Pre_GI: BLASTP Hits

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Query: NC_009495:2479465:2512581 Clostridium botulinum A str. ATCC 3502 chromosome, complete genome

Start: 2512581, End: 2513534, Length: 954

Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well-studied Hall strain that produces type A toxin. Produces botulinum, one of the most potent toxins known. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin. Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012658:2525931:253475225347522535747996Clostridium botulinum Ba4 str. 657 chromosome, complete genomehypothetical protein2e-160565
NC_014639:2169277:217149621714962172224729Bacillus atrophaeus 1942 chromosome, complete genomesporulation sigma factor SigK1e-1170.9
CP002207:2169277:217149621714962172224729Bacillus atrophaeus 1942, complete genomesporulation sigma factor SigK1e-1170.9
UCMB5137:2054735:206023320602332060961729Bacillus atrophaeus UCMB-5137sporulation sigma factor SigK1e-1170.9
NC_009725:2517428:252185025218502522572723Bacillus amyloliquefaciens FZB42, complete genomeSpoIIIC2e-1170.5
NC_020410:2509057:251185125118512512573723Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeRNA polymerase sigma-K factor2e-1170.5
NC_017188:2512357:251601825160182516743726Bacillus amyloliquefaciens TA208 chromosome, complete genomesporulation sigma factor SigK2e-1170.5
NC_014551:2510000:251515725151572515879723Bacillus amyloliquefaciens DSM 7, complete genomeRNA polymerase sporulation-specific sigma-K factor precursor (Sigma-27) (C-terminal fragment)2e-1170.5
NC_020272:1384525:140054414005441401266723Bacillus amyloliquefaciens IT-45, complete genomesporulation sigma factor SigK2e-1170.5
NC_017191:2514401:251805925180592518787729Bacillus amyloliquefaciens XH7 chromosome, complete genomesporulation sigma factor SigK1e-1170.5
NC_006322:2658587:266257426625742663299726Bacillus licheniformis ATCC 14580, complete genomeSpoIIIC1e-1170.5
NC_006270:2657726:266171326617132662438726Bacillus licheniformis ATCC 14580, complete genomeRNA polymerase sporulation-specific sigma factor (sigma-K) (C-terminal half)1e-1170.5
NC_017195:2498113:250061925006192501347729Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeRNA polymerase sigma-K factor2e-1170.1
NC_014479:2505823:250902725090272509755729Bacillus subtilis subsp. spizizenii str. W23 chromosome, completesporulation sigma factor SigmaK2e-1170.1
NC_016047:2631511:263408426340842634812729Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeRNA polymerase sigma-K factor2e-1170.1
NC_020291:1389114:139256713925671393274708Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeRNA polymerase sigma-E factor SigE2e-1170.1
NC_019978:2036779:205421120542112054906696Halobacteroides halobius DSM 5150, complete genomeRNA polymerase sigma-K factor4e-1169.3
NC_008346:584305:613841613841614575735Syntrophomonas wolfei subsp. wolfei str. Goettingen, completesigma 28 (flagella/sporulation)9e-1167.8
NC_011969:3627980:365406836540683654787720Bacillus cereus Q1 chromosome, complete genomesporulation sigma factor sige3e-1066.2
NC_014220:837926:841866841866842591726Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG subfamily9e-1064.7
NC_012654:170956:184629184629185513885Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequenceputative RNA polymerase sigma factor8e-0961.2
NC_007644:1603696:161628816162881616968681Moorella thermoacetica ATCC 39073, complete genomesigma 28 (Flagella/Sporulation)9e-0961.2
NC_017195:2273216:229212822921282292895768Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeRNA polymerase sigma-F factor4e-0859.3
NC_017177:192933:210132210132210779648Clostridium difficile BI1, complete genomeSporulation sigma factor SigK5e-0858.9
NC_011969:3627980:365313136531313654000870Bacillus cereus Q1 chromosome, complete genomesporulation sigma factor sigg6e-0858.5
NC_017297:2531750:256721125672112567762552Clostridium botulinum F str. 230613 chromosome, complete genomesigma-70 family RNA polymerase sigma factor1e-0757.4
NC_009699:2552195:256707225670722567623552Clostridium botulinum F str. Langeland chromosome, complete genomesigma-70 family RNA polymerase sigma factor1e-0757.4
NC_014328:1307490:132611813261181326819702Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative RNA polymerase sigma-K factor3e-0756.2
NC_020291:1389114:139335713933571394130774Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeRNA polymerase sigma-G factor SigG3e-0756.2
NC_014657:673500:688886688886689614729Caldicellulosiruptor owensensis OL chromosome, complete genomeRNA polymerase, sigma 28 subunit, flia/whig subfamily3e-0653.1
NC_009633:760872:765332765332765904573Alkaliphilus metalliredigens QYMF chromosome, complete genomeECF subfamily RNA polymerase sigma-24 factor6e-0651.6
NC_019842:2575000:257786225778622578509648Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,sporulation sigma factor SigK8e-0651.6