Pre_GI: BLASTP Hits

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Query: NC_009456:787322:843259 Vibrio cholerae O395 chromosome 1, complete sequence

Start: 843259, End: 844116, Length: 858

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Aquatic organism that causes Cholera. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016945:370471:408359408359409216858Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein2e-154545
NC_012667:931390:976851976851977708858Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein2e-154545
NC_012583:361241:419826419826420683858Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein2e-154545
NC_002506:370629:408539408539409396858Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein2e-154545
NC_009512:755658:766285766285767151867Pseudomonas putida F1, complete genomehypothetical protein2e-28126
NC_004460:1237129:1251659125165912527531095Vibrio vulnificus CMCP6 chromosome II, complete sequenceMembrane-fusion protein3e-1582.8
NC_016048:4047922:406803840680384068883846Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein3e-1479.3
NC_017243:58000:602136021361208996Brachyspira intermedia PWS/A chromosome, complete genomemembrane-fusion protein1e-1377
NC_017047:4037674:4050409405040940514371029Rahnella aquatilis HX2 chromosome, complete genomemembrane-fusion protein4e-1168.6