Pre_GI: BLASTP Hits

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Query: NC_009455:173374:193972 Dehalococcoides sp. BAV1 chromosome, complete genome

Start: 193972, End: 195231, Length: 1260

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013890:53538:7958779587808461260Dehalococcoides sp. GT chromosome, complete genomeDNA polymerase III beta chain0726
NC_013890:191616:1987031987031999621260Dehalococcoides sp. GT chromosome, complete genomeDNA polymerase III beta chain0726
NC_014314:1148000:1165196116519611664551260Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeDNA polymerase III subunit beta0726
NC_002936:149100:1542451542451555221278Dehalococcoides ethenogenes 195, complete genomeDNA polymerase domain protein1e-104380
NC_014363:2035141:2044311204431120454141104Olsenella uli DSM 7084 chromosome, complete genomeDNA polymerase III, beta subunit8e-1582
NC_011297:1357947:1377443137744313785461104Dictyoglomus thermophilum H-6-12, complete genomeDNA polymerase III, beta subunit9e-1581.6
NC_015422:1:1652165227581107Alicycliphilus denitrificans K601 chromosome, complete genomeDNA polymerase III subunit beta3e-1480.1
NC_015677:1:1501150126071107Ramlibacter tataouinensis TTB310 chromosome, complete genomeDNA polymerase III sliding clamp subunit4e-1376.3
NC_013170:1:1872187229691098Cryptobacterium curtum DSM 15641, complete genomeDNA polymerase III, beta subunit1e-1274.7
NC_009523:5522447:5524445552444555255781134Roseiflexus sp. RS-1 chromosome, complete genomeDNA polymerase III subunit beta2e-1274.3
NC_009455:1025915:1029280102928010304161137Dehalococcoides sp. BAV1 chromosome, complete genomeDNA polymerase III subunit beta3e-1273.2
NC_008825:4025705:1824182429301107Methylibium petroleiphilum PM1, complete genomeDNA-directed DNA polymerase4e-1272.8
NC_011979:4293859:1736173628541119Geobacter sp. FRC-32, complete genomeDNA polymerase III, beta subunit7e-1272
NC_015859:952500:9725569725569735601005Corynebacterium variabile DSM 44702 chromosome, complete genomehypothetical protein1e-1171.2
NC_009089:1:1460146026681209Clostridium difficile 630, complete genomeDNA polymerase III, beta chain2e-1170.9
NC_002516:6255854:2056205631591104Pseudomonas aeruginosa PAO1, complete genomeDNA polymerase III subunit beta2e-1170.5
NC_007333:1:2824282439421119Thermobifida fusca YX, complete genomeDNA polymerase III subunit beta4e-1169.7
NC_007333:3626510:2824282439421119Thermobifida fusca YX, complete genomeDNA polymerase III subunit beta4e-1169.7
NC_014152:1:1645164527571113Thermincola sp. JR, complete genomeDNA polymerase III, beta subunit4e-1169.7
NC_015565:2879603:1613161327101098Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeDNA polymerase III subunit beta4e-1169.3
NC_019940:1:2384238434901107Thioflavicoccus mobilis 8321 chromosome, complete genomeDNA polymerase III subunit beta6e-1168.9
NC_015138:1:1750175028681119Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeDNA polymerase III subunit beta1e-1068.2
NC_011662:1:1813181329221110Thauera sp. MZ1T, complete genomeDNA polymerase III, beta subunit2e-1067.8
NC_020209:4768500:4770477477047747715801104Pseudomonas poae RE*1-1-14, complete genomeDNA polymerase III subunit beta3e-1067
NC_015312:1:2771277139011131Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeDNA polymerase III subunit beta3e-1067
NC_014926:6652:8315831594091095Thermovibrio ammonificans HB-1 chromosome, complete genomeDNA polymerase III, beta subunit3e-1067
NC_020829:1:1563156326691107Pseudomonas denitrificans ATCC 13867, complete genomeDNA polymerase III subunit beta2e-1067
NC_014323:1:2012201231181107Herbaspirillum seropedicae SmR1 chromosome, complete genomeDNA polymerase III subunit beta3e-1066.6
NC_013093:1:2628262837641137Actinosynnema mirum DSM 43827, complete genomeDNA polymerase III, beta subunit7e-1065.5
NC_014210:5752651:3397339745361140Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,DNA polymerase III, beta subunit9e-1065.1
NC_014392:2513529:3941394150471107Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeDNA polymerase III, beta subunit1e-0965.1
NC_009076:75535:99928999281010311104Burkholderia pseudomallei 1106a chromosome I, complete sequenceDNA polymerase III, beta subunit2e-0964.3
NC_020291:1:1718171828181101Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeDNA polymerase III subunit beta2e-0964.3
NC_012785:1988527:2003959200395920050621104Kosmotoga olearia TBF 19.5.1, complete genomeDNA polymerase III, beta subunit2e-0964.3
NC_006513:1695487:1695487169548716965901104Azoarcus sp. EbN1, complete genomeDNA polymerase III (Beta chain)2e-0964.3
NC_013165:3146000:1741174128381098Slackia heliotrinireducens DSM 20476, complete genomeDNA polymerase III, beta subunit2e-0963.9
NC_009659:1:1732173228381107Janthinobacterium sp. Marseille chromosome, complete genomeDNA polymerase III subunit beta2e-0963.5
NC_014654:1:1760176028751116Halanaerobium sp. 'sapolanicus' chromosome, complete genomeDNA polymerase III, beta subunit3e-0963.5
NC_014315:3319865:2046204631491104Nitrosococcus watsoni C-113 chromosome, complete genomeDNA polymerase III subunit beta3e-0963.2
NC_014328:1:1710171028131104Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeDNA polymerase III subunit beta5e-0962.8
NC_013204:3613824:3231323143311101Eggerthella lenta DSM 2243, complete genomeDNA polymerase III, beta subunit5e-0962.8
NC_015275:1:1617161727231107Clostridium lentocellum DSM 5427 chromosome, complete genomeDNA polymerase III, beta subunit4e-0962.8
NC_008262:1:1903190330031101Clostridium perfringens SM101, complete genomeDNA polymerase III, beta subunit5e-0962.4
NC_003366:1:2078207831781101Clostridium perfringens str. 13, complete genomeDNA polymerase III subunit beta5e-0962.4
NC_008261:1:2079207931791101Clostridium perfringens ATCC 13124, complete genomeDNA polymerase III, beta subunit5e-0962.4
NC_002947:8394:1110311103122061104Pseudomonas putida KT2440, complete genomeDNA polymerase III subunit beta6e-0962.4
NC_009512:1:1943194330461104Pseudomonas putida F1, complete genomeDNA polymerase III, beta subunit6e-0962.4
NC_014307:1:2233223333481116Ralstonia solanacearum CFBP2957 chromosome, complete genomeDNA polymerase III subunit beta6e-0962.4
NC_017075:1:1674167427831110Rubrivivax gelatinosus IL144, complete genomeDNA polymerase III beta subunit DnaN8e-0962
NC_010322:1:2725272538281104Pseudomonas putida GB-1 chromosome, complete genomeDNA polymerase III subunit beta9e-0961.6
NC_012560:5338707:1566156626691104Azotobacter vinelandii DJ, complete genomeDNA polymerase III, beta chain 1, 2, and 3 protein1e-0861.6
NC_007498:3655304:1680168027981119Pelobacter carbinolicus DSM 2380, complete genomeDNA polymerase III, beta subunit1e-0861.6
NC_013410:1651000:1653772165377216548931122Fibrobacter succinogenes subsp. succinogenes S85 chromosome,DNA polymerase III subunit beta1e-0861.2
NC_009706:1:1615161527181104Clostridium kluyveri DSM 555 chromosome, complete genomeDNA polymerase III subunit beta2e-0860.8
NC_011837:1:1615161527181104Clostridium kluyveri NBRC 12016, complete genomeDNA polymerase III subunit beta2e-0860.8
NC_015136:1:1990199030931104Burkholderia sp. CCGE1001 chromosome 1, complete sequenceDNA polymerase III subunit beta2e-0860.8
NC_015856:1:1726172628321107Collimonas fungivorans Ter331 chromosome, complete genomeDNA polymerase III subunit beta2e-0860.8
NC_014539:1:2201220133041104Burkholderia sp. CCGE1003 chromosome 1, complete sequenceDNA polymerase III subunit beta2e-0860.5
NC_003295:3688000:3713315371331537144301116Ralstonia solanacearum GMI1000, complete genomeDNA polymerase III subunit beta2e-0860.5
NC_010501:1:1962196230651104Pseudomonas putida W619, complete genomeDNA polymerase III, beta subunit3e-0860.5
NC_009922:1:1642164227481107Alkaliphilus oremlandii OhILAs, complete genomeDNA polymerase III, beta subunit3e-0860.5
NC_014311:1:2137213732521116Ralstonia solanacearum PSI07 chromosome, complete genomeDNA polymerase III, beta-subunit3e-0860.1
NC_014378:525717:1966196630631098Acetohalobium arabaticum DSM 5501 chromosome, complete genomeDNA polymerase III, beta subunit3e-0860.1
NC_007347:1:2393239335081116Ralstonia eutropha JMP134 chromosome 1, complete sequenceDNA polymerase III subunit beta4e-0859.7
NC_008702:1:1502150226111110Azoarcus sp. BH72, complete genomeDNA-directed DNA polymerase4e-0859.3
NC_015572:1:1571157126741104Methylomonas methanica MC09 chromosome, complete genomeDNA polymerase III subunit beta7e-0858.9
NC_014498:1:1717171728531137Streptococcus pneumoniae 670-6B chromosome, complete genomeDNA polymerase III subunit beta8e-0858.9
NC_014251:243700:2474422474422485781137Streptococcus pneumoniae TCH8431/19A chromosome, complete genomeDNA-directed DNA polymerase8e-0858.9
NC_012856:1:2479247935941116Ralstonia pickettii 12D chromosome 1, complete genomeDNA polymerase III, beta subunit9e-0858.5
NC_010682:1:2194219433091116Ralstonia pickettii 12J chromosome 1, complete sequenceDNA polymerase III, beta subunit9e-0858.5
NC_021182:1:2006200631061101Clostridium pasteurianum BC1, complete genomeDNA polymerase III, beta subunit9e-0858.5
NC_010577:2513241:1638163827381101Xylella fastidiosa M23, complete genomeDNA polymerase III, beta subunit1e-0758.2
NC_010577:1:1638163827381101Xylella fastidiosa M23, complete genomeDNA polymerase III, beta subunit1e-0758.2
NC_004556:1:1747174728471101Xylella fastidiosa Temecula1, complete genomeDNA polymerase III subunit beta1e-0758.2
NC_002488:1:1759175928591101Xylella fastidiosa 9a5c, complete genomeDNA polymerase III subunit beta1e-0758.2
NC_002488:2657274:1759175928591101Xylella fastidiosa 9a5c, complete genomeDNA polymerase III subunit beta1e-0758.2
NC_008576:4701930:1570157027001131Magnetococcus sp. MC-1, complete genomeDNA polymerase III, beta subunit1e-0758.2
NC_012469:1:1717171728531137Streptococcus pneumoniae Taiwan19F-14, complete genomeDNA polymerase III, beta subunit1e-0758.2
NC_014550:3839389:2256225633831128Arthrobacter arilaitensis Re117, complete genomeDNA polymerase III subunit beta2e-0757.8
NC_015942:3185193:1880188029771098Acidithiobacillus ferrivorans SS3 chromosome, complete genomeDNA polymerase III subunit beta1e-0757.8
NC_010681:1:2157215732601104Burkholderia phytofirmans PsJN chromosome 1, complete sequenceDNA polymerase III, beta subunit1e-0757.8
NC_010516:1:1638163827411104Clostridium botulinum B1 str. Okra, complete genomeDNA polymerase III, beta chain1e-0757.8
NC_012563:1:1757175728601104Clostridium botulinum A2 str. Kyoto, complete genomeDNA polymerase III, beta chain1e-0757.8
NC_009699:1:1601160127041104Clostridium botulinum F str. Langeland chromosome, complete genomeDNA polymerase III subunit beta1e-0757.8
NC_017297:1:1601160127041104Clostridium botulinum F str. 230613 chromosome, complete genomeDNA polymerase III subunit beta1e-0757.8
NC_010172:5447189:1870187029911122Methylobacterium extorquens PA1, complete genomeDNA polymerase III, beta subunit2e-0757.4
NC_010516:2328288:2334618233461823363031686Clostridium botulinum B1 str. Okra, complete genomeC-5 cytosine-specific DNA methylase2e-0757.4
NC_009495:1:1610161027131104Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeDNA polymerase III subunit beta2e-0757.4
NC_009697:1:1610161027131104Clostridium botulinum A str. ATCC 19397 chromosome, completeDNA polymerase III subunit beta2e-0757.4
NC_009698:1:1610161027131104Clostridium botulinum A str. Hall chromosome, complete genomeDNA polymerase III subunit beta2e-0757.4
NC_014150:1099507:1103040110304011041671128Brachyspira murdochii DSM 12563 chromosome, complete genomeDNA polymerase III, beta subunit2e-0757.4
NC_010674:1:1806180629061101Clostridium botulinum B str. Eklund 17B, complete genomeDNA polymerase III, beta subunit3e-0757
NC_011886:4376261:2127212732511125Arthrobacter chlorophenolicus A6, complete genomeDNA polymerase III, beta subunit3e-0757
NC_003888:4251867:4268713426871342698431131Streptomyces coelicolor A3(2), complete genomeDNA polymerase III subunit beta3e-0756.6
NC_015759:760671:7831967831967843261131Weissella koreensis KACC 15510 chromosome, complete genomeDNA polymerase III subunit beta4e-0756.6
NC_015687:1:2064206431641101Clostridium acetobutylicum DSM 1731 chromosome, complete genomeDNA polymerase III subunit beta5e-0756.2
NC_003030:1:2064206431641101Clostridium acetobutylicum ATCC 824, complete genomeDNA polymerase III subunit beta5e-0756.2
NC_006361:4149701:4158604415860441597491146Nocardia farcinica IFM 10152, complete genomeDNA polymerase III subunit beta6e-0755.8
NC_013205:1123280:1147503114750311486121110Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,DNA polymerase III, beta subunit6e-0755.8
NC_013595:10329633:2672267238111140Streptosporangium roseum DSM 43021, complete genomeDNA-directed DNA polymerase8e-0755.5
NC_011757:5742290:3266326643871122Methylobacterium chloromethanicum CM4, complete genomeDNA polymerase III, beta subunit7e-0755.5
NC_015067:2371428:2239223933631125Bifidobacterium longum subsp. longum JCM 1217, complete genomeDNA polymerase III beta subunit7e-0755.5
NC_004307:1620500:1622403162240316235271125Bifidobacterium longum NCC2705, complete genomeDNA polymerase III subunit beta7e-0755.5
NC_015052:2383865:2239223933631125Bifidobacterium longum subsp. infantis 157F, complete genomeDNA polymerase III subunit beta7e-0755.5
NC_010816:1660066:1664070166407016651941125Bifidobacterium longum DJO10A, complete genomeDNA polymerase sliding clamp subunit7e-0755.5
NC_014656:1634397:1638401163840116395251125Bifidobacterium longum subsp. longum BBMN68 chromosome, completednan7e-0755.5
NC_017221:2268276:2270009227000922711331125Bifidobacterium longum subsp. longum KACC 91563 chromosome,DNA polymerase III subunit beta7e-0755.5
NC_015145:4232283:2347234734711125Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomeDNA polymerase III subunit beta7e-0755.5
NC_010520:1:1614161427171104Clostridium botulinum A3 str. Loch Maree, complete genomeDNA polymerase III, beta chain7e-0755.5
NC_013510:1:2867286739941128Thermomonospora curvata DSM 43183, complete genomeDNA polymerase III, beta subunit6e-0755.5
NC_008541:4679022:1965196530891125Arthrobacter sp. FB24 chromosome 1, complete sequenceDNA polymerase III, beta subunit1e-0655.1
NC_012658:1:1773177328761104Clostridium botulinum Ba4 str. 657 chromosome, complete genomeDNA polymerase III subunit beta1e-0655.1
NC_005085:1:1691169128001110Chromobacterium violaceum ATCC 12472, complete genomeDNA polymerase III subunit beta1e-0654.7
NC_010723:1:1758175828581101Clostridium botulinum E3 str. Alaska E43, complete genomeDNA polymerase III, beta subunit2e-0654.3
NC_011567:1:1901190130371137Anoxybacillus flavithermus WK1, complete genomeDNA polymerase sliding clamp subunit2e-0653.9
NC_014171:1:1802180229471146Bacillus thuringiensis BMB171 chromosome, complete genomeDNA polymerase III subunit beta4e-0653.1
NC_013929:5135285:5137597513759751387271131Streptomyces scabiei 87.22 chromosome, complete genomeDNA polymerase III subunit beta4e-0653.1
NC_008711:4579997:1995199531191125Arthrobacter aurescens TC1, complete genomeDNA polymerase III, beta subunit4e-0653.1
NC_018750:3964784:3969808396980839709381131Streptomyces venezuelae ATCC 10712, complete genomeDNA polymerase III beta subunit4e-0653.1
NC_017208:1:1802180229471146Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeDNA polymerase III subunit beta4e-0653.1
NC_015389:2101841:3292329243951104Coriobacterium glomerans PW2 chromosome, complete genomeDNA polymerase III, beta subunit3e-0653.1
NC_018012:3102215:3122353312235331234531101Thiocystis violascens DSM 198 chromosome, complete genomeDNA polymerase III subunit beta6e-0652.4
NC_009952:3522370:3546223354622335473411119Dinoroseobacter shibae DFL 12, complete genomeDNA polymerase III subunit beta7e-0652.4
NC_013854:3126385:3126385312638531275151131Azospirillum sp. B510, complete genomeDNA polymerase III subunit beta7e-0652
NC_015125:1597600:1601432160143216025891158Microbacterium testaceum StLB037, complete genomeDNA polymerase sliding clamp subunit7e-0652
NC_020300:131782:1400691400691411901122Bartonella australis Aust/NH1, complete genomeDNA polymerase III subunit beta9e-0652