Pre_GI: BLASTP Hits

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Query: NC_009495:2606238:2607869 Clostridium botulinum A str. ATCC 3502 chromosome, complete genome

Start: 2607869, End: 2609314, Length: 1446

Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well-studied Hall strain that produces type A toxin. Produces botulinum, one of the most potent toxins known. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin. Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009698:2450606:2452237245223724536821446Clostridium botulinum A str. Hall chromosome, complete genomeamino acid permease0913
NC_009697:2478261:2479892247989224813371446Clostridium botulinum A str. ATCC 19397 chromosome, completeamino acid permease0913
NC_012658:2641446:2663215266321526646601446Clostridium botulinum Ba4 str. 657 chromosome, complete genomeamino acid permease family protein0910
NC_012563:2761570:2782140278214027835851446Clostridium botulinum A2 str. Kyoto, complete genomeamino acid permease family protein0908
NC_017297:2635892:2656451265645126578961446Clostridium botulinum F str. 230613 chromosome, complete genomeamino acid permease family protein0908
NC_009699:2654672:2656302265630226577471446Clostridium botulinum F str. Langeland chromosome, complete genomeamino acid permease0908
NC_010516:2594159:2595779259577925972241446Clostridium botulinum B1 str. Okra, complete genomeamino acid permease family protein0895
NC_010520:2668702:2670322267032226717671446Clostridium botulinum A3 str. Loch Maree, complete genomeamino acid permease family protein0895
NC_014507:2319842:2333086233308623345161431Methanoplanus petrolearius DSM 11571 chromosome, complete genomeamino acid permease-associated protein1e-54214
NC_014618:2423661:2444986244498624464371452Enterobacter cloacae SCF1 chromosome, complete genomeamino acid permease5e-53209
NC_008800:4013298:4030666403066640322221557Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative amino acid permease4e-49196
NC_009614:4802000:4809599480959948111761578Bacteroides vulgatus ATCC 8482 chromosome, complete genomeglutamate/gamma-aminobutyrate anti-porter3e-48193
NC_015224:3892972:3907937390793739094931557Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative amino acid permease2e-47190
NC_004741:2526421:2536123253612325375831461Shigella flexneri 2a str. 2457T, complete genomeputative amino acid antiporter3e-45182
NC_008258:2542863:2552467255246725539271461Shigella flexneri 5 str. 8401, complete genomeputative amino acid antiporter3e-45182
NC_004337:2548288:2557990255799025594501461Shigella flexneri 2a str. 301, complete genomeputative amino acid antiporter3e-45182
NC_017328:2586171:2595628259562825970881461Shigella flexneri 2002017 chromosome, complete genomeputative amino acid antiporter3e-45182
NC_009380:4944183:4952656495265649541431488Salinispora tropica CNB-440 chromosome, complete genomeamino acid permease-associated protein6e-43175
NC_014507:2568933:2568933256893325703721440Methanoplanus petrolearius DSM 11571 chromosome, complete genomeamino acid permease-associated protein4e-39162
NC_008262:1139500:1153130115313011545991470Clostridium perfringens SM101, complete genomeamino acid permease family protein1e-30134
NC_003366:1122654:1135498113549811369671470Clostridium perfringens str. 13, complete genomehypothetical protein7e-30132
NC_008261:1332864:1346362134636213478311470Clostridium perfringens ATCC 13124, complete genomeamino acid permease family protein1e-28128
NC_003366:2356148:2377731237773123792091479Clostridium perfringens str. 13, complete genomehypothetical protein1e-24115
NC_008262:2242432:2264082226408222655721491Clostridium perfringens SM101, complete genomeamino acid permease family protein1e-24114
NC_011740:1595381:1615255161525516167901536Escherichia fergusonii ATCC 35469, complete genomeglutamate:gamma-aminobutyric acid antiporter1e-22108
NC_004431:1754627:1754627175462717561621536Escherichia coli CFT073, complete genomeAmino acid antiporter5e-22106
AP010958:1711656:1711656171165617131911536Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted glutamate:gamma-aminobutyric acid antiporter GadC4e-22106
NC_008258:1750964:1771126177112617726611536Shigella flexneri 5 str. 8401, complete genomeacid sensitivity protein, putative transporter4e-22106
NC_010658:1593137:1593137159313715946721536Shigella boydii CDC 3083-94, complete genomeglutamate:gamma aminobutyrate antiporter4e-22106
NC_009801:1678790:1678790167879016803251536Escherichia coli E24377A, complete genomeglutamate:gamma aminobutyrate antiporter4e-22106
NC_004741:1792442:1809541180954118110761536Shigella flexneri 2a str. 2457T, complete genomeacid sensitivity protein, putative transporter4e-22106
NC_007613:1533024:1556412155641215579471536Shigella boydii Sb227, complete genomeacid sensitivity protein, putative transporter4e-22106
NC_013353:1711656:1711656171165617131911536Escherichia coli O103:H2 str. 12009, complete genomeglutamate:gamma-aminobutyric acid antiporter GadC4e-22106
NC_013361:2047170:2047170204717020487051536Escherichia coli O26:H11 str. 11368 chromosome, complete genomeglutamate:gamma-aminobutyric acid antiporter GadC4e-22106
NC_013364:1902761:1902761190276119042961536Escherichia coli O111:H- str. 11128, complete genomeputative glutamate:gamma-aminobutyric acid antiporter GadC4e-22106
NC_013941:1894496:1894496189449618960311536Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeglutamate/gamma-aminobutyrate antiporter4e-22106
NC_016822:1781644:1801998180199818035331536Shigella sonnei 53G, complete genomeglutamate/g-aminobutyrate antiporter4e-22106
NC_011353:2004800:2004800200480020063351536Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeglutamate:gamma aminobutyrate antiporter4e-22106
NC_011094:1050700:1059485105948510609061422Salmonella enterica subsp. enterica serovar Schwarzengrund strinner membrane transporter YcaM6e-21102
NC_005362:1954443:1970494197049419719751482Lactobacillus johnsonii NCC 533, complete genomeamino acid transporter1e-1998.6
NC_009801:995396:9965629965629981841623Escherichia coli E24377A, complete genomeamino acid permease family protein4e-1996.7
NC_008497:79144:7992879928814331506Lactobacillus brevis ATCC 367, complete genomeGlutamate gamma-aminobutyrate antiporter7e-1995.9
NC_006814:51500:5256852568540251458Lactobacillus acidophilus NCFM, complete genomeglutamategamma-aminobutyrate antiporter1e-1895.1
NC_014106:54587:5458754587560291443Lactobacillus crispatus ST1, complete genomeGlutamate/gamma-aminobutyrate antiporter8e-1892
NC_005362:52848:6874268742703371596Lactobacillus johnsonii NCC 533, complete genomehypothetical protein6e-1582.4
NC_008054:1502210:1510839151083915120831245Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, complete2e-1377.4
NC_008529:1514000:1521980152198015234311452Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeAmino acid transporter4e-1376.6
NC_016614:1543333:1565362156536215666991338Vibrio sp. EJY3 chromosome 2, complete sequenceamino acid transporter permease8e-1168.9
NC_014169:2353711:2374179237417923756541476Bifidobacterium longum subsp. longum JDM301 chromosome, completeamino acid permease-associated domain-containing protein5e-1066.2
NC_003366:64908:7853478534798561323Clostridium perfringens str. 13, complete genomeprobable integral membrane transport protein7e-1065.9
NC_015410:2258800:2258800225880022602271428Pseudomonas mendocina NK-01 chromosome, complete genomearginine/ornithine antiporter2e-0964.3
NC_010080:69000:703367033671160825Lactobacillus helveticus DPC 4571, complete genome3e-0963.9
NC_004722:4899940:4917694491769449190041311Bacillus cereus ATCC 14579, complete genomeThreonine transporter4e-0963.5
NC_009697:275919:2905762905762920391464Clostridium botulinum A str. ATCC 19397 chromosome, completelysine-specific permease4e-0963.2
NC_010184:4791000:4808579480857948098921314Bacillus weihenstephanensis KBAB4, complete genomeamino acid permease-associated region4e-0963.2
AC_000091:273325:2745492745492759521404Escherichia coli W3110 DNA, complete genomepredicted S-methylmethionine transporter7e-0962.4
NC_010473:247429:2486532486532500561404Escherichia coli str. K-12 substr. DH10B, complete genomeCP4-6 prophage; predicted S-methylmethionine transporter7e-0962.4
NC_000913:272071:2745492745492759521404Escherichia coli K12, complete genomeCP4-6 prophage; predicted S-methylmethionine transporter7e-0962.4
NC_014963:4091910:4091910409191040932201311Terriglobus saanensis SP1PR4 chromosome, complete genomeamino acid permease-associated region9e-0962
NC_014041:4335948:4336509433650943378251317Zunongwangia profunda SM-A87 chromosome, complete genomeamino acid permease1e-0861.2
NC_018607:662697:6666196666196678271209Brachyspira pilosicoli B2904 chromosome, complete genomeamino acid permease2e-0861.2
NC_019908:1225690:1237862123786212391451284Brachyspira pilosicoli P43/6/78 chromosome, complete genomeamino acid permease2e-0861.2
NC_014330:2026193:2030006203000620313251320Brachyspira pilosicoli 95/1000 chromosome, complete genomeamino acid permease2e-0861.2
NC_018604:789575:7934247934247947071284Brachyspira pilosicoli WesB complete genomeamino acid permease2e-0860.8
NC_016514:891772:9294139294139308371425Enterobacter cloacae EcWSU1 chromosome, complete genomeS-methylmethionine permease4e-0860.1
NC_013198:1921500:1936707193670719381701464Lactobacillus rhamnosus GG, complete genomelysine-specific permease lysP, APC family9e-0858.9
NC_014334:769205:7838707838707855881719Lactobacillus casei str. Zhang chromosome, complete genomeputative L-aspartate transport protein9e-0858.5
NC_019970:2551607:2553100255310025546261527Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeamino acid transporter1e-0758.5
NC_016845:411844:4378304378304393321503Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,inner membrane transporter YjeM1e-0758.2
NC_008526:817628:8346748346748363921719Lactobacillus casei ATCC 334, complete genome2e-0757.8
NC_021066:4177217:4184900418490041862521353Raoultella ornithinolytica B6, complete genomeputative cationic amino acid permease2e-0757.8
NC_010793:721944:7407807407807420631284Orientia tsutsugamushi str. Ikeda, complete genomeamino acid transporter3e-0757
NC_014150:3085013:3089069308906930903521284Brachyspira murdochii DSM 12563 chromosome, complete genomeamino acid permease-associated region3e-0757
NC_013199:1886271:1902978190297819044411464Lactobacillus rhamnosus Lc 705, complete genomeamino acid transporter, lysine-specific permease lysP, APC family4e-0756.6
NC_010999:880878:8973568973568989181563Lactobacillus casei, complete genomePutative L-aspartate transport protein6e-0756.2
NC_007296:1762000:1772812177281217741551344Streptococcus pyogenes MGAS6180, complete genomeamino acid permease7e-0755.8
NC_016887:221788:2235162235162249191404Nocardia cyriacigeorgica GUH-2, complete genomeputative amino acid transporter6e-0755.8
NC_016612:1840325:1865907186590718673881482Klebsiella oxytoca KCTC 1686 chromosome, complete genomeinner membrane transporter YjeM6e-0755.8
NC_008261:381297:3812973812973826791383Clostridium perfringens ATCC 13124, complete genomeamino acid permease family protein8e-0755.5
UCMB5137:3601629:3624806362480636262091404Bacillus atrophaeus UCMB-5137RocE1e-0655.5
NC_009648:4958500:4984217498421749856981482Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeamino acid APC transporter2e-0654.3
NC_010999:1979989:1996957199695719984111455Lactobacillus casei, complete genomeLysine:H(+) symporter3e-0653.9
NC_014334:1775781:1792736179273617941901455Lactobacillus casei str. Zhang chromosome, complete genomeamino acid transporter3e-0653.9
NC_008526:1822000:1836119183611918375731455Lactobacillus casei ATCC 334, complete genomeAmino acid transporter3e-0653.9
NC_003997:467993:4878634878634892841422Bacillus anthracis str. Ames, complete genomeamino acid permease family protein3e-0653.9
NC_005945:467427:4879064879064893271422Bacillus anthracis str. Sterne, complete genomeamino acid permease family protein3e-0653.9
NC_007530:467993:4878634878634892841422Bacillus anthracis str. 'Ames Ancestor', complete genomeamino acid permease family protein3e-0653.9
NC_012659:467893:4877634877634891841422Bacillus anthracis str. A0248, complete genomeamino acid permease family protein3e-0653.9
NC_007181:915000:9322929322929341811890Sulfolobus acidocaldarius DSM 639, complete genomeamino acid permease3e-0653.5
NC_017353:152151:1666501666501682811632Staphylococcus lugdunensis N920143, complete genomeputative amino acid permease4e-0653.1
NC_010468:4252940:4274436427443642757701335Escherichia coli ATCC 8739, complete genomearginine/ornithine antiporter6e-0652.8
CP002797:4411763:4434911443491144362451335Escherichia coli NA114, complete genomeLysine/cadaverine antiporter membrane protein CadB6e-0652.8
NC_013361:5319497:5324994532499453263281335Escherichia coli O26:H11 str. 11368 chromosome, complete genomelysine/cadaverine antiporter6e-0652.8
NC_013199:811929:8269468269468285291584Lactobacillus rhamnosus Lc 705, complete genomeamino acid permease-associated region6e-0652.8
NC_015275:3594890:3627265362726536285871323Clostridium lentocellum DSM 5427 chromosome, complete genomeamino acid permease-associated region6e-0652.8
NC_014259:2948335:2963698296369829651041407Acinetobacter sp. DR1 chromosome, complete genomegamma-aminobutyrate permease5e-0652.8
CP002207:3850000:3850190385019038518091620Bacillus atrophaeus 1942, complete genomeputative H+/amino acid transporter5e-0652.8
NC_014639:3850000:3850190385019038518091620Bacillus atrophaeus 1942 chromosome, complete genomeH+/amino acid transporter5e-0652.8
NC_013198:813830:8324128324128339951584Lactobacillus rhamnosus GG, complete genomeamino acid permease-associated region7e-0652.4
NC_003143:1973867:1986051198605119874241374Yersinia pestis CO92, complete genomearomatic amino acid transport protein8e-0652.4
NC_008149:2652825:2662618266261826639911374Yersinia pestis Nepal516, complete genomearomatic amino acid transport protein8e-0652.4
NC_010159:1710268:1720039172003917214121374Yersinia pestis Angola, complete genomearomatic amino acid transport protein AroP8e-0652.4
NC_004741:4364235:4383674438367443847261053Shigella flexneri 2a str. 2457T, complete genome9e-0652