Pre_GI: BLASTN Hits

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Query: NC_009488:803873 Orientia tsutsugamushi str. Boryong, complete genome

Start: 803873, End: 826363, Length: 22491

Host Lineage: Orientia tsutsugamushi; Orientia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: This strain was isolated from a human in 1995 in Boryong, Korea. Causal agent of scrub typhus. This organism is the causative agent of scrub typhus, and like other members of the Rickettsiales is an obligate intracellular organism. Scrub typhus, which occurs in rural and agricultural areas, is one of the most common infectious diseases in southeast Asia where an estimated 1 million cases occur each year. Many cases are mild, but if left untreated, a variety of serious illnesses can arise and fatality rates can range from 1-35%. Transmission occurs via an insect vector through the bite of the larval trombiculid mite (chiggers). The bacterium is transmitted transovarially in mites (from females to their offspring).




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010793:66850066850068609917600Orientia tsutsugamushi str. Ikeda, complete genome08356BLASTN svgBLASTP svg
NC_010793:12611112611114549019380Orientia tsutsugamushi str. Ikeda, complete genome01298BLASTN svgBLASTP svg
NC_010793:357000*35700037562618627Orientia tsutsugamushi str. Ikeda, complete genome01961BLASTN svgBLASTP svg
NC_010793:54104054104057414833109Orientia tsutsugamushi str. Ikeda, complete genome01961BLASTN svgBLASTP svg
NC_010793:14688491468849148809919251Orientia tsutsugamushi str. Ikeda, complete genome02030BLASTN svgBLASTP svg
NC_010793:16957161695716171809922384Orientia tsutsugamushi str. Ikeda, complete genome02115BLASTN svgBLASTP svg
NC_010793:30488*304885039219905Orientia tsutsugamushi str. Ikeda, complete genome02543BLASTN svgBLASTP svg
NC_010793:12878771287877130645418578Orientia tsutsugamushi str. Ikeda, complete genome02779BLASTN svgBLASTP svg
NC_010793:72194472194474582723884Orientia tsutsugamushi str. Ikeda, complete genome03045BLASTN svgBLASTP svg
NC_010793:81219*8121910439223174Orientia tsutsugamushi str. Ikeda, complete genome03045BLASTN svgBLASTP svg
NC_010793:11582791158279117659918321Orientia tsutsugamushi str. Ikeda, complete genome03051BLASTN svgBLASTP svg
NC_010793:49650049650051508118582Orientia tsutsugamushi str. Ikeda, complete genome04855BLASTN svgBLASTP svg
NC_010793:41684941684944002323175Orientia tsutsugamushi str. Ikeda, complete genome04855BLASTN svgBLASTP svg
NC_010793:15089741508974153217323200Orientia tsutsugamushi str. Ikeda, complete genome04851BLASTN svgBLASTP svg
NC_010793:1811401*1811401187154360143Orientia tsutsugamushi str. Ikeda, complete genome04829BLASTN svgBLASTP svg
NC_010793:17233651723365174939626032Orientia tsutsugamushi str. Ikeda, complete genome04325BLASTN svgBLASTP svg
NC_010793:1628500*1628500164809919600Orientia tsutsugamushi str. Ikeda, complete genome03891BLASTN svgBLASTP svg
NC_010793:1922000*1922000196058138582Orientia tsutsugamushi str. Ikeda, complete genome03227BLASTN svgBLASTP svg
NC_012730:131445*13144515343621992Rickettsia peacockii str. Rustic, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_009883:11975001197500121859921100Rickettsia bellii OSU 85-389, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_007940:32294832294834166218715Rickettsia bellii RML369-C, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_006142:31200031200033450122502Rickettsia typhi str. Wilmington, complete genome3e-0971.9BLASTN svgBLASTP svg