Pre_GI: BLASTP Hits

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Query: NC_009439:860571:863291 Pseudomonas mendocina ymp, complete genome

Start: 863291, End: 863366, Length: 76

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007005:830467:83537283537283544776Pseudomonas syringae pv. syringae B728a, complete genometRNA-Lys1e-0651.6
NC_015556:4074367:40989984098998409907376Pseudomonas fulva 12-X chromosome, complete genometRNA-Lys1e-0651.6
NC_004129:5481629:54935115493511549358676Pseudomonas fluorescens Pf-5, complete genometRNA-Lys1e-0651.6
NC_004578:4465247:44764344476434447650976Pseudomonas syringae pv. tomato str. DC3000, complete genometRNA-Lys1e-0651.6
NC_004578:895019:89897289897289904776Pseudomonas syringae pv. tomato str. DC3000, complete genometRNA-Lys1e-0651.6
NC_005773:866157:87106387106387113876Pseudomonas syringae pv. phaseolicola 1448A, complete genometRNA-Lys1e-0651.6
NC_008027:4953432:49761584976158497623376Pseudomonas entomophila L48, complete genometRNA-Lys1e-0651.6
NC_018080:4465618:44791734479173447924876Pseudomonas aeruginosa DK2 chromosome, complete genometRNA-Lys7e-0649.3
NC_002516:1031386:10603561060356106043176Pseudomonas aeruginosa PAO1, complete genometRNA-Lys7e-0649.3