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Query: NC_009488:1430693 Orientia tsutsugamushi str. Boryong, complete genome

Start: 1430693, End: 1464663, Length: 33971

Host Lineage: Orientia tsutsugamushi; Orientia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: This strain was isolated from a human in 1995 in Boryong, Korea. Causal agent of scrub typhus. This organism is the causative agent of scrub typhus, and like other members of the Rickettsiales is an obligate intracellular organism. Scrub typhus, which occurs in rural and agricultural areas, is one of the most common infectious diseases in southeast Asia where an estimated 1 million cases occur each year. Many cases are mild, but if left untreated, a variety of serious illnesses can arise and fatality rates can range from 1-35%. Transmission occurs via an insect vector through the bite of the larval trombiculid mite (chiggers). The bacterium is transmitted transovarially in mites (from females to their offspring).

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010793:17233651723365174939626032Orientia tsutsugamushi str. Ikeda, complete genome011250BLASTN svgBLASTP svg
NC_010793:49650049650051508118582Orientia tsutsugamushi str. Ikeda, complete genome07616BLASTN svgBLASTP svg
NC_010793:41684941684944002323175Orientia tsutsugamushi str. Ikeda, complete genome07616BLASTN svgBLASTP svg
NC_010793:12878771287877130645418578Orientia tsutsugamushi str. Ikeda, complete genome07571BLASTN svgBLASTP svg
NC_010793:15089741508974153217323200Orientia tsutsugamushi str. Ikeda, complete genome07398BLASTN svgBLASTP svg
NC_010793:1628500*1628500164809919600Orientia tsutsugamushi str. Ikeda, complete genome06587BLASTN svgBLASTP svg
NC_010793:1811401*1811401187154360143Orientia tsutsugamushi str. Ikeda, complete genome06351BLASTN svgBLASTP svg
NC_010793:72194472194474582723884Orientia tsutsugamushi str. Ikeda, complete genome05757BLASTN svgBLASTP svg
NC_010793:81219*8121910439223174Orientia tsutsugamushi str. Ikeda, complete genome05757BLASTN svgBLASTP svg
NC_010793:1922000*1922000196058138582Orientia tsutsugamushi str. Ikeda, complete genome04282BLASTN svgBLASTP svg
NC_010793:12611112611114549019380Orientia tsutsugamushi str. Ikeda, complete genome01976BLASTN svgBLASTP svg
NC_010793:66850066850068609917600Orientia tsutsugamushi str. Ikeda, complete genome01844BLASTN svgBLASTP svg
NC_010793:11582791158279117659918321Orientia tsutsugamushi str. Ikeda, complete genome01402BLASTN svgBLASTP svg
NC_010793:14688491468849148809919251Orientia tsutsugamushi str. Ikeda, complete genome0932BLASTN svgBLASTP svg
NC_010793:30488*304885039219905Orientia tsutsugamushi str. Ikeda, complete genome0757BLASTN svgBLASTP svg
NC_010793:16957161695716171809922384Orientia tsutsugamushi str. Ikeda, complete genome0724BLASTN svgBLASTP svg
NC_010793:1075388*1075388110374328356Orientia tsutsugamushi str. Ikeda, complete genome4e-52214BLASTN svgBLASTP svg
NC_010793:54104054104057414833109Orientia tsutsugamushi str. Ikeda, complete genome4e-43184BLASTN svgBLASTP svg
NC_015866:23344823344825473021283Rickettsia heilongjiangensis 054 chromosome, complete genome5e-18101BLASTN svgBLASTP svg
NC_000963:20554620554622772522180Rickettsia prowazekii str. Madrid E, complete genome7e-1487.7BLASTN svgBLASTP svg
NC_016050:23600023600025587419875Rickettsia japonica YH, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_009881:23650023650025585219353Rickettsia akari str. Hartford, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_007940:11780001178000120112223123Rickettsia bellii RML369-C, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_009883:34306734306736795424888Rickettsia bellii OSU 85-389, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_012730:33250033250035137618877Rickettsia peacockii str. Rustic, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_012416:205925*20592522897023046Wolbachia sp. wRi, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_010263:23248223248225109918618Rickettsia rickettsii str. Iowa, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_009882:23240023240025009917700Rickettsia rickettsii str. 'Sheila Smith', complete genome7e-1177.8BLASTN svgBLASTP svg
NC_003103:22595622595624833922384Rickettsia conorii str. Malish 7, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_002978:20087820087822003219155Wolbachia endosymbiont of Drosophila melanogaster, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_014774:67169567169569432722633Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, complete4e-0661.9BLASTN svgBLASTP svg