Pre_GI: BLASTN Hits

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Query: NC_009482:485238 Synechococcus sp. RCC307 chromosome, complete genome

Start: 485238, End: 512439, Length: 27202

Host Lineage: Synechococcus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: Marine Synechococcus and Prochlorococcus are the most abundant photosynthetic organisms on earth and between them account for about half of the world's photosynthesis. RCC307 is an oceanic Synechococcus strain which presents great phylogenetic interest because trees obtained using its 16S RNA gene seem to indicate that it is rooted at the base of the radiation of marine cyanobacteria. This strain was isolated from seawater taken at a depth of 15 meters from the Mediterranean Sea.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_005071:288922*28892234134152420Prochlorococcus marinus str. MIT 9313, complete genome1e-85325BLASTN svgBLASTP svg
NC_008820:1818695*1818695185915440460Prochlorococcus marinus str. MIT 9303, complete genome3e-83317BLASTN svgBLASTP svg
NC_008319:61513561513563513920005Synechococcus sp. CC9311, complete genome6e-60240BLASTN svgBLASTP svg
NC_005070:1588419*1588419161715628738Synechococcus sp. WH 8102, complete genome4e-24121BLASTN svgBLASTP svg
NC_007513:1503955*1503955152946525511Synechococcus sp. CC9902, complete genome4e-21111BLASTN svgBLASTP svg
NC_014844:903877*90387792643122555Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome4e-18101BLASTN svgBLASTP svg
NC_006177:52005552005554053820484Symbiobacterium thermophilum IAM 14863, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_011080:27224922722492274217119680Salmonella enterica subsp. enterica serovar Newport str. SL254,2e-1695.6BLASTN svgBLASTP svg
NC_003197:27207262720726274079420069Salmonella typhimurium LT2, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_002696:1154996*1154996117718622191Caulobacter crescentus CB15, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_012912:12293331229333125280123469Dickeya zeae Ech1591, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_008319:635157*63515766109925943Synechococcus sp. CC9311, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_011769:34347443434744346368228939Desulfovibrio vulgaris str. 'Miyazaki F', complete genome5e-1177.8BLASTN svgBLASTP svg
NC_015859:1099919*1099919113350433586Corynebacterium variabile DSM 44702 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_007761:241900*24190026263520736Rhizobium etli CFN 42, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_018515:4148037*4148037416623318197Desulfosporosinus meridiei DSM 13257 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_016027:2387832*2387832241009922268Gluconacetobacter xylinus NBRC 3288, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014935:1223817*1223817126609942283Nitratifractor saLSUginis DSM 16511 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014323:4792048*4792048483609944052Herbaspirillum seropedicae SmR1 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014727:1292213*1292213132033528123Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,2e-0765.9BLASTN svgBLASTP svg
NC_007516:731193*73119375875727565Synechococcus sp. CC9605, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015581:10433941043394108183738444Thioalkalimicrobium cyclicum ALM1 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_006361:1547034*1547034157675929726Nocardia farcinica IFM 10152, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_021150:13220001322000135715735158Azotobacter vinelandii CA6, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012560:13220001322000135714535146Azotobacter vinelandii DJ, complete genome3e-0661.9BLASTN svgBLASTP svg