Pre_GI: BLASTP Hits

Some Help

Query: NC_009439:918534:929546 Pseudomonas mendocina ymp, complete genome

Start: 929546, End: 930211, Length: 666

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009439:918534:930286930286931029744Pseudomonas mendocina ymp, complete genomehypothetical protein1e-107389
NC_009656:4079319:408841340884134089207795Pseudomonas aeruginosa PA7 chromosome, complete genomelipoprotein2e-1892.4
NC_009656:4079319:408654040865404087331792Pseudomonas aeruginosa PA7 chromosome, complete genomelipoprotein2e-1685.9
NC_004578:3921199:393247239324723933272801Pseudomonas syringae pv. tomato str. DC3000, complete genomelipoprotein, putative3e-1685.5
NC_009656:4079319:408747540874754088269795Pseudomonas aeruginosa PA7 chromosome, complete genomelipoprotein3e-1685.1