Pre_GI: BLASTP Hits

Some Help

Query: NC_009439:918534:923928 Pseudomonas mendocina ymp, complete genome

Start: 923928, End: 924815, Length: 888

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010159:1710268:172757617275761728427852Yersinia pestis Angola, complete genomeRIO1 family protein kinase4e-102370
NC_008149:2652825:267023026702302671081852Yersinia pestis Nepal516, complete genomehypothetical protein4e-102370
NC_003143:1973867:197896119789611979812852Yersinia pestis CO92, complete genomehypothetical protein4e-102370
NC_014733:2851984:685268527727876Methylovorus sp. MP688 chromosome, complete genomehypothetical protein2e-101368
NC_008800:1942000:194380419438041944652849Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein2e-100365
NC_009436:3367194:338666233866623387516855Enterobacter sp. 638, complete genomehypothetical protein4e-99361
NC_014800:329861:349619349619350473855Pseudoalteromonas sp. SM9913 chromosome chromosome II, completeputative kinase2e-97355
NC_014924:2840310:285335428533542854211858Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeRIO-like kinase5e-93340
NC_013922:2110894:213161521316152132490876Natrialba magadii ATCC 43099 chromosome, complete genomeRIO-like kinase5e-21102
NC_015562:1816000:181872518187251819543819Methanotorris igneus Kol 5 chromosome, complete genomeNon-specific serine/threonine protein kinase8e-1994.4
NC_017954:345430:365157365157365939783Thermogladius cellulolyticus 1633 chromosome, complete genomeNon-specific serine/threonine protein kinase1e-1687
NC_014961:1071424:107284110728411073656816Desulfurococcus mucosus DSM 2162 chromosome, complete genomeNon-specific serine/threonine protein kinase1e-1687
NC_003551:478065:478065478065478856792Methanopyrus kandleri AV19, complete genomePredicted serine/threonine protein kinase2e-1686.7
NC_014804:401313:415700415700416470771Thermococcus barophilus MP chromosome, complete genomehypothetical protein2e-1583.2
NC_019942:1078837:110817911081791108943765Aciduliprofundum sp. MAR08-339, complete genomeserine/threonine protein kinase involved in cell cycle control7e-1478.2
NC_002689:1228061:123202912320291232784756Thermoplasma volcanium GSS1, complete genomePredicted serine/threonine protein kinase8e-1477.8
NC_016885:237682:243276243276244082807Pyrobaculum oguniense TE7 chromosome, complete genomeSerine/threonine protein kinase involved in cell cycle control9e-1477.8
NC_005877:284829:284084284084284851768Picrophilus torridus DSM 9790, complete genomeserine/threonine protein kinase2e-1377
NC_009376:1633283:165530716553071656113807Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomehypothetical protein2e-1377
NC_005213:202400:408446408446409198753Nanoarchaeum equitans Kin4-M, complete genomehypothetical protein4e-1375.9
NC_005213:384998:408446408446409198753Nanoarchaeum equitans Kin4-M, complete genomehypothetical protein4e-1375.9
NC_005213:384998:221768221768409281187514Nanoarchaeum equitans Kin4-M, complete genometRNA-His1e-1273.9
NC_005213:295994:221768221768409281187514Nanoarchaeum equitans Kin4-M, complete genometRNA-His1e-1273.9
NC_005213:202400:221768221768409281187514Nanoarchaeum equitans Kin4-M, complete genometRNA-His1e-1273.9
NC_015416:1103900:111959611195961120465870Methanosaeta concilii GP-6 chromosome, complete genomeserine/threonine protein kinase RIO2 (RIO kinase 2)1e-1170.5
NC_019792:2416000:241884724188472419755909Natronobacterium gregoryi SP2 chromosome, complete genomefused RIO-like serine/threonine protein kinase/HTH domain-containing protein3e-1066.2
NC_015315:1584890:160125116012511602186936Thermoproteus uzoniensis 768-20 chromosome, complete genomeRIO-like serine/threonine protein kinase1e-0963.9
NC_013156:471978:482281482281483111831Methanocaldococcus fervens AG86, complete genomeNon-specific serine/threonine protein kinase2e-0963.5
NC_015320:409949:433685433685434563879Archaeoglobus veneficus SNP6 chromosome, complete genomeNon-specific serine/threonine protein kinase4e-0962.4
NC_015680:1108971:111009411100941111032939Pyrococcus yayanosii CH1 chromosome, complete genomeserine/threonine protein kinase6e-0961.6
NC_015474:1035834:105375410537541054698945Pyrococcus sp. NA2 chromosome, complete genomehypothetical protein2e-0860.1
NC_016070:1448488:145654114565411457473933Thermoproteus tenax Kra 1, complete genomeRIO-like serine/threonine protein kinase fused to N-terminal HTH domain2e-0859.7
NC_015562:1081826:108585910858591086713855Methanotorris igneus Kol 5 chromosome, complete genomeNon-specific serine/threonine protein kinase9e-0857.8
NC_009776:1249350:125492212549221255809888Ignicoccus hospitalis KIN4/I, complete genomeprotein of unknown function RIO19e-0857.8
NC_014804:803510:827141827141828106966Thermococcus barophilus MP chromosome, complete genomehypothetical protein1e-0757
NC_003364:359500:373672373672374592921Pyrobaculum aerophilum str. IM2, complete genomehypothetical protein3e-0756.2
NC_009073:1934715:195105019510501951958909Pyrobaculum calidifontis JCM 11548, complete genomeprotein of unknown function RIO12e-0653.1