Pre_GI: BLASTP Hits

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Query: NC_009512:1691930:1713133 Pseudomonas putida F1, complete genome

Start: 1713133, End: 1713921, Length: 789

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015138:4905935:492439449243944925041648Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completechemotaxis phosphatase, CheZ3e-1789
NC_014910:4026613:404138940413894042021633Alicycliphilus denitrificans BC chromosome, complete genomechemotaxis phosphatase chez2e-1892.8
NC_015422:4395388:440965844096584410290633Alicycliphilus denitrificans K601 chromosome, complete genomechemotaxis phosphatase, CheZ2e-1892.8
NC_007298:778723:807693807693808556864Dechloromonas aromatica RCB, complete genomeChemotaxis phosphatase, CheZ1e-26120
NC_010002:661696:665189665189665803615Delftia acidovorans SPH-1, complete genomechemotaxis phosphatase, CheZ3e-1995.5
NC_015563:606783:610276610276610890615Delftia sp. Cs1-4 chromosome, complete genomechemotaxis phosphatase, CheZ3e-1995.9
NC_014500:3071764:307897730789773079621645Dickeya dadantii 3937 chromosome, complete genomechemotaxis response - phosphatase cheZ1e-24113
NC_013592:1668092:170619117061911706835645Dickeya dadantii Ech586, complete genomechemotaxis phosphatase, CheZ5e-26118
NC_012880:1765920:180223818022381802882645Dickeya dadantii Ech703, complete genomechemotaxis phosphatase, CheZ7e-23107
NC_012559:2309566:232417523241752325119945Laribacter hongkongensis HLHK9, complete genomeCheZ3e-31135
NC_009654:3849774:386936638693663870154789Marinomonas sp. MWYL1, complete genomechemotaxis phosphatase, CheZ1e-58226
NC_012968:1352463:135429313542931354985693Methylotenera mobilis JLW8, complete genomechemotaxis phosphatase, CheZ4e-27121
NC_012968:865465:881281881281881946666Methylotenera mobilis JLW8, complete genomechemotaxis phosphatase, CheZ3e-1995.9
NC_015731:1731896:174401817440181744776759Nitrosomonas sp. Is79A3 chromosome, complete genomechemotaxis phosphatase, CheZ1e-25116
NC_014562:1772842:179789317978931798534642Pantoea vagans C9-1 chromosome, complete genomeChemotaxis protein cheZ4e-26118
NC_014258:42262:457704577046384615Pantoea vagans C9-1 plasmid pPag3, complete sequencemethionyl-tRNA synthetase2e-1169.7
NC_004129:1848701:187237418723741873162789Pseudomonas fluorescens Pf-5, complete genomechemotaxis protein CheZ3e-123441
NC_007492:1735595:175444317544431755231789Pseudomonas fluorescens PfO-1, complete genomeChemotaxis phosphatase, CheZ4e-120430
NC_017986:4374979:439618243961824396970789Pseudomonas putida ND6 chromosome, complete genomechemotaxis phosphatase CheZ1e-150531
NC_016818:1963875:198579419857941986438645Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completechemotaxis protein5e-24111
NC_003919:2233000:225712522571252257751627Xanthomonas axonopodis pv. citri str. 306, complete genomechemotaxis related protein5e-1581.6
NC_003902:2211790:222893522289352229561627Xanthomonas campestris pv. campestris str. ATCC 33913, completechemotaxis related protein2e-1479.7
NC_010688:2532929:255329225532922553918627Xanthomonas campestris pv. campestris, complete genomeChemotaxis phosphatase CheZ1e-1480.5
NC_007508:2234080:225037922503792251005627Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomechemotaxis phosphatase CheZ5e-1581.6
NC_017267:2326443:234545823454582346084627Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completechemotaxis phosphatase CheZ3e-1479