Pre_GI: BLASTP Hits

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Query: NC_009512:1691930:1711059 Pseudomonas putida F1, complete genome

Start: 1711059, End: 1711892, Length: 834

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002947:4931476:493221349322134933046834Pseudomonas putida KT2440, complete genomeflagellar number regulator FleN1e-151535
NC_010501:4080937:408215340821534082986834Pseudomonas putida W619, complete genomeCobyrinic acid ac-diamide synthase2e-150531
NC_007492:1735595:175231917523191753149831Pseudomonas fluorescens PfO-1, complete genomeCobyrinic acid a,c-diamide synthase4e-146517
NC_017986:4374979:439413243941324394941810Pseudomonas putida ND6 chromosome, complete genomeflagellar number regulator FleN4e-146516
NC_004129:1848701:187024818702481871069822Pseudomonas fluorescens Pf-5, complete genomeflagellar synthesis regulator FleN4e-136484
NC_003919:2233000:225893022589302259889960Xanthomonas axonopodis pv. citri str. 306, complete genomeflagellar biosynthesis switch protein2e-75282
NC_010688:2532929:255509825550982555982885Xanthomonas campestris pv. campestris, complete genomeFlagellar synthesis regulator FleN2e-75282
NC_003902:2211790:223074122307412231718978Xanthomonas campestris pv. campestris str. ATCC 33913, completeflagellar biosynthesis switch protein1e-75282
NC_017267:2326443:234727523472752348159885Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completeflagellar biosynthesis regulator FleN3e-75281
NC_007508:2234080:225219722521972253081885Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeflagellar synthesis regulator FleN3e-75281
NC_019940:293476:306356306356307246891Thioflavicoccus mobilis 8321 chromosome, complete genomechromosome partitioning ATPase4e-73274
NC_020409:168916:181090181090181986897Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeFlagellar synthesis regulator FleN9e-54210
NC_007759:1356439:136389013638901364843954Syntrophus aciditrophicus SB, complete genomeflagellar synthesis regulator1e-53210
NC_013223:685628:712957712957713862906Desulfohalobium retbaense DSM 5692, complete genomeCobyrinic acid ac-diamide synthase4e-50198
NC_010001:3266561:328207632820763282957882Clostridium phytofermentans ISDg, complete genomeCobyrinic acid ac-diamide synthase8e-48190
NC_014377:1089894:109412310941231094995873Thermosediminibacter oceani DSM 16646 chromosome, complete genomecobyrinic acid ac-diamide synthase4e-47188
NC_012778:841934:846447846447847328882Eubacterium eligens ATCC 27750, complete genomeflagellar biosynthesis protein FlhG3e-46185
NC_021184:2238500:225197922519792252863885Desulfotomaculum gibsoniae DSM 7213, complete genomeATPase involved in chromosome partitioning1e-38160
NC_015222:1127675:112767511276751128571897Nitrosomonas sp. AL212 chromosome, complete genomeCobyrinic acid ac-diamide synthase8e-37154
NC_019908:852230:860821860821861699879Brachyspira pilosicoli P43/6/78 chromosome, complete genomeflagellar synthesis regulator FleN5e-37154
NC_014330:2409559:241849424184942419372879Brachyspira pilosicoli 95/1000 chromosome, complete genomeflagellar synthesis regulator FleN5e-37154
NC_018604:1329228:133656813365681337446879Brachyspira pilosicoli WesB complete genomeflagellar synthesis regulator FleN5e-37154
NC_018607:1134900:114224111422411143119879Brachyspira pilosicoli B2904 chromosome, complete genomecobyrinic acid ac-diamide synthase5e-37154
NC_014328:1135854:114916411491641150042879Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative flagellar synthesis regulator FleN3e-36152
NC_010741:775000:780727780727781641915Treponema pallidum subsp. pallidum SS14, complete genomeATP-binding protein2e-36152
NC_015714:768500:774161774161775075915Treponema paraluiscuniculi Cuniculi A chromosome, complete genomeputative flagellar synthesis regulator FleN2e-36152
NC_000919:773784:779279779279780193915Treponema pallidum subsp. pallidum str. Nichols, complete genomeATP-binding protein (ylxH-1)2e-36152
NC_016842:775368:780863780863781777915Treponema pallidum subsp. pertenue str. SamoaD chromosome, completeputative flagellar synthesis regulator FleN2e-36152
NC_016843:775371:781050781050781964915Treponema pallidum subsp. pertenue str. Gauthier chromosome,putative flagellar synthesis regulator FleN2e-36152
NC_016844:775334:781217781217782131915Treponema pallidum subsp. pallidum DAL-1 chromosome, completeputative flagellar synthesis regulator FleN2e-36152
NC_016848:775822:781317781317782231915Treponema pallidum subsp. pertenue str. CDC2 chromosome, completeputative flagellar synthesis regulator FleN2e-36152
NC_017268:775000:780529780529781443915Treponema pallidum subsp. pallidum str. Chicago chromosome,ATP-binding protein2e-36152
NC_021508:775264:780759780759781673915Treponema pallidum subsp. pallidum SS14, complete genomeputative flagellar synthesis regulator FleN2e-36152
NC_012440:659646:678260678260679117858Persephonella marina EX-H1, complete genomeflagellar biosynthesis switch protein FlhG7e-36150
NC_013939:212331:2134792134792154101932Deferribacter desulfuricans SSM1, complete genomehypothetical protein2e-35149
NC_010723:833870:856005856005856865861Clostridium botulinum E3 str. Alaska E43, complete genomeATPases involved in chromosome partitioning, MinD family3e-35148
NC_010674:858397:877707877707878567861Clostridium botulinum B str. Eklund 17B, complete genomeATPases involved in chromosome partitioning, MinD family1e-34147
NC_016629:2971860:298651229865122987333822Desulfovibrio africanus str. Walvis Bay chromosome, completeflagellar synthesis regulator FleN6e-35147
NC_006156:271410:280578280578281465888Borrelia garinii PBi chromosome linear, complete sequenceminD-related ATP-binding protein2e-34146
NC_014150:233194:242984242984243847864Brachyspira murdochii DSM 12563 chromosome, complete genomeCobyrinic acid ac-diamide synthase2e-34145
NC_008710:277207:283829283829284719891Borrelia turicatae 91E135, complete genomeflagellar synthesis regulator FleN4e-34145
NC_015921:272517:280365280365281252888Borrelia bissettii DN127 chromosome, complete genomeATP-binding protein (YlxH-1)7e-34144
NC_001318:270488:281800281800282687888Borrelia burgdorferi B31, complete genomeATP-binding protein (ylxH-1)7e-34144
NC_011728:269853:281168281168282055888Borrelia burgdorferi ZS7, complete genomeATP-binding protein7e-34144
NC_008277:272741:280688280688281575888Borrelia afzelii PKo, complete genomeminD-related ATP-binding protein6e-34144
NC_017238:272980:280927280927281814888Borrelia afzelii PKo chromosome, complete genomeATP-binding protein6e-34144
NC_020291:4903981:492026249202624921116855Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeflagellar biosynthesis protein FlhG6e-34144
NC_020409:560278:567838567838568647810Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeFlagellar synthesis regulator FleN5e-34144
NC_017243:1499757:151249015124901513353864Brachyspira intermedia PWS/A chromosome, complete genomeflagellar synthesis regulator FleN2e-33143
NC_002937:1915787:193044019304401931258819Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completeflagellar synthesis regulator FleN, putative2e-33142
NC_012225:377441:387587387587388450864Brachyspira hyodysenteriae WA1, complete genomeflagellar synthesis regulator FleN3e-33142
NC_008346:983816:990087990087990989903Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeParA protein5e-33141
NC_006177:3192500:320597832059783206868891Symbiobacterium thermophilum IAM 14863, complete genomeflagellar biosynthesis switch protein5e-31134
NC_021182:2883716:289224628922462893121876Clostridium pasteurianum BC1, complete genomeATPase involved in chromosome partitioning7e-31134
NC_007298:778723:815338815338816228891Dechloromonas aromatica RCB, complete genomeputative MinD-related protein3e-28125
NC_000909:467607:483625483625484419795Methanocaldococcus jannaschii DSM 2661, complete genomecell division inhibitor minD4e-23108
NC_017095:166896:188311188311189147837Fervidobacterium pennivorans DSM 9078 chromosome, complete genomechromosome partitioning ATPase7e-22104
NC_009616:1433430:143261614326161433446831Thermosipho melanesiensis BI429 chromosome, complete genomecobyrinic acid a,c-diamide synthase7e-22104
NC_013156:728397:746160746160746975816Methanocaldococcus fervens AG86, complete genomecell division ATPase MinD2e-21103
NC_012039:185607:207688207688208551864Campylobacter lari RM2100, complete genomeconserved hypothetical protein, ATPase, ParA family6e-1994.7
NC_020911:2921925:295855629585562959344789Octadecabacter antarcticus 307, complete genomehypothetical protein2e-1686.7
NC_009617:588897:599110599110599910801Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeseptum site-determining protein MinD6e-1684.7
NC_020291:5778999:579723657972365798036801Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeseptum site-determining protein MinD2e-1583.6
NC_009484:1627734:163197916319791632824846Acidiphilium cryptum JF-5 chromosome, complete genomecobyrinic acid a,c-diamide synthase1e-1480.5
NC_015186:1698000:170224117022411703086846Acidiphilium multivorum AIU301, complete genomecobyrinic acid a,c-diamide synthase1e-1480.5
NC_019897:2645404:264656026465602647351792Thermobacillus composti KWC4 chromosome, complete genomeseptum site-determining protein MinD2e-1479.7
NC_003030:1375764:139437313943731395164792Clostridium acetobutylicum ATCC 824, complete genomeSeptum site-determining protein MinD, ATPase3e-1479.3
NC_015687:1377367:139597613959761396767792Clostridium acetobutylicum DSM 1731 chromosome, complete genomeseptum site-determining protein MinD, ATPase3e-1479.3
NC_017295:1375180:139378913937891394580792Clostridium acetobutylicum EA 2018 chromosome, complete genomeSeptum site-determining protein MinD, ATPase3e-1479.3
NC_014335:4181710:418602741860274186824798Bacillus cereus biovar anthracis str. CI chromosome, completeseptum site-determining protein; cell division inhibitor5e-1478.2
NC_012559:731859:747963747963748829867Laribacter hongkongensis HLHK9, complete genomeFleN6e-1478.2
NC_005945:4251789:425581142558114256608798Bacillus anthracis str. Sterne, complete genomeseptum site-determining protein MinD1e-1377.4
NC_006274:4295730:429975242997524300549798Bacillus cereus E33L, complete genomeseptum site-determining protein; cell division inhibitor1e-1377.4
NC_007530:4251773:425543942554394256236798Bacillus anthracis str. 'Ames Ancestor', complete genomeseptum site-determining protein mind1e-1377.4
NC_005957:4244019:424489942448994245696798Bacillus thuringiensis serovar konkukian str. 97-27, completeseptum site-determining protein; cell division inhibitor1e-1377.4
NC_012472:4255729:426004642600464260843798Bacillus cereus 03BB102, complete genomeseptum site-determining protein MinD1e-1377.4
NC_003997:4252000:425531242553124256109798Bacillus anthracis str. Ames, complete genomeseptum site-determining protein MinD1e-1377.4
NC_011658:4243561:424529442452944246091798Bacillus cereus AH187 chromosome, complete genomeseptum site-determining protein MinD1e-1377.4
NC_011969:4140000:414321841432184144015798Bacillus cereus Q1 chromosome, complete genomeseptum site-determining protein; cell division inhibitor1e-1377.4
NC_012659:4252000:425533942553394256136798Bacillus anthracis str. A0248, complete genomeseptum site-determining protein MinD1e-1377.4
NC_016771:4195888:419907741990774199874798Bacillus cereus NC7401, complete genomeseptum site-determining protein MinD1e-1377.4
NC_021182:2160580:217550421755042176307804Clostridium pasteurianum BC1, complete genomeseptum site-determining protein MinD9e-1477.4
NC_017200:4267408:426828842682884269085798Bacillus thuringiensis serovar finitimus YBT-020 chromosome,septum site-determining protein MinD1e-1377
NC_014221:38000:479544795448760807Truepera radiovictrix DSM 17093 chromosome, complete genomeseptum site-determining protein MinD2e-1376.6
NC_014623:4535544:455806745580674558969903Stigmatella aurantiaca DW4/3-1 chromosome, complete genomecobq/cobb/mind/para nucleotide binding domain-containing protein2e-1376.6
NC_010184:4287999:429118442911844291981798Bacillus weihenstephanensis KBAB4, complete genomeseptum site-determining protein MinD2e-1376.3
NC_016012:396910:396910396910397701792Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeseptum site-determining protein MinD2e-1376.3
NC_010516:3234791:324838832483883249185798Clostridium botulinum B1 str. Okra, complete genomeseptum site-determining protein MinD2e-1273.6
NC_009698:3046833:306041930604193061216798Clostridium botulinum A str. Hall chromosome, complete genomeseptum site-determining protein MinD2e-1273.6
NC_009699:3217315:323091232309123231709798Clostridium botulinum F str. Langeland chromosome, complete genomeseptum site-determining protein MinD2e-1273.6
NC_012563:3416509:342687134268713427668798Clostridium botulinum A2 str. Kyoto, complete genomeseptum site-determining protein MinD2e-1273.2
NC_018515:4334240:436935543693554370149795Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeseptum site-determining protein MinD3e-1272.8
NC_009633:2350892:236432423643242365121798Alkaliphilus metalliredigens QYMF chromosome, complete genomeseptum site-determining protein MinD4e-1272
NC_011126:1241655:126518012651801265974795Hydrogenobaculum sp. Y04AAS1, complete genomeseptum site-determining protein MinD6e-1271.6
NC_016584:5388500:540342654034265404220795Desulfosporosinus orientis DSM 765 chromosome, complete genomeseptum site-determining protein MinD6e-1271.6
NC_018664:1663324:166332416633241664112789Clostridium acidurici 9a chromosome, complete genomeflagellar biosynthesis protein FlhG8e-1271.2
NC_000961:539500:549768549768550505738Pyrococcus horikoshii OT3, complete genomecell division inhibitor MinD9e-1270.9
NC_014328:794000:807245807245808042798Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative septum site-determining protein MinD9e-1270.9
NC_007426:205390:2217882217882230411254Natronomonas pharaonis DSM 2160, complete genomeparA domain ATP-binding protein1e-1170.5
NC_015557:1232772:125598612559861256780795Hydrogenobaculum sp. 3684 chromosome, complete genomeseptum site-determining protein MinD2e-1169.7
NC_015587:1232642:125585612558561256650795Hydrogenobaculum sp. SHO chromosome, complete genomeseptum site-determining protein MinD2e-1169.7
NC_020411:1232962:125618112561811256975795Hydrogenobaculum sp. HO, complete genomeseptum site-determining protein MinD2e-1169.7
NC_000868:1386592:139120613912061391943738Pyrococcus abyssi GE5, complete genomecell division inhibitor (minD-2)3e-1169.3
NC_020411:1232962:1249373124937312504161044Hydrogenobaculum sp. HO, complete genomeATPase-like, ParA/MinD3e-1065.9
NC_015557:1232772:1249178124917812502211044Hydrogenobaculum sp. 3684 chromosome, complete genomeATPase-like, ParA/MinD3e-1065.9
NC_015587:1232642:1249048124904812500911044Hydrogenobaculum sp. SHO chromosome, complete genomeATPase-like, ParA/MinD3e-1065.9
NC_011126:1241655:1258032125803212590751044Hydrogenobaculum sp. Y04AAS1, complete genomeMrp protein5e-1065.1
NC_011297:1224749:123325912332591234053795Dictyoglomus thermophilum H-6-12, complete genomeseptum site-determining protein MinD5e-1065.1
NC_017179:1197763:121732212173221218119798Clostridium difficile BI1, complete genomeseptum site-determining protein (cell division inhibitor)7e-1064.7
NC_013315:1187986:120754512075451208342798Clostridium difficile CD196 chromosome, complete genomeseptum site-determining protein7e-1064.7
NC_009089:1329826:134938513493851350182798Clostridium difficile 630, complete genomeseptum site-determining protein (cell division inhibitor)7e-1064.7
NC_011661:1411383:141352114135211414315795Dictyoglomus turgidum DSM 6724, complete genomeseptum site-determining protein MinD2e-0860.1
NC_008346:410940:410940410940411761822Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeseptum site-determining protein MinD4e-0858.9
NC_015161:2018493:203353220335322034338807Deinococcus proteolyticus MRP chromosome, complete genomeseptum site-determining protein MinD5e-0858.5
NC_005090:1812833:1838243183824318393551113Wolinella succinogenes DSM 1740, complete genomePUTATIVE ATP/GTP-BINDING PROTEIN (MRP HOMOLOG)5e-0755.1
NC_000961:888000:895143895143896045903Pyrococcus horikoshii OT3, complete genomehypothetical protein2e-0653.1
NC_014658:743453:763248763248764066819Methanothermus fervidus DSM 2088 chromosome, complete genomeatpase-like, para/mind3e-0652.8