Pre_GI: BLASTP Hits

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Query: NC_009456:557962:569960 Vibrio cholerae O395 chromosome 1, complete sequence

Start: 569960, End: 570547, Length: 588

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Aquatic organism that causes Cholera. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012583:683887:693395693395693982588Vibrio cholerae O395 chromosome chromosome II, complete sequenceDamX-related protein5e-104376
NC_012667:839318:849216849216849791576Vibrio cholerae MJ-1236 chromosome 2, complete genomeDamX-related protein8e-102369
NC_016628:193000:217771217771218283513Vibrio furnissii NCTC 11218 chromosome 2, complete sequenceDamX-like protein2e-73274
NC_005140:883857:886760886760887335576Vibrio vulnificus YJ016 chromosome II, complete sequencehypothetical protein1e-56219