Pre_GI: BLASTP Hits

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Query: NC_009439:918534:927359 Pseudomonas mendocina ymp, complete genome

Start: 927359, End: 929539, Length: 2181

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004578:3921199:3933269393326939355452277Pseudomonas syringae pv. tomato str. DC3000, complete genomelipase family protein6e-115415
NC_009656:4079319:4084306408430640859251620Pseudomonas aeruginosa PA7 chromosome, complete genomelipase family protein9e-82305
NC_002505:1507860:1514611151461115165361926Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein2e-26121
NC_012578:1465302:1472053147205314739781926Vibrio cholerae M66-2 chromosome I, complete sequencehypothetical protein2e-26121
NC_012668:2115228:2127535212753521294601926Vibrio cholerae MJ-1236 chromosome 1, complete sequencelipase family protein2e-26121
NC_016445:984856:9916069916069935311926Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein2e-26121
NC_016944:1504888:1511639151163915135641926Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein2e-26121
NC_009457:1068000:1073032107303210749571926Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein2e-26121
NC_013892:1457500:1469935146993514718091875Xenorhabdus bovienii SS-2004 chromosome, complete genomelipase protein6e-1996.7
NC_010067:51000:6254462544646072064Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-1482.4
NC_016626:1825845:182984618298461830703858Burkholderia sp. YI23 plasmid byi_1p, complete sequenceputative lipase3e-1274.3
NC_013720:5769910:5814993581499358160931101Pirellula staleyi DSM 6068, complete genomelipase class 34e-1170.5
NC_014171:4681822:470114347011434701865723Bacillus thuringiensis BMB171 chromosome, complete genomelipase2e-1068.6
NC_011725:4799905:481870048187004819422723Bacillus cereus B4264 chromosome, complete genomelipase2e-1068.6
NC_004722:4767294:478552847855284786250723Bacillus cereus ATCC 14579, complete genomeLipase2e-1068.6
NC_012491:4231469:423759042375904238408819Brevibacillus brevis NBRC 100599, complete genomehypothetical protein4e-1067
NC_011969:4556296:457576345757634576449687Bacillus cereus Q1 chromosome, complete genomelipase family protein1e-0965.9
NC_003909:4614789:463250946325094633231723Bacillus cereus ATCC 10987, complete genomelipase family protein1e-0965.9
NC_011658:4616933:463442146344214635143723Bacillus cereus AH187 chromosome, complete genomelipase family protein1e-0965.9
NC_012491:4231469:423672142367214237551831Brevibacillus brevis NBRC 100599, complete genomehypothetical protein3e-0964.3
NC_016779:4588000:460751246075124608234723Bacillus cereus F837/76 chromosome, complete genomelipase1e-0862.4
NC_013960:804567:821739821739822692954Nitrosococcus halophilus Nc4 chromosome, complete genomelipase class 37e-0859.7
NC_013406:5020690:503685250368525037664813Paenibacillus sp. Y412MC10 chromosome, complete genomelipase class 38e-0756.2