Pre_GI: BLASTP Hits

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Query: NC_009456:787322:864958 Vibrio cholerae O395 chromosome 1, complete sequence

Start: 864958, End: 865884, Length: 927

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Aquatic organism that causes Cholera. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012583:361241:398058398058398984927Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein1e-175615
NC_018000:4958637:498841749884174989364948Sinorhizobium fredii USDA 257 chromosome, complete genomehypothetical protein5e-22105
NC_009997:2352948:237745623774562377671216Shewanella baltica OS195, complete genomehypothetical protein1e-0654.3