Pre_GI: BLASTP Hits

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Query: NC_009456:557962:557962 Vibrio cholerae O395 chromosome 1, complete sequence

Start: 557962, End: 558852, Length: 891

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Aquatic organism that causes Cholera. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012583:683887:705090705090705980891Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein6e-164576
NC_012667:839318:860882860882861766885Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein7e-163573
NC_016628:193000:198409198409199287879Vibrio furnissii NCTC 11218 chromosome 2, complete sequencehypothetical protein3e-109394
NC_005140:883857:900968900968901849882Vibrio vulnificus YJ016 chromosome II, complete sequencehypothetical protein6e-75281
NC_014966:919442:931303931303932184882Vibrio vulnificus MO6-24/O chromosome II, complete sequencecopper-sensing two-component system response regulator CusR7e-75280
NC_013457:140474:145669145669146550882Vibrio sp. Ex25 chromosome 2, complete genomehypothetical protein1e-72273