Pre_GI: BLASTP Hits

Some Help

Query: NC_009512:1025365:1035982 Pseudomonas putida F1, complete genome

Start: 1035982, End: 1037214, Length: 1233

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008278:5012000:5046368504636850475911224Frankia alni ACN14a, complete genomehypothetical protein; putative Glutathione synthetase ATP-binding domain2e-21103
NC_017249:7993713:8027496802749680287821287Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein4e-21102
NC_011987:362997:3688513688513701101260Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequencebiotin carboxylase4e-2099.4
NC_017160:4508000:4508987450898745102311245Yersinia pestis D182038 chromosome, complete genomeacetyl-CoA carboxylase2e-1997.1
NC_010465:62348:8103381033822771245Yersinia pseudotuberculosis YPIII, complete genomephosphoribosylglycinamide synthetase3e-1996.7
NC_014841:131308:1390631390631403101248Pantoea sp. At-9b plasmid pPAT9B04, complete sequencehypothetical protein8e-1995.1
NC_015381:1318818:1341068134106813423061239Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein1e-1894.4
NC_012779:1820244:1825085182508518263261242Edwardsiella ictaluri 93-146, complete genomehypothetical protein3e-1893.6
NC_010995:4525119:4535045453504545363011257Cellvibrio japonicus Ueda107, complete genomeputative phosphoribosylglycinamide synthetase7e-1788.6
NC_013956:595320:6182086182086194671260Pantoea ananatis LMG 20103 chromosome, complete genomeArgH27e-1685.5
NC_016113:994469:9948049948049960631260Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequencehypothetical protein5e-1479
NC_002678:4885790:4900276490027649015051230Mesorhizobium loti MAFF303099, complete genomehypothetical protein1e-1274.7
NC_015732:982774:9915969915969928521257Spirochaeta caldaria DSM 7334 chromosome, complete genomehypothetical protein1e-1274.3
NC_015733:864959:8871728871728884821311Pseudomonas putida S16 chromosome, complete genomehypothetical protein2e-1273.6
NC_015675:6493444:6524853652485365261391287Mesorhizobium opportunistum WSM2075 chromosome, complete genomeATP-dependent carboxylate-amine ligase domain-containing protein ATP-grasp3e-1273.2
NC_014923:5970182:5970182597018259714681287Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeCarbamoyl-phosphate synthase L chain ATP-binding protein3e-1273.2
NC_019973:5899142:5899142589914259004281287Mesorhizobium australicum WSM2073, complete genomebiotin carboxylase3e-1273.2
NC_014923:5940500:5957129595712959583491221Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeATP-dependent carboxylate-amine ligase domain protein ATP-grasp5e-1272.8
NC_019973:5869500:5886089588608958873091221Mesorhizobium australicum WSM2073, complete genomebiotin carboxylase5e-1272.8
NC_015675:6493444:6511800651180065130201221Mesorhizobium opportunistum WSM2075 chromosome, complete genomeATP-dependent carboxylate-amine ligase domain-containing protein ATP-grasp5e-1272.8
NC_014206:2516000:2542163254216325433981236Geobacillus sp. C56-T3 chromosome, complete genomeATP-dependent carboxylate-amine ligase domain-containing protein ATP-grasp3e-1170.1
NC_014915:1080793:1088971108897110902061236Geobacillus sp. Y412MC52 chromosome, complete genomeATP-dependent carboxylate-amine ligase domain protein ATP-grasp3e-1170.1
NC_013411:1941762:1949027194902719502621236Geobacillus sp. Y412MC61, complete genomeATP-dependent carboxylate-amine ligase domain protein ATP-grasp3e-1170.1
NC_014206:1202907:1211656121165612128791224Geobacillus sp. C56-T3 chromosome, complete genomehypothetical protein5e-1169.3
NC_014479:188009:2038432038432050691227Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeputative amino acid ligase of ATP-grasp superfamily1e-1068.2
NC_014150:3085013:3107308310730831094792172Brachyspira murdochii DSM 12563 chromosome, complete genomeATP-dependent carboxylate-amine ligase domain protein ATP-grasp2e-1067.4
NC_011567:238249:2382492382492394871239Anoxybacillus flavithermus WK1, complete genomeAlanine-anticapsin ligase bacD related protein4e-1066.2
NC_017243:1558000:1577367157736715795142148Brachyspira intermedia PWS/A chromosome, complete genomeL-lactate dehydrogenase9e-1065.1
NC_013592:2059138:2073970207397020752681299Dickeya dadantii Ech586, complete genomeprotein of unknown function DUF2018e-0962
NC_015957:5136500:5147067514706751483591293Streptomyces violaceusniger Tu 4113 chromosome, complete genomeATP-dependent carboxylate-amine ligase domain-containing protein ATP-grasp8e-0962
NC_004578:212468:2225282225282237451218Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein7e-0962
NC_011663:1627220:1644567164456716457961230Shewanella baltica OS223 chromosome, complete genomehypothetical protein1e-0861.2
NC_003888:7659639:7662638766263876638551218Streptomyces coelicolor A3(2), complete genomecarboxylase2e-0860.5
NC_014976:759129:7710707710707723111242Bacillus subtilis BSn5 chromosome, complete genomephosphoribosylglycinamide synthetase2e-0860.5
NC_014500:4883794:4896957489695748981321176Dickeya dadantii 3937 chromosome, complete genomeargininosuccinate lyase3e-0860.1
NC_006270:204000:2051442051442063611218Bacillus licheniformis ATCC 14580, complete genomehypothetical protein3e-0757
NC_006322:203932:2049512049512061681218Bacillus licheniformis ATCC 14580, complete genomehypothetical protein3e-0757
NC_008061:2368517:2375417237541723767781362Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceprotein of unknown function DUF2015e-0755.8
NC_008543:2871747:2890204289020428915651362Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceprotein of unknown function DUF2015e-0755.8
NC_014500:4049384:4060026406002640612251200Dickeya dadantii 3937 chromosome, complete genomeargininosuccinate lyase8e-0755.1
NC_013206:21288:2917129171304031233Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446phosphoribosylglycinamide synthetase1e-0654.7
NC_013440:8405719:8418758841875884199901233Haliangium ochraceum DSM 14365, complete genomeATP-dependent carboxylate-amine ligase domain protein ATP-grasp2e-0653.9
NC_020209:397376:4143374143374156291293Pseudomonas poae RE*1-1-14, complete genomehypothetical protein3e-0653.5
NC_016593:2851243:2858761285876128599901230Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completehypothetical protein3e-0653.1
NC_006510:2778777:2786295278629527875211227Geobacillus kaustophilus HTA426, complete genomehypothetical protein4e-0653.1
NC_011831:2728932:2747266274726627485221257Chloroflexus aggregans DSM 9485, complete genomephosphoribosylglycinamide synthetase4e-0653.1