Pre_GI: BLASTP Hits

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Query: NC_009480:99640:119184 Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete

Start: 119184, End: 119501, Length: 318

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Phytopathogen that causes bacterial wilt and canker of tomato (Lycopersicon esculentum). This is considered to be the most important bacterial disease of tomato causing substantial economic losses worldwide. Bacteria enter the plant by wounds on root or stem and then find their way into the xylem allowing a massive systemic colonization. The first stage of the disease is characterized by unilateral wilting of leaves. Wilting then spreads to all leaves, canker lesions develop on the stem and the plant dies. If infection occurs at a late stage of plant development, plants can survive and yield fruit that may have spots, so called bird's eyes. Often the seeds will be infected and this has been the major source for outbreaks of Clavibacter michiganensis subsp. michiganensis infections in agriculture. Members of the Clavibacter genus are known to produce antimicrobial compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014659:3654979:367855936785593678825267Rhodococcus equi 103S, complete genomehypothetical protein1e-1994.7
NC_016887:1714664:175813917581391758408270Nocardia cyriacigeorgica GUH-2, complete genomehypothetical protein3e-1994
NC_016887:3255500:326898432689843269253270Nocardia cyriacigeorgica GUH-2, complete genomehypothetical protein5e-1993.2
NC_014151:370882:392199392199392471273Cellulomonas flavigena DSM 20109 chromosome, complete genomeprotein of unknown function DUF1561e-1892
NC_004369:41236:591545915459411258Corynebacterium efficiens YS-314, complete genomehypothetical protein1e-1891.7
NC_008712:250240:251886251886252143258Arthrobacter aurescens TC1 plasmid TC1, complete sequenceputative protein of unknown function1e-1788.6
NC_013929:8474195:849384984938498494139291Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein3e-1787.4
NC_016943:1560000:158039115803911580657267Blastococcus saxobsidens DD2, complete genomehypothetical protein3e-1477
NC_009725:496443:523350523350523610261Bacillus amyloliquefaciens FZB42, complete genomeYrkD2e-1167.8
NC_019842:484933:517338517338517598261Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,copper-sensing transcriptional repressor CsoR2e-1167.8
NC_014976:684000:697813697813698073261Bacillus subtilis BSn5 chromosome, complete genomeYrkD2e-1167.4
NC_009848:161373:182508182508182768261Bacillus pumilus SAFR-032, complete genomehypothetical protein7e-1165.9
NC_006274:765870:776557776557776820264Bacillus cereus E33L, complete genomehypothetical protein3e-1063.9
NC_017208:823540:833452833452833715264Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeputative cytoplasmic protein3e-1063.9
NC_006510:2110430:211258321125832112843261Geobacillus kaustophilus HTA426, complete genomehypothetical protein3e-1063.9
NC_009328:2083386:210245421024542102741288Geobacillus thermodenitrificans NG80-2 chromosome, complete genomehypothetical protein3e-1063.9
NC_014206:1497942:152023615202361520496261Geobacillus sp. C56-T3 chromosome, complete genomehypothetical protein4e-1063.5
NC_013411:2951559:295489529548952955155261Geobacillus sp. Y412MC61, complete genomeprotein of unknown function DUF1564e-1063.5
NC_014915:2092678:209482720948272095087261Geobacillus sp. Y412MC52 chromosome, complete genomeprotein of unknown function DUF1564e-1063.5
NC_013172:3141739:315772831577283158090363Brachybacterium faecium DSM 4810, complete genomehypothetical protein5e-0856.6
NC_019897:4014485:403032240303224030588267Thermobacillus composti KWC4 chromosome, complete genomehypothetical protein9e-0855.8
NC_002951:49535:559815598156241261Staphylococcus aureus subsp. aureus COL, complete genomehypothetical protein4e-0753.5
NC_007759:2179000:220662622066262207021396Syntrophus aciditrophicus SB, complete genomehypothetical cytosolic protein1e-0652
NC_015172:1255956:126606912660691266359291Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeprotein of unknown function DUF1564e-0650.4
NC_014388:55903:600956009560430336Butyrivibrio proteoclasticus B316 chromosome 2, complete genomehypothetical protein4e-0650.1
NC_008528:331260:342633342633342902270Oenococcus oeni PSU-1, complete genomehypothetical protein, nickel resistance determinant7e-0649.3