Query: NC_009482:485238 Synechococcus sp. RCC307 chromosome, complete genome
Start: 485238, End: 512439, Length: 27202
Host Lineage: Synechococcus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria
General Information: Marine Synechococcus and Prochlorococcus are the most abundant photosynthetic organisms on earth and between them account for about half of the world's photosynthesis. RCC307 is an oceanic Synechococcus strain which presents great phylogenetic interest because trees obtained using its 16S RNA gene seem to indicate that it is rooted at the base of the radiation of marine cyanobacteria. This strain was isolated from seawater taken at a depth of 15 meters from the Mediterranean Sea.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_005071:288922* | 288922 | 341341 | 52420 | Prochlorococcus marinus str. MIT 9313, complete genome | 1e-85 | 325 | BLASTN svg | BLASTP svg |
NC_008820:1818695* | 1818695 | 1859154 | 40460 | Prochlorococcus marinus str. MIT 9303, complete genome | 3e-83 | 317 | BLASTN svg | BLASTP svg |
NC_008319:615135 | 615135 | 635139 | 20005 | Synechococcus sp. CC9311, complete genome | 6e-60 | 240 | BLASTN svg | BLASTP svg |
NC_005070:1588419* | 1588419 | 1617156 | 28738 | Synechococcus sp. WH 8102, complete genome | 4e-24 | 121 | BLASTN svg | BLASTP svg |
NC_007513:1503955* | 1503955 | 1529465 | 25511 | Synechococcus sp. CC9902, complete genome | 4e-21 | 111 | BLASTN svg | BLASTP svg |
NC_014844:903877* | 903877 | 926431 | 22555 | Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome | 4e-18 | 101 | BLASTN svg | BLASTP svg |
NC_006177:520055 | 520055 | 540538 | 20484 | Symbiobacterium thermophilum IAM 14863, complete genome | 6e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_011080:2722492 | 2722492 | 2742171 | 19680 | Salmonella enterica subsp. enterica serovar Newport str. SL254, | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_003197:2720726 | 2720726 | 2740794 | 20069 | Salmonella typhimurium LT2, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_002696:1154996* | 1154996 | 1177186 | 22191 | Caulobacter crescentus CB15, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_012912:1229333 | 1229333 | 1252801 | 23469 | Dickeya zeae Ech1591, complete genome | 6e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_008319:635157* | 635157 | 661099 | 25943 | Synechococcus sp. CC9311, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_011769:3434744 | 3434744 | 3463682 | 28939 | Desulfovibrio vulgaris str. 'Miyazaki F', complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_015859:1099919* | 1099919 | 1133504 | 33586 | Corynebacterium variabile DSM 44702 chromosome, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_007761:241900* | 241900 | 262635 | 20736 | Rhizobium etli CFN 42, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_018515:4148037* | 4148037 | 4166233 | 18197 | Desulfosporosinus meridiei DSM 13257 chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_016027:2387832* | 2387832 | 2410099 | 22268 | Gluconacetobacter xylinus NBRC 3288, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_014935:1223817* | 1223817 | 1266099 | 42283 | Nitratifractor saLSUginis DSM 16511 chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_014323:4792048* | 4792048 | 4836099 | 44052 | Herbaspirillum seropedicae SmR1 chromosome, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_014727:1292213* | 1292213 | 1320335 | 28123 | Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome, | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_007516:731193* | 731193 | 758757 | 27565 | Synechococcus sp. CC9605, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_015581:1043394 | 1043394 | 1081837 | 38444 | Thioalkalimicrobium cyclicum ALM1 chromosome, complete genome | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_006361:1547034* | 1547034 | 1576759 | 29726 | Nocardia farcinica IFM 10152, complete genome | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_021150:1322000 | 1322000 | 1357157 | 35158 | Azotobacter vinelandii CA6, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_012560:1322000 | 1322000 | 1357145 | 35146 | Azotobacter vinelandii DJ, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |