Pre_GI: BLASTP Hits

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Query: NC_009512:3334579:3356123 Pseudomonas putida F1, complete genome

Start: 3356123, End: 3356959, Length: 837

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014365:3123853:313546531354653136274810Desulfarculus baarsii DSM 2075 chromosome, complete genomehypothetical protein5e-23108
NC_008786:3323167:3332918333291833360733156Verminephrobacter eiseniae EF01-2, complete genomeexporters of the RND superfamily-like protein2e-1996.3
NC_009663:946285:960978960978961730753Sulfurovum sp. NBC37-1, complete genomehypothetical protein4e-1892
NC_016603:3259432:3269999326999932737453747Acinetobacter calcoaceticus PHEA-2 chromosome, complete genomeexporter of the RND superfamily3e-1685.9
NC_017171:155836:1662971662971699473651Acinetobacter baumannii MDR-ZJ06 chromosome, complete genomeRND superfamily-like exporter5e-1685.1
NC_017387:147906:1585021585021620173516Acinetobacter baumannii TCDC-AB0715 chromosome, complete genomeRND superfamily exporter5e-1685.1
NC_009085:131000:1416481416481451183471Acinetobacter baumannii ATCC 17978, complete genomeRND superfamily-like exporters5e-1685.1
NC_010410:3777076:3781023378102337846733651Acinetobacter baumannii AYE, complete genomeputative efflux pump membrane transporter (RND superfamily)7e-1684.7
NC_011586:164746:1752131752131788633651Acinetobacter baumannii AB0057 chromosome, complete genomepolyketide cyclase/dehydrase family7e-1684.7
NC_011595:3607402:3611349361134936149993651Acinetobacter baumannii AB307-0294, complete genomepolyketide cyclase / dehydrase and lipid transport family protein7e-1684.7
NC_010611:154307:1648151648151684653651Acinetobacter baumannii ACICU, complete genomepredicted exporter of the RND superfamily6e-1684.7
NC_017162:158289:1686061686061722563651Acinetobacter baumannii 1656-2 chromosome, complete genomeRND superfamily-like exporter6e-1684.7
NC_014259:3984568:3988508398850839921613654Acinetobacter sp. DR1 chromosome, complete genomeRND superfamily exporter1e-1584
NC_015578:3266855:328103832810383281829792Treponema primitia ZAS-2 chromosome, complete genomehypothetical protein2e-1583.2
NC_007645:2533274:255252025525202553374855Hahella chejuensis KCTC 2396, complete genomehypothetical protein1e-1273.6
NC_015501:1762450:177988317798831780668786Porphyromonas asaccharolytica DSM 20707 chromosome, completehypothetical protein2e-1273.2
NC_008789:1641774:165763616576361658457822Halorhodospira halophila SL1, complete genomehypothetical protein1e-0963.9