Pre_GI: BLASTP Hits

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Query: NC_009488:89844:112521 Orientia tsutsugamushi str. Boryong, complete genome

Start: 112521, End: 114278, Length: 1758

Host Lineage: Orientia tsutsugamushi; Orientia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: This strain was isolated from a human in 1995 in Boryong, Korea. Causal agent of scrub typhus. This organism is the causative agent of scrub typhus, and like other members of the Rickettsiales is an obligate intracellular organism. Scrub typhus, which occurs in rural and agricultural areas, is one of the most common infectious diseases in southeast Asia where an estimated 1 million cases occur each year. Many cases are mild, but if left untreated, a variety of serious illnesses can arise and fatality rates can range from 1-35%. Transmission occurs via an insect vector through the bite of the larval trombiculid mite (chiggers). The bacterium is transmitted transovarially in mites (from females to their offspring).




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010793:1811401:1863476186347618652301755Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD01069
NC_010793:416849:4208424208424225961755Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD01055
NC_010793:1158279:1169124116912411708781755Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD01055
NC_010793:1508974:1513498151349815152521755Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD01055
NC_010793:1468849:1468849146884914703841536Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD0895
NC_017044:702483:7220847220847237781695Rickettsia parkeri str. Portsmouth chromosome, complete genomeconjugative transfer protein TraD0764
NC_010793:1628500:1641810164181016428201011Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD0634
NC_009488:1465781:1479205147920514803501146Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein4e-179628
NC_009488:1249492:125489812548981255854957Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein3e-179628
NC_009488:803873:809270809270810226957Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein3e-179628
NC_009488:854500:857766857766858722957Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein4e-178624
NC_009488:1673756:1685432168543216865771146Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein1e-176620
NC_009488:1391975:1405801140580114069461146Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein1e-176620
NC_009488:1430693:143360714336071434488882Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein5e-114412
NC_017028:1030000:104422810442281045058831Candidatus Rickettsia amblyommii str. GAT-30V chromosome, completeputative conjugative transfer protein TraD2e-102373
NC_010793:1287877:130094913009491301482534Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD9e-72271
NC_016846:24500:5201252012542912280Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS2,conjugal transfer protein TraD6e-71268
NC_017044:702483:719163719163719666504Rickettsia parkeri str. Portsmouth chromosome, complete genomeputative conjugative transfer protein TraD9e-67254
NC_010606:25090:2655826558287172160Acinetobacter baumannii ACICU plasmid pACICU2, complete sequenceType IV secretory pathway, VirD4 component2e-66253
NC_009998:62000:7347873478756042127Shewanella baltica OS195 plasmid pS19501, complete sequencetype IV conjugative transfer system coupling protein TraD5e-65249
NC_010660:175200:1802001802001822452046Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence2e-64247
NC_007385:157516:1664251664251686262202Shigella sonnei Ss046 plasmid pSS_046, complete sequenceTraD protein2e-64247
NC_007607:87000:9356593565950791515Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequencehypothetical protein6e-61235
NC_004460:708416:7124647124647145572094Vibrio vulnificus CMCP6 chromosome II, complete sequenceType IV secretory pathway, VirD4 component3e-60233
NC_008322:1186000:1186944118694411889171974Shewanella sp. MR-7, complete genomehypothetical protein6e-58225
NC_009787:17344:4718471869492232Escherichia coli E24377A plasmid pETEC_35, complete sequencetype IV conjugative transfer system coupling protein TraD9e-56218
NC_010793:1628500:164122816412281641572345Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD3e-51203
NC_007722:851129:8667998667998691382340Erythrobacter litoralis HTCC2594, complete genomeTraD4e-45183
NC_007722:168937:1869601869601892992340Erythrobacter litoralis HTCC2594, complete genomeTraD1e-42175
NC_009007:57804:7373273732760142283Rhodobacter sphaeroides 2.4.1 plasmid A, partial sequenceTraG1e-41171
NC_014819:25765:4626046260488752616Asticcacaulis excentricus CB 48 plasmid pASTEX02, completehypothetical protein3e-40167
NC_010793:30488:435634356343829267Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD6e-36152
NC_007722:2954876:2956825295682529590802256Erythrobacter litoralis HTCC2594, complete genomeTraD7e-36152
NC_015458:327009:3591473591473608261680Pusillimonas sp. T7-7 chromosome, complete genomeTrwB1e-32141
NC_011296:281930:2970702970702987821713Thermodesulfovibrio yellowstonii DSM 11347, complete genomeputative conjugative transfer protein TraD4e-31136
NC_011891:1225000:1245654124565412471831530Anaeromyxobacter dehalogenans 2CP-1, complete genometype IV secretion system protein VirD48e-31135
NC_012483:3672768:3674604367460436766042001Acidobacterium capsulatum ATCC 51196, complete genomehypothetical protein1e-29131
NC_010170:3908500:3929234392923439308801647Bordetella petrii, complete genometype IV secretion system protein VirD42e-29130
NC_011916:467106:4915124915124933291818Caulobacter crescentus NA1000 chromosome, complete genomeconjugation protein, ATP binding domain trwB2e-28127
NC_012483:3731542:3752837375283737548311995Acidobacterium capsulatum ATCC 51196, complete genomehypothetical protein1e-27125
NC_016631:3917253:3934403393440339363731971Granulicella mallensis MP5ACTX8 chromosome, complete genomeType IV secretion system, TraD, DNA-binding domain protein1e-26121
NC_016626:1751159:1754229175422917558721644Burkholderia sp. YI23 plasmid byi_1p, complete sequenceputative TraB protein, type IV secretion system2e-25117
NC_009484:2660048:2677156267715626790061851Acidiphilium cryptum JF-5 chromosome, complete genomeType IV secretory pathway VirD4 components-like protein2e-24114
NC_009488:1952640:196481019648101965070261Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein4e-24113
NC_009488:57889:710467104671246201Orientia tsutsugamushi str. Boryong, complete genome1e-23112
NC_009879:556000:566600566600566956357Rickettsia canadensis str. McKiel, complete genomePutative conjugative transfer protein TraD7e-2099.4
NC_017028:1030000:104246010424601042792333Candidatus Rickettsia amblyommii str. GAT-30V chromosome, completeconjugative transfer protein TraD9e-1892.4
NC_007404:1776147:1776147177614717785012355Thiobacillus denitrificans ATCC 25259, complete genomeputative type IV secretory pathway VirD4 components3e-1273.9
NC_010793:1628500:164157416415741641747174Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD2e-1171.6
NC_013722:3081459:3101807310180731035011695Xanthomonas albilineans, complete genomeputative type iv secretory pathway, conjugal transfer protein2e-0861.2
NC_013722:2810721:2835935283593528376291695Xanthomonas albilineans, complete genomeputative type iv secretory pathway, conjugal transfer protein5e-0860.1
NC_020453:3950838:3988683398868339904941812Agromonas oligotrophica S58 DNA, complete genomeputative type IV secretory pathway VirD4 components6e-0859.7
NC_009931:117904:1293991293991311741776Acaryochloris marina MBIC11017 plasmid pREB6, complete sequencehypothetical protein3e-0757.4
NC_011729:2732163:2747512274751227492211710Cyanothece sp. PCC 7424 chromosome, complete genometransfer complex protein TrsK-like protein1e-0655.5
NC_014414:2540189:2553515255351525553531839Parvularcula bermudensis HTCC2503 chromosome, complete genomeconjugal transfer protein traG5e-0653.5
NC_005295:21995:3116531165335702406Ehrlichia ruminantium str. Welgevonden, complete genometype IV secretion system protein VirD49e-0652.4
NC_006831:4500:1217012170145722403Ehrlichia ruminantium str. Gardel, complete genomePutative virD4 protein9e-0652.4