Pre_GI: BLASTP Hits

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Query: NC_009512:1691930:1696903 Pseudomonas putida F1, complete genome

Start: 1696903, End: 1697679, Length: 777

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017986:4374979:437995243799524380728777Pseudomonas putida ND6 chromosome, complete genomeflagellar biosynthesis protein FliR6e-110397
NC_002947:4931476:494658249465824947358777Pseudomonas putida KT2440, complete genomeflagellar biosynthesis protein4e-107387
NC_010501:4080937:409588040958804096656777Pseudomonas putida W619, complete genomeflagellar biosynthetic protein FliR9e-105379
NC_004129:1848701:185379718537971854564768Pseudomonas fluorescens Pf-5, complete genomeflagellar biosynthesis protein7e-81300
NC_007492:1735595:173754017375401738325786Pseudomonas fluorescens PfO-1, complete genomeflagellar biosynthesis protein8e-79293
NC_009654:3849774:387610238761023876884783Marinomonas sp. MWYL1, complete genomeflagellar biosynthetic protein FliR2e-37155
NC_014366:1814000:183494918349491835728780Gamma proteobacterium HdN1, complete genomeFlagellar biosynthesis protein FliR1e-34146
NC_013851:3300278:330354133035413304323783Allochromatium vinosum DSM 180 chromosome, complete genomeflagellar biosynthetic protein FliR2e-34145
NC_019940:293476:300920300920301693774Thioflavicoccus mobilis 8321 chromosome, complete genomeflagellar biosynthetic protein FliR2e-33142
NC_014562:1844268:187554118755411876326786Pantoea vagans C9-1 chromosome, complete genomeFlagellar biosynthetic protein fliR2e-22106
NC_009792:2688747:268874726887472689520774Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein3e-22105
NC_005810:3333000:336121233612123361985774Yersinia pestis biovar Microtus str. 91001, complete genomeflagellar biosynthetic protein FliR3e-1892
NC_008149:650706:678873678873679646774Yersinia pestis Nepal516, complete genomeflagellar assembly protein3e-1892
NC_003143:741169:770010770010770783774Yersinia pestis CO92, complete genomeputative flagellar assembly protein3e-1892
NC_009381:522731:550850550850551623774Yersinia pestis Pestoides F chromosome, complete genomeflagellar assembly protein3e-1892
NC_004344:26828:550395503955815777Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein1e-1790.5
NC_010515:1618093:165436216543621655159798Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceflagellar biosynthetic protein FliR1e-1790.5
NC_020911:2921925:294200629420062942833828Octadecabacter antarcticus 307, complete genomeflagellar biosynthetic protein FliR7e-1581.3
NC_013223:685628:707734707734708516783Desulfohalobium retbaense DSM 5692, complete genomeflagellar biosynthetic protein FliR2e-1479.7
NC_013892:2689645:269080526908052691587783Xenorhabdus bovienii SS-2004 chromosome, complete genomeflagellar biosynthetic protein, regulator4e-1478.6
NC_009012:574145:595409595409596194786Clostridium thermocellum ATCC 27405, complete genometype III secretion system inner membrane R protein6e-1477.8
NC_021182:2883716:2896408289640828982371830Clostridium pasteurianum BC1, complete genomeflagellar biosynthetic protein FlhB/flagellar biosynthetic protein FliR1e-1377
NC_014377:1089894:108913310891331089897765Thermosediminibacter oceani DSM 16646 chromosome, complete genomeflagellar biosynthetic protein FliR2e-1273.2
NC_008346:983816:984925984925985686762Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeflagellar biosynthetic protein FliR6e-1271.2
NC_016893:43234:562395623957015777Wigglesworthia glossinidia endosymbiont of Glossina morsitansflagellar export pore protein1e-1170.1
NC_020409:168916:186269186269187060792Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeFlagellar biosynthetic protein fliR3e-1168.9
NC_016894:2931213:293522829352282935983756Acetobacterium woodii DSM 1030 chromosome, complete genomeflagellar biosynthesis protein FliR7e-1167.8
NC_009253:2615777:261684126168412617608768Desulfotomaculum reducens MI-1 chromosome, complete genomeflagellar biosynthesis protein FliR3e-1065.9
NC_012791:2386000:240507724050772405796720Variovorax paradoxus S110 chromosome 1, complete genometype III secretion system inner membrane R protein3e-0962.8
NC_015391:2059191:207640620764062077098693Carnobacterium sp. 17-4 chromosome, complete genomeflagellar biosynthesis protein FliR3e-0962.8
NC_014652:628435:650982650982651764783Caldicellulosiruptor hydrothermalis 108 chromosome, completeflagellar biosynthetic protein flir3e-0962.4
NC_007759:1356439:135849013584901359269780Syntrophus aciditrophicus SB, complete genomeflagellar biosynthetic protein1e-0860.5
NC_014328:1135854:1144086114408611459061821Clostridium ljungdahlii ATCC 49587 chromosome, complete genomebifunctional flagellar biosynthesis proteins FliR/FlhB1e-0860.1
NC_018664:1663324:166832816683281669122795Clostridium acidurici 9a chromosome, complete genomeflagellar biosynthesis protein FliR5e-0858.5
NC_010723:833870:8508728508728527041833Clostridium botulinum E3 str. Alaska E43, complete genomeflagellar biosynthetic protein6e-0858.2
NC_000918:1353310:137854913785491379325777Aquifex aeolicus VF5, complete genomeflagellar biosynthetic protein FliR6e-0858.2
NC_010694:2971170:299086429908642991628765Erwinia tasmaniensis, complete genomeSurface presentation of antigens protein (Spa29 protein), Type III secretion apparatus8e-0857.8
NC_010674:858397:8725658725658744061842Clostridium botulinum B str. Eklund 17B, complete genomeflagellar biosynthetic protein1e-0757.4
NC_009802:1525144:155836215583621559123762Campylobacter concisus 13826, complete genomeflagellar biosynthetic protein FliR1e-0757.4
NC_013961:1622616:164856016485601649330771Erwinia amylovora, complete genomeSurface presentation of antigens protein SpaR1e-0757
NC_013971:1660144:168608816860881686858771Erwinia amylovora ATCC 49946 chromosome, complete genometype III secretion system protein1e-0757
NC_021184:2238500:225729222572922258059768Desulfotomaculum gibsoniae DSM 7213, complete genomeflagellar biosynthetic protein FliR2e-0756.6
NC_017243:1499757:150607415060741506835762Brachyspira intermedia PWS/A chromosome, complete genomeflagellar biosynthetic protein fliR2e-0755.8
NC_012225:377441:381131381131381892762Brachyspira hyodysenteriae WA1, complete genomeflagellar biosynthetic protein fliR3e-0755.5
NC_013971:2876733:289699928969992897763765Erwinia amylovora ATCC 49946 chromosome, complete genometype III secretion system protein5e-0755.1
NC_013961:851044:873537873537874301765Erwinia amylovora, complete genomeSurface presentation of antigens protein spaR5e-0755.1
NC_014330:2409559:241229724122972413058762Brachyspira pilosicoli 95/1000 chromosome, complete genomeflagellar biosynthesis protein FliR1e-0653.9
NC_018604:1329228:133032913303291331132804Brachyspira pilosicoli WesB complete genomeflagellar biosynthesis protein FliR1e-0653.5
NC_018607:1134900:113600211360021136805804Brachyspira pilosicoli B2904 chromosome, complete genomeflagellar biosynthetic protein FliR1e-0653.5
NC_019908:852230:867123867123867926804Brachyspira pilosicoli P43/6/78 chromosome, complete genomeflagellar biosynthesis protein FliR1e-0653.5
NC_014150:233194:249501249501250304804Brachyspira murdochii DSM 12563 chromosome, complete genomeflagellar biosynthetic protein FliR3e-0652.4
NC_008593:1103293:1122918112291811246451728Clostridium novyi NT, complete genomeflagellar biosynthetic protein FlhB4e-0652
NC_014366:2513352:251499225149922515783792Gamma proteobacterium HdN1, complete genomeType III secretory pathway protein8e-0650.8