Pre_GI: BLASTP Hits

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Query: NC_009464:2523092:2549177 Uncultured methanogenic archaeon RC-I, complete genome

Start: 2549177, End: 2549650, Length: 474

Host Lineage: Methanocella arvoryzae; Methanocella; Methanocellaceae; Methanocellales; Euryarchaeota; Archaea

General Information: This organism is a key methane producer in the rhizome of rice. A large portion of the methane that is emitted in rice fields is produced by methanogenic archaea. Rice Cluster I (RC-I) methanogens in the rice rhizosphere play a key role in this methane production.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011832:2527183:254524125452412545717477Candidatus Methanosphaerula palustris E1-9c, complete genomedTDP-4-dehydrorhamnose 3,5 epimerase4e-78289
NC_009051:165102:167803167803168279477Methanoculleus marisnigri JR1, complete genomedTDP-4-dehydrorhamnose 3,5-epimerase3e-77286
NC_013158:2170083:218840021884002188867468Halorhabdus utahensis DSM 12940, complete genomedTDP-4-dehydrorhamnose 3,5-epimerase2e-32137
NC_007644:161222:166469166469166924456Moorella thermoacetica ATCC 39073, complete genomedTDP-4-dehydrorhamnose 3,5-epimerase related2e-31134
NC_014735:199434:206435206435206905471Halogeometricum borinquense DSM 11551 plasmid pHBOR01, completedTDP-4-dehydrorhamnose 3,5-epimerase-like enzyme3e-29127
NC_013202:1144192:115678411567841157248465Halomicrobium mukohataei DSM 12286, complete genomedTDP-4-dehydrorhamnose 3,5-epimerase and related enzyme4e-29127
NC_013967:1878045:190545019054501905920471Haloferax volcanii DS2 chromosome, complete genomespore coat polysaccharide synthesis spsK4e-29126
NC_015955:581685:596565596565597035471Halophilic archaeon DL31 plasmid phalar01, complete sequencespore coat polysaccharide synthesis SpsK7e-29125
NC_009725:3602632:361386036138603614321462Bacillus amyloliquefaciens FZB42, complete genomeSpsL6e-27119
NC_007955:1664998:168456316845631685000438Methanococcoides burtonii DSM 6242, complete genomedTDP-4-dehydrorhamnose epimerase8e-2199.4
NC_007503:861668:864609864609865085477Carboxydothermus hydrogenoformans Z-2901, complete genomedTDP-4-dehydrorhamnose 3,5-epimerase1e-1995.5
NC_015320:470988:475353475353475850498Archaeoglobus veneficus SNP6 chromosome, complete genomeCupin 2 barrel domain-containing protein4e-1994
NC_007954:3171081:318704431870443187472429Shewanella denitrificans OS217, complete genomehypothetical protein5e-1580.1
NC_014098:850000:856903856903857469567Bacillus tusciae DSM 2912 chromosome, complete genomeputative dTDP-4-dehydrorhamnose 3,5-epimerase3e-1477.8
NC_014212:2776457:279761227976122798142531Meiothermus silvanus DSM 9946 chromosome, complete genomedTDP-4-dehydrorhamnose 35-epimerase related protein1e-1272
NC_001264:28266:476264762648174549Deinococcus radiodurans R1 chromosome 2, complete sequencelipopolysaccharide biosynthesis protein, putative1e-1272
NC_013946:2050871:206956820695682069981414Meiothermus ruber DSM 1279 chromosome, complete genomedTDP-4-dehydrorhamnose 3 5-epimerase7e-1166.2
NC_017275:568722:586369586369586899531Sulfolobus islandicus HVE10/4 chromosome, complete genomedTDP-4-dehydrorhamnose 3,5-epimerase4e-1063.5
NC_013769:961072:969099969099969635537Sulfolobus islandicus L.D.8.5 chromosome, complete genomedTDP-4-dehydrorhamnose 3,5-epimerase7e-1063.2
NC_007908:1328832:134602013460201346445426Rhodoferax ferrireducens T118, complete genomehypothetical protein9e-1062.8
NC_013860:171235:180818180818181234417Azospirillum sp. B510 plasmid pAB510f, complete sequencedTDP-4-dehydrorhamnose epimerase1e-0962.4
NC_014220:170021:1767801767801778951116Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeNAD-dependent epimerase/dehydratase1e-0962.4
NC_015931:618445:629462629462630025564Pyrolobus fumarii 1A, complete genomedTDP-4-dehydrorhamnose 3,5-epimerase4e-0960.5
NC_011060:514874:5462265462265473441119Pelodictyon phaeoclathratiforme BU-1, complete genomeNAD-dependent epimerase/dehydratase6e-0960.1
NC_015185:1352171:136422513642251364803579Desulfurobacterium thermolithotrophum DSM 11699 chromosome,dTDP-4-dehydrorhamnose 3,5-epimerase7e-0959.7
NC_010525:421769:432183432183432746564Thermoproteus neutrophilus V24Sta, complete genomedTDP-4-dehydrorhamnose 3,5-epimerase7e-0959.7
NC_011753:206178:223645223645224193549Vibrio splendidus LGP32 chromosome 1, complete genomedTDP-4-dehydrorhamnose 3,5-epimerase7e-0959.7
NC_009614:3081190:308716130871613087733573Bacteroides vulgatus ATCC 8482 chromosome, complete genomedTDP-4-dehydrorhamnose 3,5-epimerase8e-0959.7
NC_012623:2173696:218170221817022182238537Sulfolobus islandicus Y.N.15.51 chromosome, complete genomedTDP-4-dehydrorhamnose 3,5-epimerase1e-0859.3
NC_012660:1804610:1820398182039818215251128Pseudomonas fluorescens SBW25 chromosome, complete genomeNAD dependent epimerase/dehydratase8e-0959.3
NC_002754:705741:714739714739715269531Sulfolobus solfataricus P2, complete genomedTDP-4-dehydrorhamnose 3,5 epimerase (rfbC-1)2e-0858.2
NC_015732:529201:5693055693055704171113Spirochaeta caldaria DSM 7334 chromosome, complete genomeNAD-dependent epimerase/dehydratase5e-0857
NC_018604:128113:140255140255140788534Brachyspira pilosicoli WesB complete genomedTDP-4-dehydrorhamnose 3,5-epimerase6e-0856.6
NC_016745:2785346:2792885279288527940031119Oceanimonas sp. GK1 chromosome, complete genomeNAD-dependent epimerase/dehydratase5e-0856.6
NC_015160:3585354:360280036028003603372573Odoribacter splanchnicus DSM 20712 chromosome, complete genomedTDP-4-dehydrorhamnose 3,5-epimerase5e-0856.6
NC_015958:815442:822722822722823279558Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomedTDP-4-dehydrorhamnose 3,5-epimerase1e-0755.8
NC_010939:1633000:164223916422391642781543Actinobacillus pleuropneumoniae serovar 7 str. AP76, completedTDP-4-dehydrorhamnose 3,5-epimerase2e-0755.5
NC_018868:569423:600124600124600672549Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeprotein RfbC22e-0755.1
NC_008553:1038344:104025010402501040813564Methanosaeta thermophila PT, complete genomedTDP-4-dehydrorhamnose 3,5-epimerase2e-0755.1
NC_014804:1856388:186285518628551863412558Thermococcus barophilus MP chromosome, complete genomedTDP-4-dehydrorhamnose 3,5-epimerase2e-0755.1
NC_014541:1165991:118267111826711183216546Ferrimonas balearica DSM 9799 chromosome, complete genomedTDP-4-dehydrorhamnose 3,5-epimerase2e-0755.1
NC_018604:128113:140805140805141338534Brachyspira pilosicoli WesB complete genomedTDP-4-dehydrorhamnose 3,5-epimerase2e-0754.7
NC_014829:3964616:396892239689223969602681Bacillus cellulosilyticus DSM 2522 chromosome, complete genomedTDP-4-dehydrorhamnose 3,5-epimerase2e-0754.7
NC_009656:1994392:2021096202109620222171122Pseudomonas aeruginosa PA7 chromosome, complete genomeprotein WbjC2e-0754.7
NC_015145:2693749:2715978271597827170691092Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomedTDP-4-dehydrorhamnose 3,5-epimerase-like enzyme2e-0754.7
NC_015680:1562535:158442815844281584985558Pyrococcus yayanosii CH1 chromosome, complete genomedTDP-4-dehydrorhamnose 3,5-epimerase3e-0754.3
NC_014935:1389000:140738214073821407957576Nitratifractor saLSUginis DSM 16511 chromosome, complete genomedtdp-4-dehydrorhamnose 3,5-epimerase3e-0754.3
NC_018678:3953809:395761739576173958162546Alteromonas macleodii str. 'English Channel 673' chromosome,dTDP-4-keto-6-deoxy-D-glucose-3,6-epimerase3e-0754.3
NC_010322:1520973:1536073153607315371911119Pseudomonas putida GB-1 chromosome, complete genomeNAD-dependent epimerase/dehydratase5e-0753.5
NC_014171:5068500:508743950874395087999561Bacillus thuringiensis BMB171 chromosome, complete genomeglucose-1-phosphate thymidylyltransferase5e-0753.5
NC_000961:372000:378735378735379301567Pyrococcus horikoshii OT3, complete genomedTDP-4-dehydrorhamnose 3,5-epimerase6e-0753.1
NC_014364:667841:715161715161715703543Spirochaeta smaragdinae DSM 11293 chromosome, complete genomedTDP-4-dehydrorhamnose 3,5-epimerase7e-0753.1
NC_014364:4578408:458712545871254587682558Spirochaeta smaragdinae DSM 11293 chromosome, complete genomedTDP-4-dehydrorhamnose 3,5-epimerase7e-0753.1
NC_000868:1130944:113572311357231136280558Pyrococcus abyssi GE5, complete genomedtdp-4-dehydrorhamnose 3,5-epimerase1e-0652.8
NC_011978:15059:264262642626992567Thermotoga neapolitana DSM 4359, complete genomePutative dTDP-6-deoxy-D-glucose-3,5-epimerase9e-0752.8
NC_008027:1559083:1576865157686515779801116Pseudomonas entomophila L48, complete genomenucleoside-diphosphate-sugar epimerase WbjC9e-0752.8
NC_014151:813755:8292318292318303251095Cellulomonas flavigena DSM 20109 chromosome, complete genomeNAD-dependent epimerase/dehydratase9e-0752.8
NC_015152:389500:413701413701414243543Spirochaeta sp. Buddy chromosome, complete genomedTDP-4-dehydrorhamnose 3,5-epimerase9e-0752.8
NC_011663:1709003:1728016172801617291191104Shewanella baltica OS223 chromosome, complete genomeNAD-dependent epimerase/dehydratase8e-0752.8
NC_009253:3272000:329684832968483297408561Desulfotomaculum reducens MI-1 chromosome, complete genomedTDP-4-dehydrorhamnose 3,5-epimerase1e-0652.4
NC_009655:866281:892383892383892925543Actinobacillus succinogenes 130Z chromosome, complete genomedTDP-4-dehydrorhamnose 3,5-epimerase1e-0652.4
NC_012691:2225000:222627922262792226827549Tolumonas auensis DSM 9187, complete genomedTDP-4-dehydrorhamnose 3,5-epimerase1e-0652.4
NC_017954:161787:164585164585165145561Thermogladius cellulolyticus 1633 chromosome, complete genomedTDP-4-dehydrorhamnose 3,5-epimerase1e-0652
NC_012883:1817358:183123218312321831789558Thermococcus sibiricus MM 739, complete genomeRfbC dTDP-4-dehydrorhamnose 3,5-epimerase1e-0652
NC_009138:1138917:115546511554651155893429Herminiimonas arsenicoxydans, complete genomehypothetical protein1e-0652
NC_014205:842314:870005870005870562558Staphylothermus hellenicus DSM 12710 chromosome, complete genomedTDP-4-dehydrorhamnose 3,5-epimerase1e-0652
NC_017187:1683619:170327017032701703845576Arcobacter butzleri ED-1, complete genomedTDP-4-dehydrorhamnose 3,5-epimerase2e-0652
NC_017095:119361:1193611193611204701110Fervidobacterium pennivorans DSM 9078 chromosome, complete genomeWxcM-like protein,NAD dependent epimerase/dehydratase family protein2e-0651.6
NC_014640:6745873:6764312676431267654181107Achromobacter xylosoxidans A8 chromosome, complete genomeNAD dependent epimerase/dehydratase family protein 62e-0651.2
NC_010424:1778459:178142917814291782001573Candidatus Desulforudis audaxviator MP104C, complete genomedTDP-4-dehydrorhamnose 3,5-epimerase3e-0651.2
NC_013716:2255102:227024822702482270796549Citrobacter rodentium ICC168, complete genomedTDP-4-dehydrorhamnose 3,5-epimerase3e-0651.2
NC_016641:834500:840891840891841439549Paenibacillus terrae HPL-003 chromosome, complete genomeglucose-1-phosphate thymidylyltransferase3e-0650.8
NC_013416:1621469:163685816368581637400543Aggregatibacter actinomycetemcomitans D11S-1, complete genomehypothetical protein4e-0650.4
NC_015660:296488:318612318612319163552Geobacillus thermoglucosidasius C56-YS93 chromosome, completedTDP-4-dehydrorhamnose 3,5-epimerase5e-0650.1
NC_011529:1722829:172878717287871729344558Thermococcus onnurineus NA1, complete genomehypothetical dTDP-4-dehydrorhamnose 3,5-epimerase5e-0650.1
NC_015172:2628128:267153026715302672078549Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomedTDP-4-dehydrorhamnose 3,5-epimerase5e-0650.1
NC_012108:2874831:288250428825042883052549Desulfobacterium autotrophicum HRM2, complete genomeRfbC28e-0649.7
NC_008340:2614000:262994326299432630491549Alkalilimnicola ehrlichei MLHE-1, complete genomedTDP-4-dehydrorhamnose 3,5-epimerase1e-0549.3