Pre_GI: BLASTP Hits

Some Help

Query: NC_009439:860571:865343 Pseudomonas mendocina ymp, complete genome

Start: 865343, End: 865891, Length: 549

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015410:969526:971272971272971826555Pseudomonas mendocina NK-01 chromosome, complete genomeMOSC domain-containing protein7e-76282
NC_005773:951744:955335955335955868534Pseudomonas syringae pv. phaseolicola 1448A, complete genomeMOSC domain protein2e-59228
NC_015556:4074367:409664940966494097176528Pseudomonas fulva 12-X chromosome, complete genomeMOSC domain containing protein2e-59228
NC_007778:2875973:287597328759732876470498Rhodopseudomonas palustris HaA2, complete genomeMOSC1e-34145
NC_009656:5297000:531680753168075317247441Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein3e-34144
NC_018080:5070687:508807950880795088513435Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein8e-34143
NC_018868:3036205:303933430393343039822489Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomealpha amylase domain-containing protein4e-32137
NC_017506:2993679:299695529969552997371417Marinobacter adhaerens HP15 chromosome, complete genomeMOSC domain-containing protein5e-31134
NC_014221:591785:591785591785592342558Truepera radiovictrix DSM 17093 chromosome, complete genomeMOSC domain containing protein3e-28124
NC_012526:4462:768276828113432Deinococcus deserti VCD115, complete genomehypothetical protein8e-26116
NC_017955:1506221:152155115215511522090540Modestobacter marinus, complete genomehypothetical protein5e-1373.9
NC_015145:92397:935999359994171573Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomehypothetical protein5e-0960.8
NC_013757:1544348:158030615803061580842537Geodermatophilus obscurus DSM 43160, complete genomeMOSC domain containing protein4e-0857.8
NC_009659:997779:100877810087781009272495Janthinobacterium sp. Marseille chromosome, complete genomehypothetical protein5e-0857.4
NC_016943:4194002:422105242210524221579528Blastococcus saxobsidens DD2, complete genomehypothetical protein1e-0652.8