Pre_GI: BLASTP Hits

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Query: NC_009512:1691930:1694938 Pseudomonas putida F1, complete genome

Start: 1694938, End: 1695402, Length: 465

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017986:4374979:437796943779694378451483Pseudomonas putida ND6 chromosome, complete genomeFliN2e-71267
NC_002947:4931476:494885949488594949344486Pseudomonas putida KT2440, complete genomeflagellar motor switch protein4e-70263
NC_010501:4080937:409817840981784098642465Pseudomonas putida W619, complete genomeflagellar motor switch protein FliN7e-63239
NC_007492:1735595:173559517355951736053459Pseudomonas fluorescens PfO-1, complete genomeflagellar motor switch protein2e-57221
NC_004129:1848701:185182918518291852290462Pseudomonas fluorescens Pf-5, complete genomeflagellar motor switch protein5e-49192
NC_007912:2768363:276796327679632768370408Saccharophagus degradans 2-40, complete genomesurface presentation of antigens (SpoA) protein3e-38157
NC_014366:1814000:183272818327281833141414Gamma proteobacterium HdN1, complete genomeFlagellar motor switch FliN9e-38155
NC_013851:3300278:331189933118993312345447Allochromatium vinosum DSM 180 chromosome, complete genomeflagellar motor switch protein FliN2e-36150
NC_009654:3849774:387831938783193878780462Marinomonas sp. MWYL1, complete genomeflagellar motor switch protein FliN5e-34143
NC_019940:293476:298826298826299197372Thioflavicoccus mobilis 8321 chromosome, complete genomeflagellar motor switch protein FliN2e-29127
NC_014837:2586870:261088226108822611292411Pantoea sp. At-9b chromosome, complete genomeflagellar motor switch protein FliN1e-26118
NC_007519:3527207:354353235435323544059528Desulfovibrio alaskensis G20 chromosome, complete genomesurface presentation of antigens (SPOA) protein2e-26118
NC_012880:1765920:183055418305541830964411Dickeya dadantii Ech703, complete genomeflagellar motor switch protein FliN1e-25115
NC_014562:1844268:187369818736981874105408Pantoea vagans C9-1 chromosome, complete genomeFlagellar motor switch protein fliN7e-26115
NC_007759:1356439:135643913564391356930492Syntrophus aciditrophicus SB, complete genomeflagellar motor switch protein2e-25114
NC_014500:3023762:306009530600953060511417Dickeya dadantii 3937 chromosome, complete genomeflagellar motor switch protein fliN3e-25114
NC_016893:43234:584315843158850420Wigglesworthia glossinidia endosymbiont of Glossina morsitansflagellar motor switching and energizing component2e-22104
NC_013223:685628:705832705832706161330Desulfohalobium retbaense DSM 5692, complete genomeflagellar motor switch protein FliN3e-22103
NC_010723:801215:8012158012158023661152Clostridium botulinum E3 str. Alaska E43, complete genomeflagellar motor switch protein FliN9e-22102
NC_016751:1979201:1993227199322719946031377Marinitoga piezophila KA3 chromosome, complete genomeflagellar motor switch protein FliN7e-22102
NC_014652:628435:6479166479166490461131Caldicellulosiruptor hydrothermalis 108 chromosome, completechec, inhibitor of mcp methylation / flin fusion protein3e-21100
NC_020291:4944835:4993760499376049949621203Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeflagellar motor switch phosphatase FliY3e-21100
NC_010516:2900057:2912728291272829138881161Clostridium botulinum B1 str. Okra, complete genomeflagellar motor switch protein FliN9e-2199.4
NC_021182:2921000:2936970293697029381181149Clostridium pasteurianum BC1, complete genomeflagellar motor switch protein FliN8e-2199.4
NC_010520:2937981:2953084295308429542441161Clostridium botulinum A3 str. Loch Maree, complete genomeflagellar motor switch protein FliN8e-2199.4
NC_009699:2901497:2917261291726129184211161Clostridium botulinum F str. Langeland chromosome, complete genomeflagellar motor switch protein8e-2199.4
NC_017297:2905138:2917398291739829185581161Clostridium botulinum F str. 230613 chromosome, complete genomeflagellar motor switch protein FliN8e-2199.4
NC_012658:2930244:2945156294515629463161161Clostridium botulinum Ba4 str. 657 chromosome, complete genomeflagellar motor switch protein8e-2199.4
NC_009012:574145:5920165920165932361221Clostridium thermocellum ATCC 27405, complete genomeCheC, inhibitor of MCP methylation8e-2199.4
NC_012563:3090954:3107671310767131088311161Clostridium botulinum A2 str. Kyoto, complete genomeflagellar motor switch protein FliN9e-2199
NC_009495:2876865:2893582289358228947421161Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeflagellar motor switch protein9e-2199
NC_009697:2790277:2806994280699428081541161Clostridium botulinum A str. ATCC 19397 chromosome, completeflagellar motor switch protein9e-2199
NC_009698:2727203:2743920274392027450801161Clostridium botulinum A str. Hall chromosome, complete genomeflagellar motor switch protein9e-2199
NC_009617:4946000:4955939495593949571351197Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeflagellar motor switch protein1e-2098.6
NC_018607:2375344:2388581238858123896271047Brachyspira pilosicoli B2904 chromosome, complete genomeflagellar motor switch protein FliN2e-2098.2
NC_019908:1467000:1480929148092914819751047Brachyspira pilosicoli P43/6/78 chromosome, complete genomeflagellar motor switch protein FliN2e-2098.2
NC_014330:1784515:1788618178861817896641047Brachyspira pilosicoli 95/1000 chromosome, complete genomeflagellar motor switch protein FliN2e-2098.2
NC_017295:2286911:2305431230543123066181188Clostridium acetobutylicum EA 2018 chromosome, complete genomeflagellar motor switch protein2e-2097.8
NC_018604:492068:4964124964124974581047Brachyspira pilosicoli WesB complete genomeflagellar motor switch protein FliN2e-2097.8
NC_008576:4467745:447890444789044479317414Magnetococcus sp. MC-1, complete genomeflagellar motor switch protein FliN4e-2097.1
NC_017243:491681:5083175083175093991083Brachyspira intermedia PWS/A chromosome, complete genomeflagellar motor switch protein5e-2096.7
NC_016012:561687:5662645662645673401077Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeflagellar motor switch protein5e-2096.7
NC_015391:2099472:2099472209947221005511080Carnobacterium sp. 17-4 chromosome, complete genomeflagellar motor switching and energizing phosphatase4e-2096.7
NC_015913:624859:6266526266526277281077Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomeflagellar motor switch phosphatase FliY4e-2096.7
NC_014150:2201251:2215333221533322164121080Brachyspira murdochii DSM 12563 chromosome, complete genomeflagellar motor switch protein FliN6e-2096.3
NC_012225:1575432:1600390160039016014721083Brachyspira hyodysenteriae WA1, complete genomeflagellar motor switch protein7e-2096.3
NC_020911:2921925:294418129441812944477297Octadecabacter antarcticus 307, complete genomeflagellar motor switch protein FliN7e-2096.3
NC_004557:1826977:1838003183800318392531251Clostridium tetani E88, complete genomeflagellar motor switch protein8e-2095.9
NC_008593:1060548:1080379108037910815691191Clostridium novyi NT, complete genomeflagellar switch protein FliY, contains CheC-like domain1e-1995.5
NC_015425:1207314:1211758121175812130111254Clostridium botulinum BKT015925 chromosome, complete genomeflagellar motor switch protein FliN1e-1995.5
NC_014328:1046958:1058621105862110598261206Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative flagellar motor switch protein1e-1995.5
NC_004344:26828:572215722157628408Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein1e-1995.1
NC_019978:625476:6441576441576452901134Halobacteroides halobius DSM 5150, complete genomeflagellar motor switch protein FliN2e-1994.7
NC_000919:773784:7874217874217884671047Treponema pallidum subsp. pallidum str. Nichols, complete genomeflagellar motor switch protein (fliY)2e-1994.4
NC_015714:768500:7823037823037833491047Treponema paraluiscuniculi Cuniculi A chromosome, complete genomebifunctional chemotaxis protein CheC/flagellar motor switch protein FliY2e-1994.4
NC_010741:775000:7888697888697899151047Treponema pallidum subsp. pallidum SS14, complete genomeflagellar motor switch protein2e-1994.4
NC_016842:775368:7890057890057900511047Treponema pallidum subsp. pertenue str. SamoaD chromosome, completebifunctional chemotaxis protein CheC/flagellar motor switch protein FliY2e-1994.4
NC_016843:775371:7891927891927902381047Treponema pallidum subsp. pertenue str. Gauthier chromosome,bifunctional chemotaxis protein CheC/flagellar motor switch protein FliY2e-1994.4
NC_016848:775822:7894597894597905051047Treponema pallidum subsp. pertenue str. CDC2 chromosome, completebifunctional chemotaxis protein CheC/flagellar motor switch protein FliY2e-1994.4
NC_017268:775000:7886717886717897171047Treponema pallidum subsp. pallidum str. Chicago chromosome,flagellar motor switch protein2e-1994.4
NC_021508:775264:7889017889017899471047Treponema pallidum subsp. pallidum SS14, complete genomebifunctional chemotaxis protein CheC/flagellar motor switch protein FliY2e-1994.4
NC_016844:775334:7893597893597904051047Treponema pallidum subsp. pallidum DAL-1 chromosome, completebifunctional chemotaxis protein CheC/flagellar motor switch protein FliY3e-1994.4
NC_009664:533021:539118539118539867750Kineococcus radiotolerans SRS30216, complete genomeflagellar motor switch protein FliN1e-1892
NC_009633:2725128:2725128272512827263091182Alkaliphilus metalliredigens QYMF chromosome, complete genomeflagellar motor switch protein4e-1890.5
NC_021184:2238500:2244250224425022456381389Desulfotomaculum gibsoniae DSM 7213, complete genomeflagellar motor switch protein FliN4e-1787
NC_018664:1663324:1671062167106216722071146Clostridium acidurici 9a chromosome, complete genomeflagellar motor switch phosphatase FliY5e-1786.7
NC_012440:659646:686871686871687443573Persephonella marina EX-H1, complete genomeflagellar motor switch protein FliN6e-1786.3
NC_012225:1575432:159993915999391600193255Brachyspira hyodysenteriae WA1, complete genomeflagellar motor switch protein7e-1786.3
NC_014150:2201251:221656222165622216894333Brachyspira murdochii DSM 12563 chromosome, complete genome8e-1785.9
NC_010673:291679:292313292313292657345Borrelia hermsii DAH, complete genomeflagellar motor switch protein FliN2e-1685.1
NC_008710:277207:291605291605291949345Borrelia turicatae 91E135, complete genomeflagellar motor switch protein FliN2e-1684.7
NC_006156:271410:288358288358288699342Borrelia garinii PBi chromosome linear, complete sequenceflagellar motor switch protein3e-1684.3
NC_001318:270488:289576289576289917342Borrelia burgdorferi B31, complete genomeflagellar motor switch protein (fliN)3e-1684
NC_011728:269853:288944288944289285342Borrelia burgdorferi ZS7, complete genomeflagellar switch protein FliY3e-1684
NC_015921:272517:288141288141288482342Borrelia bissettii DN127 chromosome, complete genomeflagellar motor switch protein FliN3e-1684
NC_008277:272741:288467288467288808342Borrelia afzelii PKo, complete genomeflagellar motor switch protein3e-1684
NC_017238:272980:288706288706289047342Borrelia afzelii PKo chromosome, complete genomeflagellar motor switch protein FliN3e-1684
NC_016894:2931213:2937868293786829390011134Acetobacterium woodii DSM 1030 chromosome, complete genomeflagellar motor switch protein FliN4e-1477
NC_012438:1211940:124043012404301241008579Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeflagellar motor switch protein FliN1e-1375.1
NC_006677:435652:446810446810447127318Gluconobacter oxydans 621H, complete genomeflagellar motor switch protein7e-1373.2
NC_009484:1627734:163713316371331637531399Acidiphilium cryptum JF-5 chromosome, complete genomeflagellar motor switch protein FliN9e-1372.8
NC_015186:1698000:170739517073951707715321Acidiphilium multivorum AIU301, complete genomeflagellar motor switch protein FliN1e-1272.4
NC_008599:1489868:149197814919781492808831Campylobacter fetus subsp. fetus 82-40, complete genomeflagellar motor switch protein4e-1270.1
NC_008435:1215437:130955713095571309955399Rhodopseudomonas palustris BisA53, complete genomeflagellar motor switch protein FliN8e-1269.3
NC_017187:1832045:183426918342691835135867Arcobacter butzleri ED-1, complete genomeflagellar motor switch protein FliY3e-1064.3
NC_009253:2615777:261907526190752619461387Desulfotomaculum reducens MI-1 chromosome, complete genomesurface presentation of antigens (SPOA) protein5e-1063.5
NC_009850:1954969:195604519560451956914870Arcobacter butzleri RM4018, complete genomeflagellar motor switch protein FliY9e-1062.4
NC_017192:2469667:246966724696672470548882Arcobacter sp. L, complete genomeflagellar motor switch protein FliY4e-0960.5
NC_017179:281069:301038301038301352315Clostridium difficile BI1, complete genomeflagellar motor switch protein4e-0960.5
NC_013720:2898639:290010529001052901094990Pirellula staleyi DSM 6068, complete genomesurface presentation of antigens (SPOA) protein8e-0959.3
NC_014758:1387470:138896413889641389248285Calditerrivibrio nitroreducens DSM 19672 chromosome, completesurface presentation of antigens (spoa) protein1e-0858.9
NC_021184:2238500:225945022594502259845396Desulfotomaculum gibsoniae DSM 7213, complete genomeflagellar motor switch/type III secretory pathway protein6e-0856.6
NC_011772:1575674:159544815954481595807360Bacillus cereus G9842, complete genomeputative flagellar motor switch protein FliN5e-0650.1
NC_017249:2572000:259230025923002592674375Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein9e-0649.3
NC_017187:1832045:184266018426601842947288Arcobacter butzleri ED-1, complete genomeflagellar motor switch protein FliN1e-0549.3
NC_009850:1954969:196445219644521964739288Arcobacter butzleri RM4018, complete genomeflagellar motor switch protein FliN1e-0549.3