Pre_GI: BLASTP Hits

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Query: NC_009482:1718000:1738799 Synechococcus sp. RCC307 chromosome, complete genome

Start: 1738799, End: 1739746, Length: 948

Host Lineage: Synechococcus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: Marine Synechococcus and Prochlorococcus are the most abundant photosynthetic organisms on earth and between them account for about half of the world's photosynthesis. RCC307 is an oceanic Synechococcus strain which presents great phylogenetic interest because trees obtained using its 16S RNA gene seem to indicate that it is rooted at the base of the radiation of marine cyanobacteria. This strain was isolated from seawater taken at a depth of 15 meters from the Mediterranean Sea.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008319:1950889:196094019609401961896957Synechococcus sp. CC9311, complete genometranscriptional regulator, araC family domain protein1e-123442
NC_007513:1503955:151547915154791516435957Synechococcus sp. CC9902, complete genometranscriptional regulator, AraC family2e-121435
NC_008319:1950889:1961893196189319629271035Synechococcus sp. CC9311, complete genomehypothetical protein3e-28125
NC_009482:1718000:1739746173974617407771032Synechococcus sp. RCC307 chromosome, complete genomeAraC-type DNA-binding domain-containing protein1e-24113
NC_007513:1503955:1514451151445115154791029Synechococcus sp. CC9902, complete genomehypothetical protein2e-24113
NC_017986:4790482:481891148189114819822912Pseudomonas putida ND6 chromosome, complete genomeputative AraC family transcriptional regulator2e-0860.1
NC_012721:2556160:2556160255616025571941035Burkholderia glumae BGR1 chromosome 2, complete genomeTranscriptional regulator, AraC family protein2e-0860.1
NC_008392:1029134:1032894103289410339191026Burkholderia cepacia AMMD chromosome 3, complete sequencetranscriptional regulator, AraC family2e-0860.1
NC_008545:115292:1348071348071358141008Burkholderia cenocepacia HI2424 plasmid 1, complete sequencetranscriptional regulator, AraC family4e-0859.3
NC_008061:2153495:2153495215349521545021008Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetranscriptional regulator, AraC family4e-0858.9
NC_010557:679656:7013457013457023731029Burkholderia ambifaria MC40-6 chromosome 3, complete sequencetranscriptional regulator, AraC family1e-0757.4
NC_002678:5714000:573007257300725730971900Mesorhizobium loti MAFF303099, complete genometranscriptional regulator2e-0757
NC_015726:2177783:218982021898202190776957Cupriavidus necator N-1 chromosome 1, complete sequenceAraC family transcriptional regulator7e-0755.1
NC_008258:2542863:2543768254376825448201053Shigella flexneri 5 str. 8401, complete genomeputative ARAC-type regulatory protein1e-0654.3
NC_010468:1343228:1361194136119413622461053Escherichia coli ATCC 8739, complete genometranscriptional regulator, AraC family2e-0653.5
NC_017328:2586171:258770325877032588329627Shigella flexneri 2002017 chromosome, complete genomeEthanolamine operon regulatory protein2e-0653.1
NC_007298:1418500:145904814590481460040993Dechloromonas aromatica RCB, complete genomeHelix-turn-helix, AraC type2e-0653.1
NC_007951:3655088:365508836550883656071984Burkholderia xenovorans LB400 chromosome 1, complete sequenceTranscriptional regulator, AraC family3e-0653.1
NC_010170:1580832:158669015866901587673984Bordetella petrii, complete genometranscriptional regulator, AraC family3e-0653.1
NC_004741:2526421:252820025282002528760561Shigella flexneri 2a str. 2457T, complete genomeputative ARAC-type regulatory protein3e-0652.8