Pre_GI: BLASTN Hits

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Query: NC_009487:1097500 Staphylococcus aureus subsp. aureus JH9 chromosome, complete

Start: 1097500, End: 1118840, Length: 21341

Host Lineage: Staphylococcus aureus; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: A series of isogenic methicillin-resistant (MRSA) strains were isolated from a patient undergoing vancomycin treatment. Causes skin infections. Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is a major cause of nosocomial (hospital-acquired) and community-acquired infections. S. aureus continues to be a major cause of mortality and is responsible for a variety of infections including, boils, furuncles, styes, impetigo and other superficial skin infections in humans. Also known to cause more serious infections particularly in the chronically ill or immunocompromised. The ability to cause invasive disease is associated with persistance in the nasal cavity of a host.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007795:14663181466318148600719690Staphylococcus aureus subsp. aureus NCTC 8325, complete genome017450BLASTN svgBLASTP svg
NC_002952:15920001592000162211730118Staphylococcus aureus subsp. aureus MRSA252, complete genome017080BLASTN svgBLASTP svg
NC_010079:15643271564327160887644550Staphylococcus aureus subsp. aureus USA300_TCH1516, complete017060BLASTN svgBLASTP svg
NC_007793:15484771548477156806219586Staphylococcus aureus subsp. aureus USA300, complete genome017060BLASTN svgBLASTP svg
NC_003923:15335001533500155786524366Staphylococcus aureus subsp. aureus MW2, complete genome017040BLASTN svgBLASTP svg
NC_002951:35102935102938944738419Staphylococcus aureus subsp. aureus COL, complete genome07519BLASTN svgBLASTP svg
NC_002953:998944998944101716318220Staphylococcus aureus subsp. aureus MSSA476, complete genome07519BLASTN svgBLASTP svg
NC_020164:16774521677452171150734056Staphylococcus warneri SG1, complete genome01154BLASTN svgBLASTP svg
NC_014925:13145701314570133846423895Staphylococcus pseudintermedius HKU10-03 chromosome, complete3e-43184BLASTN svgBLASTP svg
NC_012121:47414447414450609331950Staphylococcus carnosus subsp. carnosus TM300, complete genome5e-32147BLASTN svgBLASTP svg
NC_007929:785875*78587581097825104Lactobacillus salivarius subsp. salivarius UCC118, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014551:86525486525490653841285Bacillus amyloliquefaciens DSM 7, complete genome1e-0560BLASTN svgBLASTP svg