Pre_GI: BLASTP Hits

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Query: NC_009480:2580429:2580429 Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete

Start: 2580429, End: 2581325, Length: 897

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Phytopathogen that causes bacterial wilt and canker of tomato (Lycopersicon esculentum). This is considered to be the most important bacterial disease of tomato causing substantial economic losses worldwide. Bacteria enter the plant by wounds on root or stem and then find their way into the xylem allowing a massive systemic colonization. The first stage of the disease is characterized by unilateral wilting of leaves. Wilting then spreads to all leaves, canker lesions develop on the stem and the plant dies. If infection occurs at a late stage of plant development, plants can survive and yield fruit that may have spots, so called bird's eyes. Often the seeds will be infected and this has been the major source for outbreaks of Clavibacter michiganensis subsp. michiganensis infections in agriculture. Members of the Clavibacter genus are known to produce antimicrobial compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015953:2603526:260352626035262604431906Streptomyces sp. SirexAA-E chromosome, complete genomeLysR family transcriptional regulator9e-58223
NC_014550:7560:177491774918633885Arthrobacter arilaitensis Re117, complete genomelysine export transcriptional regulatory protein LysG2e-51202
NC_010943:1426885:145597214559721456868897Stenotrophomonas maltophilia K279a, complete genomeputative LysR family TRANSCRIPTIONAL REGULATORY PROTEIN2e-47189
NC_012917:2362725:238420523842052385104900Pectobacterium carotovorum subsp. carotovorum PC1, complete genometranscriptional regulator, ArgP, LysR family3e-47189
NC_015947:1290614:131205113120511312944894Burkholderia sp. JV3 chromosome, complete genomeLysR family transcriptional regulator ArgP4e-47188
NC_009075:15017:431024310243995894Burkholderia pseudomallei 668 chromosome II, complete sequenceTranscriptional regulator6e-47187
NC_015563:4414854:443300544330054433910906Delftia sp. Cs1-4 chromosome, complete genometranscriptional regulator ArgP6e-44177
NC_003902:3514000:351545935154593516376918Xanthomonas campestris pv. campestris str. ATCC 33913, completechromosome replication initiation inhibitor protein1e-42173
NC_009937:4350132:435642343564234357316894Azorhizobium caulinodans ORS 571, complete genometranscriptional regulator6e-41167
NC_010524:933191:943524943524944378855Leptothrix cholodnii SP-6, complete genometranscriptional regulator, LysR family4e-39161
NC_012803:2195808:223996322399632240838876Micrococcus luteus NCTC 2665, complete genometranscriptional regulator2e-35149
NC_010524:1005355:100965410096541010589936Leptothrix cholodnii SP-6, complete genometranscriptional regulator, LysR family9e-34144
NC_008740:1484531:151373115137311514603873Marinobacter aquaeolei VT8, complete genometranscriptional regulator, LysR family2e-33142
NC_012982:2415237:243643924364392437323885Hirschia baltica ATCC 49814, complete genometranscriptional regulator, ArgP, LysR family4e-33142
NC_010676:2793237:280280828028082803740933Burkholderia phytofirmans PsJN chromosome 2, complete sequencetranscriptional regulator, LysR family3e-32139
NC_010623:72500:763497634977254906Burkholderia phymatum STM815 chromosome 2, complete sequencetranscriptional regulator, LysR family3e-31135
NC_015136:2282488:231933023193302320274945Burkholderia sp. CCGE1001 chromosome 1, complete sequenceLysR family transcriptional regulator ArgP2e-30133
NC_007951:1971584:198313919831391984071933Burkholderia xenovorans LB400 chromosome 1, complete sequenceTranscriptional regulator, LysR family1e-29130
NC_015136:2282488:228305222830522283975924Burkholderia sp. CCGE1001 chromosome 1, complete sequenceLysR family transcriptional regulator ArgP5e-29128
NC_012668:83641:106939106939107835897Vibrio cholerae MJ-1236 chromosome 1, complete sequencechromosome replication initiation inhibitor protein1e-28126
NC_015224:889536:902624902624903517894Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,chromosome replication initiation inhibitor protein1e-26120
NC_009654:3980289:398028939802893981167879Marinomonas sp. MWYL1, complete genomeLysR family transcriptional regulator3e-26119
NC_008253:334467:342718342718343605888Escherichia coli 536, complete genomeputative LysR-family transcriptional regulator3e-22105
NC_015379:3175500:318748831874883188384897Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative transcriptional regulator protein, LysR family4e-0755.5
NC_010002:4256651:428130742813074282257951Delftia acidovorans SPH-1, complete genometranscriptional regulator, LysR family1e-0551.2