Pre_GI: BLASTN Hits

Some Help

Query: NC_009482:1718000 Synechococcus sp. RCC307 chromosome, complete genome

Start: 1718000, End: 1740777, Length: 22778

Host Lineage: Synechococcus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: Marine Synechococcus and Prochlorococcus are the most abundant photosynthetic organisms on earth and between them account for about half of the world's photosynthesis. RCC307 is an oceanic Synechococcus strain which presents great phylogenetic interest because trees obtained using its 16S RNA gene seem to indicate that it is rooted at the base of the radiation of marine cyanobacteria. This strain was isolated from seawater taken at a depth of 15 meters from the Mediterranean Sea.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_005071:988815*988815100778518971Prochlorococcus marinus str. MIT 9313, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_008319:1950889*1950889197599225104Synechococcus sp. CC9311, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_007513:942500*94250098279040291Synechococcus sp. CC9902, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_008319:16014941601494162186920376Synechococcus sp. CC9311, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_007516:24202642420264244528825025Synechococcus sp. CC9605, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008319:11190761119076114075821683Synechococcus sp. CC9311, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_007516:53250053250055441121912Synechococcus sp. CC9605, complete genome7e-0763.9BLASTN svgBLASTP svg