Pre_GI: BLASTP Hits

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Query: NC_009512:27783:39826 Pseudomonas putida F1, complete genome

Start: 39826, End: 41523, Length: 1698

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010322:29983:4060840608423051698Pseudomonas putida GB-1 chromosome, complete genomehypothetical protein01118
NC_002947:8394:2785027850295471698Pseudomonas putida KT2440, complete genomehypothetical protein01118
NC_010501:30000:4454244542462391698Pseudomonas putida W619, complete genomeprotein of unknown function DUF170501118
NC_017986:2548720:2574030257403025757271698Pseudomonas putida ND6 chromosome, complete genomehypothetical protein01061
NC_015733:5909821:5921913592191359234931581Pseudomonas putida S16 chromosome, complete genomehypothetical protein0946
NC_004578:4432983:4436285443628544379281644Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein6e-129461
NC_007005:1738500:1758149175814917598251677Pseudomonas syringae pv. syringae B728a, complete genomeSulfatase8e-126451
NC_004578:6334735:6362330636233063639791650Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein5e-124445
NC_016830:1645879:1669263166926316709121650Pseudomonas fluorescens F113 chromosome, complete genometransmembrane sulfatase8e-124444
NC_013364:1257801:1280009128000912816281620Escherichia coli O111:H- str. 11128, complete genomeputative membrane-associated metal-dependent hydrolase3e-118426
NC_013361:1284579:1308571130857113101901620Escherichia coli O26:H11 str. 11368 chromosome, complete genomemembrane-associated metal-dependent hydrolase6e-118424
NC_013008:1307392:1331860133186013334791620Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein9e-118424
NC_011353:1307106:1331574133157413331931620Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeintegral membrane protein9e-118424
NC_002655:1448605:1471760147176014733791620Escherichia coli O157:H7 EDL933, complete genomehypothetical protein9e-118424
NC_002655:1053082:1076153107615310777721620Escherichia coli O157:H7 EDL933, complete genomehypothetical protein9e-118424
NC_009348:3029963:3059680305968030613051626Aeromonas salmonicida subsp. salmonicida A449, complete genomemembrane-associated, metal-dependent hydrolase1e-117424
AP010958:3853082:3863541386354138651601620Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative membrane-associated, metal-dependent hydrolase2e-117423
NC_013353:3853082:3863541386354138651601620Escherichia coli O103:H2 str. 12009, complete genomemembrane-associated, metal-dependent hydrolase2e-117423
NC_016818:2836851:2836851283685128384851635Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative membrane-associated, metal-dependent hydrolase4e-114412
NC_009350:137645:1446061446061462311626Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, completeputative sulfatase2e-113410
NC_009350:137645:1463011463011479231623Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, completeputative sulfatase2e-113410
NC_013508:1289159:1325627132562713272521626Edwardsiella tarda EIB202, complete genomeputative sulfatase5e-113408
NC_010067:3247169:3270322327032232719651644Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-112407
NC_016147:623666:6403386403386420531716Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeinner membrane protein2e-109396
NC_019940:929071:9307079307079323231617Thioflavicoccus mobilis 8321 chromosome, complete genomemembrane-associated, metal-dependent hydrolase2e-108393
NC_010002:1879220:1912670191267019144361767Delftia acidovorans SPH-1, complete genomesulfatase6e-107388
NC_008782:1917634:1943299194329919449631665Acidovorax sp. JS42, complete genomesulfatase4e-105382
NC_017518:1701958:1722848172284817244821635Neisseria meningitidis NZ-05/33 chromosome, complete genomeputative sulfatase9e-105381
NC_003112:1685330:1701922170192217035561635Neisseria meningitidis MC58, complete genomeYhbX/YhjW/YijP/YjdB family protein9e-105381
NC_010995:1101614:1103502110350211051601659Cellvibrio japonicus Ueda107, complete genomesulfatase1e-104381
NC_009659:1984980:1993155199315519946721518Janthinobacterium sp. Marseille chromosome, complete genomehypothetical protein8e-104378
NC_002695:1364833:1387988138798813892741287Escherichia coli O157:H7 str. Sakai, complete genomeputative outer membrane protein3e-102372
NC_014541:3927500:3947380394738039490231644Ferrimonas balearica DSM 9799 chromosome, complete genomephosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase2e-101370
NC_013446:2820000:2828782282878228303651584Comamonas testosteroni CNB-2, complete genomesulfatase2e-100366
NC_018679:278250:2846142846142862211608Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completesulfatase1e-97357
NC_015633:2565753:2589243258924325908921650Vibrio anguillarum 775 chromosome chromosome I, complete sequenceIntegral membrane protein6e-97355
NC_015497:3794000:3800182380018238017891608Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomesulfatase2e-93343
NC_012969:2136243:2220333222033322219941662Methylovorus glucosetrophus SIP3-4 chromosome, complete genomesulfatase2e-89330
NC_014733:2095996:2116998211699821186321635Methylovorus sp. MP688 chromosome, complete genomesulfatase3e-89330
NC_011745:3443371:347501534750153475890876Escherichia coli ED1a chromosome, complete genomehypothetical protein2e-79296
NC_011138:397329:397727397727398629903Alteromonas macleodii 'Deep ecotype', complete genomeputative sulfatase6e-79295
NC_009441:3597020:3610835361083536123551521Flavobacterium johnsoniae UW101 chromosome, complete genomelipid A phosphoethanolamine transferase2e-60233
NC_015566:1941407:1953534195353419551861653Serratia sp. AS12 chromosome, complete genomesulfatase2e-44180
NC_012559:2854640:2876074287607428777621689Laribacter hongkongensis HLHK9, complete genomehypothetical protein5e-42172
NC_020064:79422:1020591020591037981740Serratia marcescens FGI94, complete genomeputative membrane-associated, metal-dependent hydrolase6e-41169
NC_010465:62348:9231592315940061692Yersinia pseudotuberculosis YPIII, complete genomesulfatase1e-40168
NC_008150:4601202:4616617461661746183081692Yersinia pestis Antiqua, complete genomehypothetical protein2e-40167
NC_009436:203365:2033652033652050561692Enterobacter sp. 638, complete genomephosphoethanolamine transferase2e-40167
NC_015968:204969:2108302108302125211692Enterobacter asburiae LF7a chromosome, complete genomesulfatase9e-40165
NC_011601:3951324:3957076395707639587671692Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomephosphoethanolamine transferase3e-37156
NC_015224:4386599:4391193439119343928841692Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,phosphoethanolamine transferase6e-37155
NC_004337:3590323:3679848367984836815721725Shigella flexneri 2a str. 301, complete genomehypothetical protein2e-36154
NC_017047:1434500:1458716145871614603921677Rahnella aquatilis HX2 chromosome, complete genomephosphoethanolamine transferase1e-34148
NC_015061:1481500:1505773150577315074491677Rahnella sp. Y9602 chromosome, complete genomesulfatase1e-34148
NC_012214:3931824:3934861393486139365281668Erwinia pyrifoliae Ep1/96, complete genomephosphoethanolamine transferase2e-34147
NC_013971:3713000:3714301371430137159681668Erwinia amylovora ATCC 49946 chromosome, complete genomephosphoethanolamine transferase EptB6e-34145
NC_013961:3709800:3714043371404337157101668Erwinia amylovora, complete genomeUPF0141 inner membrane protein yhjW6e-34145
NC_006347:3843228:3866890386689038685901701Bacteroides fragilis YCH46, complete genomeputative integral membrane protein9e-30132
NC_006834:1602994:1624537162453716261951659Xanthomonas oryzae pv. oryzae KACC10331, complete genomeconserved hypothetical protein, putative integral membrane protein1e-22108
NC_007705:1583373:1606777160677716083661590Xanthomonas oryzae pv. oryzae MAFF 311018, complete genomehypothetical protein1e-22108
NC_017267:3612682:3616586361658636181751590Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completesulfatase2e-22107
NC_010688:1192410:1247633124763312492911659Xanthomonas campestris pv. campestris, complete genomehypothetical protein1e-21105
NC_016514:1142607:1165290116529011668701581Enterobacter cloacae EcWSU1 chromosome, complete genomephosphoethanolamine transferase yhbX2e-1894.4
NC_013173:1259898:1266638126663812683321695Desulfomicrobium baculatum DSM 4028, complete genomesulfatase1e-1688.6
NC_015437:27325:7424574245760741830Selenomonas sputigena ATCC 35185 chromosome, complete genomesulfatase2e-1480.9
NC_010002:1879220:1902189190218919038441656Delftia acidovorans SPH-1, complete genomesulfatase1e-1171.6
NC_013446:2820000:285039728503972851395999Comamonas testosteroni CNB-2, complete genomesulfatase1e-0965.1
NC_012108:1067876:1089653108965310915121860Desulfobacterium autotrophicum HRM2, complete genomeputative sulfatase (transmembrane protein)5e-0963.2
NC_013416:875758:8877058877058892191515Aggregatibacter actinomycetemcomitans D11S-1, complete genomeDca7e-0859.3
NC_011138:397329:400142400142400870729Alteromonas macleodii 'Deep ecotype', complete genomelipid A phosphoethanolamine transferase, associated with polymyxin resistance8e-0859.3
NC_014910:755192:8014618014618033651905Alicycliphilus denitrificans BC chromosome, complete genomesulfatase8e-0755.8