Pre_GI: BLASTP Hits

Some Help

Query: NC_009456:557962:561184 Vibrio cholerae O395 chromosome 1, complete sequence

Start: 561184, End: 561519, Length: 336

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Aquatic organism that causes Cholera. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012667:839318:858206858206858550345Vibrio cholerae MJ-1236 chromosome 2, complete genomecryptic phage CTXphi transcriptional repressor RstR9e-58221
NC_012583:683887:702423702423702758336Vibrio cholerae O395 chromosome chromosome II, complete sequencecryptic phage CTXphi transcriptional repressor RstR, classical1e-57221
NC_014551:576000:577723577723578103381Bacillus amyloliquefaciens DSM 7, complete genomehypothetical protein1e-0961.6
NC_009012:2927793:293408629340862934514429Clostridium thermocellum ATCC 27405, complete genometranscriptional regulator, XRE family5e-0959.7
NC_017025:1651870:166594816659481666286339Flavobacterium indicum GPTSA100-9, complete genometranscriptional regulator, XRE family8e-0855.8
NC_017068:2827568:284872528487252849108384Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative Xre family transcriptional regulator3e-0753.5
NC_015635:4097711:409942740994274099657231Microlunatus phosphovorus NM-1, complete genomeputative Xre family DNA binding protein5e-0753.1
NC_008024:548165:548165548165548914750Streptococcus pyogenes MGAS10750, complete genomephage transcriptional repressor5e-0753.1
NC_008021:531730:531730531730532479750Streptococcus pyogenes MGAS9429, complete genomephage transcriptional repressor5e-0753.1
NC_016510:2312481:232574323257432326075333Flavobacterium columnare ATCC 49512 chromosome, complete genomehelix-turN-helix domain protein5e-0753.1
NC_013385:90331:106210106210106566357Ammonifex degensii KC4, complete genometranscriptional regulator, XRE family8e-0752.4
NC_015416:1832759:184216318421631842387225Methanosaeta concilii GP-6 chromosome, complete genomehypothetical protein9e-0752.4
NC_006624:1178243:118165711816571181854198Thermococcus kodakarensis KOD1, complete genomepredicted transcription regulator, containing DNA-binding HTH domain1e-0652
NC_002505:1550108:156602715660271566365339Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completetranscriptional repressor RstR1e-0651.6
NC_002505:1550108:157294315729431573281339Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completetranscriptional repressor RstR1e-0651.6
NC_016445:1027143:104721810472181047556339Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completetranscriptional repressor RstR1e-0651.6
NC_016445:1027143:104994310499431050281339Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completetranscriptional repressor RstR1e-0651.6
NC_016944:1547176:156305615630561563394339Vibrio cholerae IEC224 chromosome I, complete sequencetranscriptional repressor RstR1e-0651.6
NC_016944:1547176:156996915699691570307339Vibrio cholerae IEC224 chromosome I, complete sequencetranscriptional repressor RstR1e-0651.6
NC_002737:780857:780857780857781603747Streptococcus pyogenes M1 GAS, complete genomeputative repressor protein - phage associated2e-0651.2
NC_012962:1068102:108946510894651089866402Photorhabdus asymbiotica, complete genomeputative phage regulator3e-0650.8
NC_012962:1068102:109723810972381097639402Photorhabdus asymbiotica, complete genomeputative phage regulator3e-0650.8
NC_014538:2158131:218091821809182181331414Thermoanaerobacter sp. X513 chromosome, complete genomehelix-turn-helix domain-containing protein2e-0650.8
NC_016051:389776:408848408848409045198Thermococcus sp. AM4 chromosome, complete genomehypothetical protein4e-0650.1
NC_016052:842762:846086846086846415330Tetragenococcus halophilus NBRC 12172, complete genomeputative Xre family DNA-binding protein8e-0649.3
NC_005126:4333767:434657743465774346915339Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein9e-0648.9
NC_005126:1613818:162726016272601627598339Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein9e-0648.9
NC_005126:4333767:435394543539454354283339Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein9e-0648.9
NC_005126:1265071:130947513094751309813339Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein9e-0648.9