase6e-0959.7
NC_002745:1432585:143258514325851433541957Staphylococcus aureus subsp. aureus N315, complete genomethymidylate synthase6e-0959.7
NC_003923:1436139:143613914361391437095957Staphylococcus aureus subsp. aureus MW2, complete genomethymidylate synthase6e-0959.7
NC_002953:1464693:146469314646931465649957Staphylococcus aureus subsp. aureus MSSA476, complete genomethymidylate synthase6e-0959.7
NC_011566:3994239:400443840044384005289852Shewanella piezotolerans WP3, complete genomeThymidylate synthetase (thyA), putative6e-0959.7
NC_007795:1370500:137068913706891371645957Staphylococcus aureus subsp. aureus NCTC 8325, complete genomethymidylate synthase, putative5e-0959.7
NC_002951:1474465:147446514744651475421957Staphylococcus aureus subsp. aureus COL, complete genomethymidylate synthase5e-0959.7
NC_010079:1465356:146535614653561466312957Staphylococcus aureus subsp. aureus USA300_TCH1516, completethymidylate synthase5e-0959.7
NC_017347:1483163:148316314831631484119957Staphylococcus aureus subsp. aureus T0131 chromosome, completeThymidylate synthase5e-0959.7
NC_017342:1848031:188673418867341887690957Staphylococcus aureus subsp. aureus TCH60 chromosome, completethymidylate synthase5e-0959.7
NC_017341:1482882:148288214828821483838957Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,thymidylate synthase5e-0959.7
NC_017338:1419500:141950014195001420456957Staphylococcus aureus subsp. aureus JKD6159 chromosome, completethymidylate synthase5e-0959.7
NC_016928:1440319:144031914403191441275957Staphylococcus aureus subsp. aureus M013 chromosome, completeThymidylate synthase5e-0959.7
NC_016912:1374351:137435113743511375307957Staphylococcus aureus subsp. aureus VC40 chromosome, completethymidylate synthase5e-0959.7
NC_009641:1470500:147064514706451471601957Staphylococcus aureus subsp. aureus str. Newman chromosome,thymidylate synthase5e-0959.7
NC_002952:1497785:149778514977851498741957Staphylococcus aureus subsp. aureus MRSA252, complete genomethymidylate synthase5e-0959.7
NC_007793:1451409:145140914514091452365957Staphylococcus aureus subsp. aureus USA300, complete genomethymidylate synthase5e-0959.7
NC_007622:1397407:139808613980861399042957Staphylococcus aureus RF122, complete genomethymidylate synthase5e-0959.7
NC_017190:2130651:214734021473402148179840Bacillus amyloliquefaciens LL3 chromosome, complete genomeThymidylate synthase 17e-0959.3
NC_017188:1172181:130881713088171309656840Bacillus amyloliquefaciens TA208 chromosome, complete genomethymidylate synthase2e-0858.2
NC_017191:1173989:131039413103941311233840Bacillus amyloliquefaciens XH7 chromosome, complete genomethymidylate synthase2e-0858.2
NC_012559:731859:753803753803754597795Laribacter hongkongensis HLHK9, complete genomeTysY1e-0858.2
NC_017351:1464209:146420914642091465165957Staphylococcus aureus subsp. aureus 11819-97 chromosome, completethymidylate synthase1e-0858.2
NC_019896:2158223:216657421665742167413840Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completethymidylate synthase2e-0857.8
NC_018720:1611213:163199016319901632865876Bifidobacterium asteroides PRL2011 chromosome, complete genomethymidylate synthase5e-0856.6
NC_014448:803106:816286816286817146861Mycoplasma hyorhinis HUB-1 chromosome, complete genomeThymidylate synthase 25e-0856.6
NC_019842:2134803:216145921614592162253795Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,thymidylate synthase4e-0856.6
NC_009725:2072475:210343621034362104230795Bacillus amyloliquefaciens FZB42, complete genomeThyB4e-0856.6
NC_008255:1500067:150443015044301505224795Cytophaga hutchinsonii ATCC 33406, complete genomethymidylate synthetase6e-0856.2
NC_012590:850130:865891865891866697807Corynebacterium aurimucosum ATCC 700975, complete genomeThymidylate synthase6e-0856.2
NC_015683:732668:744445744445745242798Corynebacterium ulcerans BR-AD22 chromosome, complete genomeThymidylate synthase3e-0753.9
NC_008435:2368000:237206323720632372965903Rhodopseudomonas palustris BisA53, complete genomeThymidylate synthase3e-0753.5
NC_014643:382500:398223398223399131909Rothia dentocariosa ATCC 17931 chromosome, complete genomethymidylate synthase4e-0753.5
NC_010830:1794559:179737917973791798173795Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein6e-0753.1
NC_013199:1407742:140774214077421408512771Lactobacillus rhamnosus Lc 705, complete genomethymidylate Synthase6e-0752.8
NC_002935:781172:797640797640798452813Corynebacterium diphtheriae NCTC 13129, complete genomethymidylate synthase6e-0752.8
NC_002677:1822500:183302618330261833826801Mycobacterium leprae TN, complete genomethymidylate synthase6e-0752.8
NC_010519:445936:446755446755447606852Haemophilus somnus 2336 chromosome, complete genomethymidylate synthase2e-0651.2
NC_008309:1827809:184432618443261845177852Haemophilus somnus 129PT, complete genomethymidylate synthetase2e-0651.2
NC_015673:397947:416598416598417434837Corynebacterium resistens DSM 45100 chromosome, complete genomeThymidylate synthase3e-0650.8
NC_007164:511171:528170528170528991822Corynebacterium jeikeium K411, complete genomehypothetical protein9e-0648.9